Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is 197294253

Identifier: 197294253

GI number: 197294253

Start: 129593

End: 130186

Strand: Direct

Name: 197294253

Synonym: PAa_0116

Alternate gene names: NA

Gene position: 129593-130186 (Clockwise)

Preceding gene: 197294252

Following gene: 197294254

Centisome position: 14.73

GC content: 31.48

Gene sequence:

>594_bases
ATGTTATTTTCAAAAAAATCTCGTGCACATGTTATTTTTAATATTATTATTTTTGCTGTCCTTTCGATTTCATTAATAAG
TGTAATCACTTTAGATTGGCGTGCACGTAATGTTCAAAACACAAAGTCAAGTGAAGTTAGTAATTCCAGTAATATTTTTG
ATATCGTTAACGAAGGAACAATCACCGAAGGAAAATTAATTCCTAAAGGCGTTTATAAATTTACTGGTGAAGTTGATGAA
AAAGAATTTACAGTTACACTAAATAGTACATTCGCAGAAGATGTAACATTAGCTGTTAATACAACTGTAGAAGCGCAACA
ACATGGACTTGATGATGCAAACGCACAAACATTAAGAAATTTATTAAACAATGCCGTAAAGTTTCAACATTTTATGGTAG
ATACAGAAAATAAAGAAACTGCATGGAACGAAAACACACAAGTAAAAGGAGAGTTCCGCGTAAAAACAAAAGTTTGGTTA
GATGATCAAGTTTTAGGAGAACCCCAAAACCAAGCTGCCTTTAATTTGTTAAAACAAGCAGTAAATAACTCTGGTTTTAT
GCTTCAATTTAACACAACTTACGAAGCTCGTTAA

Upstream 100 bases:

>100_bases
AAATTTTTTTCATTCTTTTTTATGCAAAGGAAAGATAGGAAAATCATAAAGAACATATAACAAACTCTTTCACAATAAAA
TAAAAAAAGGAGTAATTAAA

Downstream 100 bases:

>100_bases
TTAAAATAAAATCACTAAATCCGCCAAACGGTGGTTTGCCAAGAAATAAGGAATCAAAACTTATCCCAACAACGGAAAAA
TAATTATCCTTTAAAGACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MLFSKKSRAHVIFNIIIFAVLSISLISVITLDWRARNVQNTKSSEVSNSSNIFDIVNEGTITEGKLIPKGVYKFTGEVDE
KEFTVTLNSTFAEDVTLAVNTTVEAQQHGLDDANAQTLRNLLNNAVKFQHFMVDTENKETAWNENTQVKGEFRVKTKVWL
DDQVLGEPQNQAAFNLLKQAVNNSGFMLQFNTTYEAR

Sequences:

>Translated_197_residues
MLFSKKSRAHVIFNIIIFAVLSISLISVITLDWRARNVQNTKSSEVSNSSNIFDIVNEGTITEGKLIPKGVYKFTGEVDE
KEFTVTLNSTFAEDVTLAVNTTVEAQQHGLDDANAQTLRNLLNNAVKFQHFMVDTENKETAWNENTQVKGEFRVKTKVWL
DDQVLGEPQNQAAFNLLKQAVNNSGFMLQFNTTYEAR
>Mature_197_residues
MLFSKKSRAHVIFNIIIFAVLSISLISVITLDWRARNVQNTKSSEVSNSSNIFDIVNEGTITEGKLIPKGVYKFTGEVDE
KEFTVTLNSTFAEDVTLAVNTTVEAQQHGLDDANAQTLRNLLNNAVKFQHFMVDTENKETAWNENTQVKGEFRVKTKVWL
DDQVLGEPQNQAAFNLLKQAVNNSGFMLQFNTTYEAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22209; Mature: 22209

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFSKKSRAHVIFNIIIFAVLSISLISVITLDWRARNVQNTKSSEVSNSSNIFDIVNEGT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEECCCC
ITEGKLIPKGVYKFTGEVDEKEFTVTLNSTFAEDVTLAVNTTVEAQQHGLDDANAQTLRN
CCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCEEEEEECEEHHHHCCCCCCCHHHHHH
LLNNAVKFQHFMVDTENKETAWNENTQVKGEFRVKTKVWLDDQVLGEPQNQAAFNLLKQA
HHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEEEEEEEECHHHCCCCCHHHHHHHHHHH
VNNSGFMLQFNTTYEAR
HCCCCEEEEEECCCCCC
>Mature Secondary Structure
MLFSKKSRAHVIFNIIIFAVLSISLISVITLDWRARNVQNTKSSEVSNSSNIFDIVNEGT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEECCCC
ITEGKLIPKGVYKFTGEVDEKEFTVTLNSTFAEDVTLAVNTTVEAQQHGLDDANAQTLRN
CCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCEEEEEECEEHHHHCCCCCCCHHHHHH
LLNNAVKFQHFMVDTENKETAWNENTQVKGEFRVKTKVWLDDQVLGEPQNQAAFNLLKQA
HHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEEEEEEEECHHHCCCCCHHHHHHHHHHH
VNNSGFMLQFNTTYEAR
HCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA