Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

Click here to switch to the map view.

The map label for this gene is gpmI [H]

Identifier: 197294210

GI number: 197294210

Start: 64873

End: 66423

Strand: Direct

Name: gpmI [H]

Synonym: PAa_0060

Alternate gene names: 197294210

Gene position: 64873-66423 (Clockwise)

Preceding gene: 197294209

Following gene: 197294211

Centisome position: 7.37

GC content: 33.98

Gene sequence:

>1551_bases
GTGACCAAATTTGCTGCTTTATTAATTTTAGATGGACTAGGTTTGTCTTGTCAAAAAGAAAATAATGCTTTTTATTTAGC
AAAAACACCTTATCTTGATTATCTTTTAAAAACTTTCCCAACCACCACTCTCCAAGCATCAGGAGAAGCGGTAGGACTTC
CTGAAGGACAAATGGGAAATAGTGAAGTCGGACACCTTAATTTAGGAGCAGGTAGAGTTGTTGATCAATATTTAACTCAA
ATCAATAAATCTATTCGCGATCAATCTTTTCTTCAAAACAAACAATTTTTAAAAGCGATTGAACATGCGAAAAAAAACCA
TTCCAAAATCCACTTATTAGGATTAGTTTCTGAAGGGGGCGTTCATTCTCATTTAGATCATTTTAAAGCTTTATTAGAAT
TAATGAAAAAACACCAAATAGCAGATAAAACTTATTTACACGTTTTTACAGATGGTAGAGATGATGACCCTGTTTCAGGA
GTTAAATATCTCCAACAAATGATTGATGATGGTTTTCAGATAGCCTCTGTTAGTGGAAGGTATTATGCCCTAGACCGCGA
TAATAATTGGGACCGCATTAATTTAGTTTATGATATGTTAACTTTAGGAACATACCCAGTTATAAAATCTTGCATTGAAG
AAATAAAGTCCTCTTATCAAAAAGGGATCACAGACGAATTTATTAAACCATTTTTAGTTAATCCCGACGGTTTAATTAAT
GATAATGATAGTCTTATTTTTGTTAATTTTCGTTCAGACCGAATAATGCGTTTGGCTACTGCTTTTTCTAACCCTTCCAT
GACTGCTTCTTTTCAAACTCCCGGAAAAACCCCTTTTAAAGGTCAAAAATTAATTAATAATGCTTTTATTGTTAATATGA
CTTTTTATTCTCAATATGCTAAAGGTGAAATCGCTTTTCAACCAACAACCTTAAAAAACCTTTATGGTAAGGTTATCGCT
GATCATAATTTGCATCAGTTACGTATTGCAGAAACTGAAAAATATCCTCATGTTACTTTCTTTTTTGATGGTGGAAAAGA
ATTACAATTGCCAAATAGCAAACATCTTTTAATCCCATCTCCTCGTGTTGCTACTTATGATTTAAAGCCTGAAATGGGAG
CTTATGAAATCACTTCGAAAGCTAAAGAAGCTATTTTATCAAAAAAATATCAAACTATGATCCTTAACTTTGCAAATCCT
GATATGGTAGGTCACACAGGTTCTTTGGAAGCTGCTATTAAAGCGGTAGAGGTGGTTGACAGTTGTTTAAAGGGAGTTGT
TGAAGCCATCCAAAAAATAGACGGTATTGCTTGTGTGGTGGCAGACCACGGAAACGCAGAACAAATGACAGATGAGGCCG
GAAAACCTCATACAGCTCATACAACTAATCTGGTTCCTTTTGTAATTACTTCTCACAAAGTAAAATTACGACAAGAAACA
GGAGCTTTATGTGATGTTGCTCCTACTTTGTTAGAATTGCTTGGCATTCCCCAACCCCCAGAAATGACAGGAATAAGTTT
AATCGAAAAAACAAATAAAACTTCAAAATAA

Upstream 100 bases:

>100_bases
TTTTGATAAGGATTATAAATTAAAACAAATTCTTCATCACAAAGAACATTTTTAAAACTTCTTTGTGTAGATGTTTAAAG
CTTATAAGGAGGACTTTTAA

Downstream 100 bases:

>100_bases
GGATGAAAAAATGAATAAAACTTCAAAATAAGGATGAAAAAATGAATAAAACTAAAATAGTGTGCACTTTAGGACCTGCT
TGTCGCGACAAAGAAACTTT

Product: phosphoglyceromutase

Products: NA

Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MTKFAALLILDGLGLSCQKENNAFYLAKTPYLDYLLKTFPTTTLQASGEAVGLPEGQMGNSEVGHLNLGAGRVVDQYLTQ
INKSIRDQSFLQNKQFLKAIEHAKKNHSKIHLLGLVSEGGVHSHLDHFKALLELMKKHQIADKTYLHVFTDGRDDDPVSG
VKYLQQMIDDGFQIASVSGRYYALDRDNNWDRINLVYDMLTLGTYPVIKSCIEEIKSSYQKGITDEFIKPFLVNPDGLIN
DNDSLIFVNFRSDRIMRLATAFSNPSMTASFQTPGKTPFKGQKLINNAFIVNMTFYSQYAKGEIAFQPTTLKNLYGKVIA
DHNLHQLRIAETEKYPHVTFFFDGGKELQLPNSKHLLIPSPRVATYDLKPEMGAYEITSKAKEAILSKKYQTMILNFANP
DMVGHTGSLEAAIKAVEVVDSCLKGVVEAIQKIDGIACVVADHGNAEQMTDEAGKPHTAHTTNLVPFVITSHKVKLRQET
GALCDVAPTLLELLGIPQPPEMTGISLIEKTNKTSK

Sequences:

>Translated_516_residues
MTKFAALLILDGLGLSCQKENNAFYLAKTPYLDYLLKTFPTTTLQASGEAVGLPEGQMGNSEVGHLNLGAGRVVDQYLTQ
INKSIRDQSFLQNKQFLKAIEHAKKNHSKIHLLGLVSEGGVHSHLDHFKALLELMKKHQIADKTYLHVFTDGRDDDPVSG
VKYLQQMIDDGFQIASVSGRYYALDRDNNWDRINLVYDMLTLGTYPVIKSCIEEIKSSYQKGITDEFIKPFLVNPDGLIN
DNDSLIFVNFRSDRIMRLATAFSNPSMTASFQTPGKTPFKGQKLINNAFIVNMTFYSQYAKGEIAFQPTTLKNLYGKVIA
DHNLHQLRIAETEKYPHVTFFFDGGKELQLPNSKHLLIPSPRVATYDLKPEMGAYEITSKAKEAILSKKYQTMILNFANP
DMVGHTGSLEAAIKAVEVVDSCLKGVVEAIQKIDGIACVVADHGNAEQMTDEAGKPHTAHTTNLVPFVITSHKVKLRQET
GALCDVAPTLLELLGIPQPPEMTGISLIEKTNKTSK
>Mature_515_residues
TKFAALLILDGLGLSCQKENNAFYLAKTPYLDYLLKTFPTTTLQASGEAVGLPEGQMGNSEVGHLNLGAGRVVDQYLTQI
NKSIRDQSFLQNKQFLKAIEHAKKNHSKIHLLGLVSEGGVHSHLDHFKALLELMKKHQIADKTYLHVFTDGRDDDPVSGV
KYLQQMIDDGFQIASVSGRYYALDRDNNWDRINLVYDMLTLGTYPVIKSCIEEIKSSYQKGITDEFIKPFLVNPDGLIND
NDSLIFVNFRSDRIMRLATAFSNPSMTASFQTPGKTPFKGQKLINNAFIVNMTFYSQYAKGEIAFQPTTLKNLYGKVIAD
HNLHQLRIAETEKYPHVTFFFDGGKELQLPNSKHLLIPSPRVATYDLKPEMGAYEITSKAKEAILSKKYQTMILNFANPD
MVGHTGSLEAAIKAVEVVDSCLKGVVEAIQKIDGIACVVADHGNAEQMTDEAGKPHTAHTTNLVPFVITSHKVKLRQETG
ALCDVAPTLLELLGIPQPPEMTGISLIEKTNKTSK

Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]

COG id: COG0696

COG function: function code G; Phosphoglyceromutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]

Homologues:

Organism=Escherichia coli, GI1790041, Length=514, Percent_Identity=44.9416342412451, Blast_Score=434, Evalue=1e-123,
Organism=Caenorhabditis elegans, GI32564249, Length=521, Percent_Identity=40.6909788867562, Blast_Score=388, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI17507741, Length=521, Percent_Identity=40.6909788867562, Blast_Score=388, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR011258
- InterPro:   IPR006124
- InterPro:   IPR005995 [H]

Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 57295; Mature: 57164

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKFAALLILDGLGLSCQKENNAFYLAKTPYLDYLLKTFPTTTLQASGEAVGLPEGQMGN
CCCCEEEEEECCCCCEEEECCCEEEEEECCHHHHHHHHCCCCEEECCCCEECCCCCCCCC
SEVGHLNLGAGRVVDQYLTQINKSIRDQSFLQNKQFLKAIEHAKKNHSKIHLLGLVSEGG
CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
VHSHLDHFKALLELMKKHQIADKTYLHVFTDGRDDDPVSGVKYLQQMIDDGFQIASVSGR
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEECCE
YYALDRDNNWDRINLVYDMLTLGTYPVIKSCIEEIKSSYQKGITDEFIKPFLVNPDGLIN
EEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHCCCEEECCCCCCC
DNDSLIFVNFRSDRIMRLATAFSNPSMTASFQTPGKTPFKGQKLINNAFIVNMTFYSQYA
CCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCEEEEEEEEHHHHC
KGEIAFQPTTLKNLYGKVIADHNLHQLRIAETEKYPHVTFFFDGGKELQLPNSKHLLIPS
CCEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCEEECCCCCEEEECC
PRVATYDLKPEMGAYEITSKAKEAILSKKYQTMILNFANPDMVGHTGSLEAAIKAVEVVD
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHH
SCLKGVVEAIQKIDGIACVVADHGNAEQMTDEAGKPHTAHTTNLVPFVITSHKVKLRQET
HHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEEHHC
GALCDVAPTLLELLGIPQPPEMTGISLIEKTNKTSK
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCC
>Mature Secondary Structure 
TKFAALLILDGLGLSCQKENNAFYLAKTPYLDYLLKTFPTTTLQASGEAVGLPEGQMGN
CCCEEEEEECCCCCEEEECCCEEEEEECCHHHHHHHHCCCCEEECCCCEECCCCCCCCC
SEVGHLNLGAGRVVDQYLTQINKSIRDQSFLQNKQFLKAIEHAKKNHSKIHLLGLVSEGG
CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
VHSHLDHFKALLELMKKHQIADKTYLHVFTDGRDDDPVSGVKYLQQMIDDGFQIASVSGR
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEECCE
YYALDRDNNWDRINLVYDMLTLGTYPVIKSCIEEIKSSYQKGITDEFIKPFLVNPDGLIN
EEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHCCCEEECCCCCCC
DNDSLIFVNFRSDRIMRLATAFSNPSMTASFQTPGKTPFKGQKLINNAFIVNMTFYSQYA
CCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCEEEEEEEEHHHHC
KGEIAFQPTTLKNLYGKVIADHNLHQLRIAETEKYPHVTFFFDGGKELQLPNSKHLLIPS
CCEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCEEECCCCCEEEECC
PRVATYDLKPEMGAYEITSKAKEAILSKKYQTMILNFANPDMVGHTGSLEAAIKAVEVVD
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHH
SCLKGVVEAIQKIDGIACVVADHGNAEQMTDEAGKPHTAHTTNLVPFVITSHKVKLRQET
HHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEEHHC
GALCDVAPTLLELLGIPQPPEMTGISLIEKTNKTSK
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA