| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294253
Identifier: 197294253
GI number: 197294253
Start: 129593
End: 130186
Strand: Direct
Name: 197294253
Synonym: PAa_0116
Alternate gene names: NA
Gene position: 129593-130186 (Clockwise)
Preceding gene: 197294252
Following gene: 197294254
Centisome position: 14.73
GC content: 31.48
Gene sequence:
>594_bases ATGTTATTTTCAAAAAAATCTCGTGCACATGTTATTTTTAATATTATTATTTTTGCTGTCCTTTCGATTTCATTAATAAG TGTAATCACTTTAGATTGGCGTGCACGTAATGTTCAAAACACAAAGTCAAGTGAAGTTAGTAATTCCAGTAATATTTTTG ATATCGTTAACGAAGGAACAATCACCGAAGGAAAATTAATTCCTAAAGGCGTTTATAAATTTACTGGTGAAGTTGATGAA AAAGAATTTACAGTTACACTAAATAGTACATTCGCAGAAGATGTAACATTAGCTGTTAATACAACTGTAGAAGCGCAACA ACATGGACTTGATGATGCAAACGCACAAACATTAAGAAATTTATTAAACAATGCCGTAAAGTTTCAACATTTTATGGTAG ATACAGAAAATAAAGAAACTGCATGGAACGAAAACACACAAGTAAAAGGAGAGTTCCGCGTAAAAACAAAAGTTTGGTTA GATGATCAAGTTTTAGGAGAACCCCAAAACCAAGCTGCCTTTAATTTGTTAAAACAAGCAGTAAATAACTCTGGTTTTAT GCTTCAATTTAACACAACTTACGAAGCTCGTTAA
Upstream 100 bases:
>100_bases AAATTTTTTTCATTCTTTTTTATGCAAAGGAAAGATAGGAAAATCATAAAGAACATATAACAAACTCTTTCACAATAAAA TAAAAAAAGGAGTAATTAAA
Downstream 100 bases:
>100_bases TTAAAATAAAATCACTAAATCCGCCAAACGGTGGTTTGCCAAGAAATAAGGAATCAAAACTTATCCCAACAACGGAAAAA TAATTATCCTTTAAAGACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MLFSKKSRAHVIFNIIIFAVLSISLISVITLDWRARNVQNTKSSEVSNSSNIFDIVNEGTITEGKLIPKGVYKFTGEVDE KEFTVTLNSTFAEDVTLAVNTTVEAQQHGLDDANAQTLRNLLNNAVKFQHFMVDTENKETAWNENTQVKGEFRVKTKVWL DDQVLGEPQNQAAFNLLKQAVNNSGFMLQFNTTYEAR
Sequences:
>Translated_197_residues MLFSKKSRAHVIFNIIIFAVLSISLISVITLDWRARNVQNTKSSEVSNSSNIFDIVNEGTITEGKLIPKGVYKFTGEVDE KEFTVTLNSTFAEDVTLAVNTTVEAQQHGLDDANAQTLRNLLNNAVKFQHFMVDTENKETAWNENTQVKGEFRVKTKVWL DDQVLGEPQNQAAFNLLKQAVNNSGFMLQFNTTYEAR >Mature_197_residues MLFSKKSRAHVIFNIIIFAVLSISLISVITLDWRARNVQNTKSSEVSNSSNIFDIVNEGTITEGKLIPKGVYKFTGEVDE KEFTVTLNSTFAEDVTLAVNTTVEAQQHGLDDANAQTLRNLLNNAVKFQHFMVDTENKETAWNENTQVKGEFRVKTKVWL DDQVLGEPQNQAAFNLLKQAVNNSGFMLQFNTTYEAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22209; Mature: 22209
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFSKKSRAHVIFNIIIFAVLSISLISVITLDWRARNVQNTKSSEVSNSSNIFDIVNEGT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEECCCC ITEGKLIPKGVYKFTGEVDEKEFTVTLNSTFAEDVTLAVNTTVEAQQHGLDDANAQTLRN CCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCEEEEEECEEHHHHCCCCCCCHHHHHH LLNNAVKFQHFMVDTENKETAWNENTQVKGEFRVKTKVWLDDQVLGEPQNQAAFNLLKQA HHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEEEEEEEECHHHCCCCCHHHHHHHHHHH VNNSGFMLQFNTTYEAR HCCCCEEEEEECCCCCC >Mature Secondary Structure MLFSKKSRAHVIFNIIIFAVLSISLISVITLDWRARNVQNTKSSEVSNSSNIFDIVNEGT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEECCCC ITEGKLIPKGVYKFTGEVDEKEFTVTLNSTFAEDVTLAVNTTVEAQQHGLDDANAQTLRN CCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCEEEEEECEEHHHHCCCCCCCHHHHHH LLNNAVKFQHFMVDTENKETAWNENTQVKGEFRVKTKVWLDDQVLGEPQNQAAFNLLKQA HHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEEEEEEEECHHHCCCCCHHHHHHHHHHH VNNSGFMLQFNTTYEAR HCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA