| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294275
Identifier: 197294275
GI number: 197294275
Start: 160972
End: 163845
Strand: Direct
Name: 197294275
Synonym: PAa_0138
Alternate gene names: NA
Gene position: 160972-163845 (Clockwise)
Preceding gene: 197294274
Following gene: 197294282
Centisome position: 18.29
GC content: 26.27
Gene sequence:
>2874_bases TTGAAAAGAATTAATTATTATCGCAAATTTGTCCTTTTTTTTGGAATATCCTTATTTTTATTTATTGGTTTTATTCAGTT GATCAATTACCCTAGAAATACATGCACTCATCACAATTCTTTATTATCTTCTTCATCAAAGATAAACTTAAAAACTAATC CTTCAGATAATAAAGAATTAGAATTGCAAAAGAAACAATTCAAAGTTCAACTAAGAGCAGAAGAAGAAGAACAAGCCAAA AAAATAAAAAATAATAGAAATAAATTATGTCTTTTAAAATCATCTAATAATGAATTGGCTTTAGGTGTGATTGTTGACAA AGAAGAGGATGACCTTTTAAAAAAATATTGGGTTCTCGCTCCAAAAAACACAACCCCCTTTCCAAAAGAAAATACCGCCG TTTTAAATGTTACAATTCAATTCATGGATAAAATTGATAACGAAAAAGGACAATGGATTAAAGAAGATGCTTTGCCAGAA AAATTAGAAAAATTCAGGGATAATTTTGACATTCTTTTTTTTAAAACAAAAAAAGATTACGAAATTAATCCAATTCGTAA AAATGAATATTATCAAGGACAAAGATTGCAAACTTTTGTTTTGAATCCTTATGCTTTAGTAGTTTTTCAAGAAAGTTATG TGAGCGAAAATTATTTATTAAAACAAGATGAAAACACGCCAATTCCTGTTTTTGGCCGCAATCATTCTTTAAATAAACAA ACGGTTTTTTTCACAGAAGAAGGTGATTTAGTAGGTTTTTTAGCTCCTGCCCAAAACAAAAATGAAAAAGGAGTAAAATA CTTAAAAGTCATTCCTCCTCTAGACTTAAATAATCAACTAGAAGAAAGAAAAAACCAACAAAAAATTGCACTAAATACAC CACACAAGCAAGAAGGTTCAAAAACTAATTCAAAAGACTTCCAATTATTAATAGAAAACTTAAATAAAATTACTGTTTGT ATTAACACTGGTTCTAGTTTGGGAACAGGAATTATTGTTAAAAAAGAAGATAACAAGTATGAAGGGAATAAGTATTATGT TTTAACAAATCGTCATGTAATAGAAAGTTTTTGGAATAAAAAAATTAAAAACCCTTATGACAGACATTTAATCGCTTTAA CAAATCCCAAAATAAAAGGATTCAAAGACGTTCCGGCAGAACTTTTTGCTGTGATTGGGAATAATCGCGAATATGATGAT ATCGCCATTTTAACTTTTAAAACTAGAAATGCAATCAAAGACATTGATGAAAATATTGAAAAATATATTGACTTTGAAGA AGATTCAAAAATAAATATAACTCAAGGAGAAATTGTTTATGCTTTAGGATGTCAAAAGGGATTTCAAGAAAAAATTCAAC ATTTATCATTTTTTGAATGGTTTTTTGAATTGCAGCCGCCAGAAAGAGAAGGAAAATACAAACAAAATTTATTCAAACAA GGTATTATTTCTTATTTTAATGAAAGAGAAATTAATTCTGATATGACTTTAGACCCTGGTAACAGCGGAGGGCCTCTTTT TAATTCTCAAGGACAACTAATAGGCATAAATAAAAGCTTTTATAAAAATATTCGAATTTCCCAATCTATTAATATTAATC ACGTTAAAAAACAATTTTATACTATATTGGAAGCCAAAAAGAAAAAAAATGTTCCAATTTTTGATTTACAAGAAGAAAAC AATAAAATGACTAAAGACAAAATTGAAGAATTAACAAAAGGTGTTTTTAAAAAAGAAATAAATCACCAAATCCCTTTAGA AGACTTTTATTTTTTTATTGAAAACTCCAAAGACAAAAAAATTACTTTCAAAAGCTCAGATAAAAATGATTTCGATGATT TTTTAACCATTCAACTACACGGCTTGGAATCGTTGCAATTTGTTGCCTCTCCTTTGTCGAAAAATAATATTGTAGAAATA AGTTTAGGGCTTAAAGAAAATATTTATTTTTTAAGAAGCAAAATTTATTCTTACACAAACAAATCTAGTCCTATTTATGA AGAAACTATTCGCATTAAAAGAGAAGATGCTAATAAATTATTTTTGGTTTTTAACATAAAACATTTATCTAAAGAAAATC TTTTGCAAAAGCAAAAAGACGAATTATCCCAAAAACAAACATTAATTAAAAATAAAGACATTACATTTATTAAAAAAGAA ATCTTGCAAGCTTTAGTTTTGTGTCAAAATAACCACAACAATTCTTTGGGAGTGATAATTAAAAAAGAAGTTTTAAATGA CAGAAACAATAATTTTTTATATACAGTTGTTTGCAAAAAAAACAATTTTTTCAATTTATTTAGTCCCGAAACTAAAATTA CTCTTCAAACTCCTTATGGTCTTCAAGATGAAGAAGGAAAATGTATATGTATAAACAATCTTAATTATATTACTTTTATT TCTGATAATAATTATCCTGTAGTTGAAACAAATTTCAATGAAAAAGATTTATTGTTAGGAGAGGCCCTTTATTTAATAAG TGATTGCAATGATGTTTCTGATAAAGCTTTAGCACCTCATATTTTTCAAAGTCATTTAGCGGTTGAAATAAATCCCGCAA ACCCTCAAATAATGGTAGACACAACTTTTTTAAAAGAATTTTTCATTATTGAAGATAATGAACATTATAATAATTGGTTT ATTTTTAACTCTCAAGGGAATTTAATTAATGTTTGTGATAAAAAAGATATTGCAAAAATTGATAAACAAAACTTCCCCTT TATTGTTTTTCCTAAAATGAATCTCACTTCTAAATGGTTTTGTCATGTTAACTTTATTAAAGTTTGCATTTTCATCTTTT GGACTTTTTTATGTGTTGTCGTTTTTGCTATCATGGATTATCAAAACGAAAAAAAAGGGAAATATTATTTGTAA
Upstream 100 bases:
>100_bases TTAATAACTTCTGAAGAATAATCAATTTTTTTAATATGATTCAACCTGTTTTTAAGTTAAAATATTAATGATAAATATAA AGAAACGAGTAACGATTAAA
Downstream 100 bases:
>100_bases AAAAACTGCAAACAAAAACTAACCAAAATAATTATTTTTTTTGGGTTTGAAACCAAAATAATTTAAATAATTTTTTTTGC CGTTGCTTATTTTCATTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 957; Mature: 957
Protein sequence:
>957_residues MKRINYYRKFVLFFGISLFLFIGFIQLINYPRNTCTHHNSLLSSSSKINLKTNPSDNKELELQKKQFKVQLRAEEEEQAK KIKNNRNKLCLLKSSNNELALGVIVDKEEDDLLKKYWVLAPKNTTPFPKENTAVLNVTIQFMDKIDNEKGQWIKEDALPE KLEKFRDNFDILFFKTKKDYEINPIRKNEYYQGQRLQTFVLNPYALVVFQESYVSENYLLKQDENTPIPVFGRNHSLNKQ TVFFTEEGDLVGFLAPAQNKNEKGVKYLKVIPPLDLNNQLEERKNQQKIALNTPHKQEGSKTNSKDFQLLIENLNKITVC INTGSSLGTGIIVKKEDNKYEGNKYYVLTNRHVIESFWNKKIKNPYDRHLIALTNPKIKGFKDVPAELFAVIGNNREYDD IAILTFKTRNAIKDIDENIEKYIDFEEDSKINITQGEIVYALGCQKGFQEKIQHLSFFEWFFELQPPEREGKYKQNLFKQ GIISYFNEREINSDMTLDPGNSGGPLFNSQGQLIGINKSFYKNIRISQSININHVKKQFYTILEAKKKKNVPIFDLQEEN NKMTKDKIEELTKGVFKKEINHQIPLEDFYFFIENSKDKKITFKSSDKNDFDDFLTIQLHGLESLQFVASPLSKNNIVEI SLGLKENIYFLRSKIYSYTNKSSPIYEETIRIKREDANKLFLVFNIKHLSKENLLQKQKDELSQKQTLIKNKDITFIKKE ILQALVLCQNNHNNSLGVIIKKEVLNDRNNNFLYTVVCKKNNFFNLFSPETKITLQTPYGLQDEEGKCICINNLNYITFI SDNNYPVVETNFNEKDLLLGEALYLISDCNDVSDKALAPHIFQSHLAVEINPANPQIMVDTTFLKEFFIIEDNEHYNNWF IFNSQGNLINVCDKKDIAKIDKQNFPFIVFPKMNLTSKWFCHVNFIKVCIFIFWTFLCVVVFAIMDYQNEKKGKYYL
Sequences:
>Translated_957_residues MKRINYYRKFVLFFGISLFLFIGFIQLINYPRNTCTHHNSLLSSSSKINLKTNPSDNKELELQKKQFKVQLRAEEEEQAK KIKNNRNKLCLLKSSNNELALGVIVDKEEDDLLKKYWVLAPKNTTPFPKENTAVLNVTIQFMDKIDNEKGQWIKEDALPE KLEKFRDNFDILFFKTKKDYEINPIRKNEYYQGQRLQTFVLNPYALVVFQESYVSENYLLKQDENTPIPVFGRNHSLNKQ TVFFTEEGDLVGFLAPAQNKNEKGVKYLKVIPPLDLNNQLEERKNQQKIALNTPHKQEGSKTNSKDFQLLIENLNKITVC INTGSSLGTGIIVKKEDNKYEGNKYYVLTNRHVIESFWNKKIKNPYDRHLIALTNPKIKGFKDVPAELFAVIGNNREYDD IAILTFKTRNAIKDIDENIEKYIDFEEDSKINITQGEIVYALGCQKGFQEKIQHLSFFEWFFELQPPEREGKYKQNLFKQ GIISYFNEREINSDMTLDPGNSGGPLFNSQGQLIGINKSFYKNIRISQSININHVKKQFYTILEAKKKKNVPIFDLQEEN NKMTKDKIEELTKGVFKKEINHQIPLEDFYFFIENSKDKKITFKSSDKNDFDDFLTIQLHGLESLQFVASPLSKNNIVEI SLGLKENIYFLRSKIYSYTNKSSPIYEETIRIKREDANKLFLVFNIKHLSKENLLQKQKDELSQKQTLIKNKDITFIKKE ILQALVLCQNNHNNSLGVIIKKEVLNDRNNNFLYTVVCKKNNFFNLFSPETKITLQTPYGLQDEEGKCICINNLNYITFI SDNNYPVVETNFNEKDLLLGEALYLISDCNDVSDKALAPHIFQSHLAVEINPANPQIMVDTTFLKEFFIIEDNEHYNNWF IFNSQGNLINVCDKKDIAKIDKQNFPFIVFPKMNLTSKWFCHVNFIKVCIFIFWTFLCVVVFAIMDYQNEKKGKYYL >Mature_957_residues MKRINYYRKFVLFFGISLFLFIGFIQLINYPRNTCTHHNSLLSSSSKINLKTNPSDNKELELQKKQFKVQLRAEEEEQAK KIKNNRNKLCLLKSSNNELALGVIVDKEEDDLLKKYWVLAPKNTTPFPKENTAVLNVTIQFMDKIDNEKGQWIKEDALPE KLEKFRDNFDILFFKTKKDYEINPIRKNEYYQGQRLQTFVLNPYALVVFQESYVSENYLLKQDENTPIPVFGRNHSLNKQ TVFFTEEGDLVGFLAPAQNKNEKGVKYLKVIPPLDLNNQLEERKNQQKIALNTPHKQEGSKTNSKDFQLLIENLNKITVC INTGSSLGTGIIVKKEDNKYEGNKYYVLTNRHVIESFWNKKIKNPYDRHLIALTNPKIKGFKDVPAELFAVIGNNREYDD IAILTFKTRNAIKDIDENIEKYIDFEEDSKINITQGEIVYALGCQKGFQEKIQHLSFFEWFFELQPPEREGKYKQNLFKQ GIISYFNEREINSDMTLDPGNSGGPLFNSQGQLIGINKSFYKNIRISQSININHVKKQFYTILEAKKKKNVPIFDLQEEN NKMTKDKIEELTKGVFKKEINHQIPLEDFYFFIENSKDKKITFKSSDKNDFDDFLTIQLHGLESLQFVASPLSKNNIVEI SLGLKENIYFLRSKIYSYTNKSSPIYEETIRIKREDANKLFLVFNIKHLSKENLLQKQKDELSQKQTLIKNKDITFIKKE ILQALVLCQNNHNNSLGVIIKKEVLNDRNNNFLYTVVCKKNNFFNLFSPETKITLQTPYGLQDEEGKCICINNLNYITFI SDNNYPVVETNFNEKDLLLGEALYLISDCNDVSDKALAPHIFQSHLAVEINPANPQIMVDTTFLKEFFIIEDNEHYNNWF IFNSQGNLINVCDKKDIAKIDKQNFPFIVFPKMNLTSKWFCHVNFIKVCIFIFWTFLCVVVFAIMDYQNEKKGKYYL
Specific function: Unknown
COG id: COG0265
COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 111956; Mature: 111956
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRINYYRKFVLFFGISLFLFIGFIQLINYPRNTCTHHNSLLSSSSKINLKTNPSDNKEL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEE ELQKKQFKVQLRAEEEEQAKKIKNNRNKLCLLKSSNNELALGVIVDKEEDDLLKKYWVLA EEEEEEEEEEEECCHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHEEEE PKNTTPFPKENTAVLNVTIQFMDKIDNEKGQWIKEDALPEKLEKFRDNFDILFFKTKKDY CCCCCCCCCCCCEEEEEEEEEHHHHCCCCCCEECCCCCHHHHHHHCCCCEEEEEEECCCC EINPIRKNEYYQGQRLQTFVLNPYALVVFQESYVSENYLLKQDENTPIPVFGRNHSLNKQ CCCCCCCCCCCCCCCEEEEEECCEEEEEEEHHHCCCCEEEECCCCCCCEEECCCCCCCCE TVFFTEEGDLVGFLAPAQNKNEKGVKYLKVIPPLDLNNQLEERKNQQKIALNTPHKQEGS EEEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCEEEECCCCCCCCC KTNSKDFQLLIENLNKITVCINTGSSLGTGIIVKKEDNKYEGNKYYVLTNRHVIESFWNK CCCCHHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCHHHHHHHHH KIKNPYDRHLIALTNPKIKGFKDVPAELFAVIGNNREYDDIAILTFKTRNAIKDIDENIE HHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHH KYIDFEEDSKINITQGEIVYALGCQKGFQEKIQHLSFFEWFFELQPPEREGKYKQNLFKQ HHCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH GIISYFNEREINSDMTLDPGNSGGPLFNSQGQLIGINKSFYKNIRISQSININHVKKQFY HHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCEEECCHHHHCCEEEECCCCHHHHHHHHH TILEAKKKKNVPIFDLQEENNKMTKDKIEELTKGVFKKEINHQIPLEDFYFFIENSKDKK HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCE ITFKSSDKNDFDDFLTIQLHGLESLQFVASPLSKNNIVEISLGLKENIYFLRSKIYSYTN EEEECCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCC KSSPIYEETIRIKREDANKLFLVFNIKHLSKENLLQKQKDELSQKQTLIKNKDITFIKKE CCCCCCHHHHEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ILQALVLCQNNHNNSLGVIIKKEVLNDRNNNFLYTVVCKKNNFFNLFSPETKITLQTPYG HHHHHHHHCCCCCCCEEEEEEHHHHCCCCCCEEEEEEECCCCEEEEECCCEEEEEECCCC LQDEEGKCICINNLNYITFISDNNYPVVETNFNEKDLLLGEALYLISDCNDVSDKALAPH CCCCCCCEEEECCCCEEEEEECCCCEEEECCCCCCHHHHHHHEEEEECCCCCCCHHCCCH IFQSHLAVEINPANPQIMVDTTFLKEFFIIEDNEHYNNWFIFNSQGNLINVCDKKDIAKI HHHCCEEEEEECCCCEEEEEEEEEEEEEEEECCCCCCEEEEECCCCCEEEECCCCHHHHH DKQNFPFIVFPKMNLTSKWFCHVNFIKVCIFIFWTFLCVVVFAIMDYQNEKKGKYYL CCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKRINYYRKFVLFFGISLFLFIGFIQLINYPRNTCTHHNSLLSSSSKINLKTNPSDNKEL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEE ELQKKQFKVQLRAEEEEQAKKIKNNRNKLCLLKSSNNELALGVIVDKEEDDLLKKYWVLA EEEEEEEEEEEECCHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHEEEE PKNTTPFPKENTAVLNVTIQFMDKIDNEKGQWIKEDALPEKLEKFRDNFDILFFKTKKDY CCCCCCCCCCCCEEEEEEEEEHHHHCCCCCCEECCCCCHHHHHHHCCCCEEEEEEECCCC EINPIRKNEYYQGQRLQTFVLNPYALVVFQESYVSENYLLKQDENTPIPVFGRNHSLNKQ CCCCCCCCCCCCCCCEEEEEECCEEEEEEEHHHCCCCEEEECCCCCCCEEECCCCCCCCE TVFFTEEGDLVGFLAPAQNKNEKGVKYLKVIPPLDLNNQLEERKNQQKIALNTPHKQEGS EEEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCEEEECCCCCCCCC KTNSKDFQLLIENLNKITVCINTGSSLGTGIIVKKEDNKYEGNKYYVLTNRHVIESFWNK CCCCHHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCHHHHHHHHH KIKNPYDRHLIALTNPKIKGFKDVPAELFAVIGNNREYDDIAILTFKTRNAIKDIDENIE HHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHH KYIDFEEDSKINITQGEIVYALGCQKGFQEKIQHLSFFEWFFELQPPEREGKYKQNLFKQ HHCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH GIISYFNEREINSDMTLDPGNSGGPLFNSQGQLIGINKSFYKNIRISQSININHVKKQFY HHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCEEECCHHHHCCEEEECCCCHHHHHHHHH TILEAKKKKNVPIFDLQEENNKMTKDKIEELTKGVFKKEINHQIPLEDFYFFIENSKDKK HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCE ITFKSSDKNDFDDFLTIQLHGLESLQFVASPLSKNNIVEISLGLKENIYFLRSKIYSYTN EEEECCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCC KSSPIYEETIRIKREDANKLFLVFNIKHLSKENLLQKQKDELSQKQTLIKNKDITFIKKE CCCCCCHHHHEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ILQALVLCQNNHNNSLGVIIKKEVLNDRNNNFLYTVVCKKNNFFNLFSPETKITLQTPYG HHHHHHHHCCCCCCCEEEEEEHHHHCCCCCCEEEEEEECCCCEEEEECCCEEEEEECCCC LQDEEGKCICINNLNYITFISDNNYPVVETNFNEKDLLLGEALYLISDCNDVSDKALAPH CCCCCCCEEEECCCCEEEEEECCCCEEEECCCCCCHHHHHHHEEEEECCCCCCCHHCCCH IFQSHLAVEINPANPQIMVDTTFLKEFFIIEDNEHYNNWFIFNSQGNLINVCDKKDIAKI HHHCCEEEEEECCCCEEEEEEEEEEEEEEEECCCCCCEEEEECCCCCEEEECCCCHHHHH DKQNFPFIVFPKMNLTSKWFCHVNFIKVCIFIFWTFLCVVVFAIMDYQNEKKGKYYL CCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA