Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is cbiQ

Identifier: 197294276

GI number: 197294276

Start: 164912

End: 165760

Strand: Reverse

Name: cbiQ

Synonym: PAa_0139

Alternate gene names: NA

Gene position: 165760-164912 (Counterclockwise)

Preceding gene: 197294277

Following gene: 197294272

Centisome position: 18.84

GC content: 24.03

Gene sequence:

>849_bases
ATGAATCAAAATTTTATTTTTAAATATCAAAAACAAAAAAATTTTATTTACCAAATTCAAGGAGCCACTAAATTATTTTT
TTTGCTTTTGGTTTCAATTGCTTGCATGTTGATTTATAATATTTGGTTTTTGCTTGGCATGTCCGTTTTCAATTCTTTTT
TATTTTTGTGTGCGCAAATTAAATGGAGGCAAGTGGAAAAAATAATTAAAGGTTTTTTGCTTTTCTTGTTGATTAACAAC
CTTATTATTTTTTTATTTTTTAGGAAACAAGGAATAGAAATATATCAATCTCAAACTTGGATTTTGAAAAATTTTATTAC
CCAAGAACAAATTTTTTATCAAATAAATTTGATTTTAAAATATTTGTCCGTTATTCCTTTATTTTTGATTTTTATTTTCA
CCACAAACCCCAGTGAATTAGCAGCTAGTTTAAACAAATGGGGAATTAGTTATAAAATTAGTTATTCTTTAGCTTTGACT
TTACGTTATATTCCTGCAATTAAAAAAGATTTTGAAAATATTTCTTTAACACAACAAACTCGTCTGTTGCCTGCATCTCC
AAAAGGTAATTTTATCAGCAAAATTGTTTCAAAAATCAAAAAACTTACCCTTATTATTCCTTCTTTAATTTTTGTGAATT
TAGATAAAATTGAGATTATTGGTAATGCTATGGAATTAAGACGTTTTGGAAAAAACAAAAAAAGAACTTGGTATTATCAA
ACAAAATTAACTTTTTTAGATGTATTAACAATTTTTTTAGGAGTTCATTTATTATTTTTAAGTATTTTTTTATTGATGGA
ATACGGAAGATTTTATTATCCTTTTGTCAAAAAAACCCCTTCAAATTAG

Upstream 100 bases:

>100_bases
ACTTAAAAGATCATGCTTTCTTGTTTTTCTTGAATAAATTACAAATGCAACCACAAACAAAAACCAATTTTATGAAATAT
ATCAAGGAACATTGTTTTAA

Downstream 100 bases:

>100_bases
AAAAGGGGGTTATTTAAAATCAACTTGTTTTACAAATGATTTTTGTTATTTTGAGAATGCAAAATAGGAAAAATGACGAA
AGATAATTTTTTTAAATTTC

Product: ABC-type cobalt transport system,permease protein

Products: NA

Alternate protein names: Cobalt Transport Family Protein; ABC-Type Cobalt Transport System Permease Component CbiQ; ABC Transporter Permease; ABC-Type Cobalt Transport System; ABC Transporter; Cobalt ABC Transporter Permease Protein; Cobalt Transport Protein CbiQ; Cobalt Transporter; Cobalt ABC Transporter Permease; ABC Transporter Transmembrane Protein; Cobalt ABC Transporter; Cobalt ABC Transporter Permease Component; ABC-Type Cobalt Transport System Permease Protein; ABC Transporter Membrane-Spanning Permease; Cobalt Permease; Cobalt Transporter Superfamily

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MNQNFIFKYQKQKNFIYQIQGATKLFFLLLVSIACMLIYNIWFLLGMSVFNSFLFLCAQIKWRQVEKIIKGFLLFLLINN
LIIFLFFRKQGIEIYQSQTWILKNFITQEQIFYQINLILKYLSVIPLFLIFIFTTNPSELAASLNKWGISYKISYSLALT
LRYIPAIKKDFENISLTQQTRLLPASPKGNFISKIVSKIKKLTLIIPSLIFVNLDKIEIIGNAMELRRFGKNKKRTWYYQ
TKLTFLDVLTIFLGVHLLFLSIFLLMEYGRFYYPFVKKTPSN

Sequences:

>Translated_282_residues
MNQNFIFKYQKQKNFIYQIQGATKLFFLLLVSIACMLIYNIWFLLGMSVFNSFLFLCAQIKWRQVEKIIKGFLLFLLINN
LIIFLFFRKQGIEIYQSQTWILKNFITQEQIFYQINLILKYLSVIPLFLIFIFTTNPSELAASLNKWGISYKISYSLALT
LRYIPAIKKDFENISLTQQTRLLPASPKGNFISKIVSKIKKLTLIIPSLIFVNLDKIEIIGNAMELRRFGKNKKRTWYYQ
TKLTFLDVLTIFLGVHLLFLSIFLLMEYGRFYYPFVKKTPSN
>Mature_282_residues
MNQNFIFKYQKQKNFIYQIQGATKLFFLLLVSIACMLIYNIWFLLGMSVFNSFLFLCAQIKWRQVEKIIKGFLLFLLINN
LIIFLFFRKQGIEIYQSQTWILKNFITQEQIFYQINLILKYLSVIPLFLIFIFTTNPSELAASLNKWGISYKISYSLALT
LRYIPAIKKDFENISLTQQTRLLPASPKGNFISKIVSKIKKLTLIIPSLIFVNLDKIEIIGNAMELRRFGKNKKRTWYYQ
TKLTFLDVLTIFLGVHLLFLSIFLLMEYGRFYYPFVKKTPSN

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33393; Mature: 33393

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQNFIFKYQKQKNFIYQIQGATKLFFLLLVSIACMLIYNIWFLLGMSVFNSFLFLCAQI
CCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KWRQVEKIIKGFLLFLLINNLIIFLFFRKQGIEIYQSQTWILKNFITQEQIFYQINLILK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLSVIPLFLIFIFTTNPSELAASLNKWGISYKISYSLALTLRYIPAIKKDFENISLTQQT
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHH
RLLPASPKGNFISKIVSKIKKLTLIIPSLIFVNLDKIEIIGNAMELRRFGKNKKRTWYYQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEE
TKLTFLDVLTIFLGVHLLFLSIFLLMEYGRFYYPFVKKTPSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHCCCCC
>Mature Secondary Structure
MNQNFIFKYQKQKNFIYQIQGATKLFFLLLVSIACMLIYNIWFLLGMSVFNSFLFLCAQI
CCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KWRQVEKIIKGFLLFLLINNLIIFLFFRKQGIEIYQSQTWILKNFITQEQIFYQINLILK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLSVIPLFLIFIFTTNPSELAASLNKWGISYKISYSLALTLRYIPAIKKDFENISLTQQT
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHH
RLLPASPKGNFISKIVSKIKKLTLIIPSLIFVNLDKIEIIGNAMELRRFGKNKKRTWYYQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEE
TKLTFLDVLTIFLGVHLLFLSIFLLMEYGRFYYPFVKKTPSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA