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The map label for this gene is degV

Identifier: 197294175

GI number: 197294175

Start: 10370

End: 11221

Strand: Direct

Name: degV

Synonym: PAa_0007

Alternate gene names: NA

Gene position: 10370-11221 (Clockwise)

Preceding gene: 197294174

Following gene: 197294179

Centisome position: 1.18

GC content: 27.46

Gene sequence:

>852_bases
GTGAAAATAAAAGTTGCTACAACCTCTACTAGCTGTCTTGATTATTATTCGCATAATTATGATATTGATATTATTAGGAT
CAAAATTTTAATTGGAGATGTTGAATATATTGATGGGGATACTATGAAATACAAACAATTTTACCAAATGTTTCAACAAA
ATCCTGATTTTCTTCCTAAAACTTCCCAAGTGTCTGTGGGCGAAATGGTAGTTTATTTTGAAAAACTCATATCTCAAGGT
TATCAAAAGGTTTTTATAACAACTTTAGCCTCTACTTTAAGTGGAACTTATAATGCCATTATTCAAGCCAAAAAAATAGT
TGCTGATAAAATTGAGGTATATTGTTACGATACCCAAACTGTTTGTTTTTGTGAAGGTTATTTTGCCCTTCAAGCTTATC
AATTATTTCAAAAAGGCCATTCGTTAGAAGAGGTTATTAAAACTTTAGATTTAATTAAAGGAAACAATACTATTTTTTTT
ATTACAGAAAAATTAACTCAATTAATTAAAAATGGTAGACTTTCTGGAGTGAGAAGTTTTTTTGGCCGTCTTTTAAGAAT
TAAACCGATTTTACAAGTGCAATCAACAGGAAAAATAGCTCTTATCCAAAAAACTCTTAACACTAATAAATCATTTTTAT
CGATTGTTAACAAAATAAAAGATTATACTCAAGGTTATAATTACCAAGCACATTTACTTTTTACTGGAGATACCAAATTA
AGAGATGATTTTAAAGTTATTTTAGAAAAAAATTTAGGTTTAAAAAATTTATTAGAAATACCTTTAACTCCTGTGATTGG
TTGTCATGTCGGTAATAATGTTATTGGTGTAGGCATTATCAGACAAAATTAA

Upstream 100 bases:

>100_bases
ATTTTTTAATTGAAAAACAGAATAGACTAGTTATACAGTTTGTCAAACATAACCCCTTTTGTGTTTAATTAGTTTTTTGC
TGAAATAAAAGGAGAATAAT

Downstream 100 bases:

>100_bases
TTTTTGCAATTTTTTTTATTTTTGTTTGTAAGAATATTTTTTTATTGACTTTTGCTATAAATTTTTGATATAATTTAAAT
TGATCCATGTTAAATTTATT

Product: DegV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKIKVATTSTSCLDYYSHNYDIDIIRIKILIGDVEYIDGDTMKYKQFYQMFQQNPDFLPKTSQVSVGEMVVYFEKLISQG
YQKVFITTLASTLSGTYNAIIQAKKIVADKIEVYCYDTQTVCFCEGYFALQAYQLFQKGHSLEEVIKTLDLIKGNNTIFF
ITEKLTQLIKNGRLSGVRSFFGRLLRIKPILQVQSTGKIALIQKTLNTNKSFLSIVNKIKDYTQGYNYQAHLLFTGDTKL
RDDFKVILEKNLGLKNLLEIPLTPVIGCHVGNNVIGVGIIRQN

Sequences:

>Translated_283_residues
MKIKVATTSTSCLDYYSHNYDIDIIRIKILIGDVEYIDGDTMKYKQFYQMFQQNPDFLPKTSQVSVGEMVVYFEKLISQG
YQKVFITTLASTLSGTYNAIIQAKKIVADKIEVYCYDTQTVCFCEGYFALQAYQLFQKGHSLEEVIKTLDLIKGNNTIFF
ITEKLTQLIKNGRLSGVRSFFGRLLRIKPILQVQSTGKIALIQKTLNTNKSFLSIVNKIKDYTQGYNYQAHLLFTGDTKL
RDDFKVILEKNLGLKNLLEIPLTPVIGCHVGNNVIGVGIIRQN
>Mature_283_residues
MKIKVATTSTSCLDYYSHNYDIDIIRIKILIGDVEYIDGDTMKYKQFYQMFQQNPDFLPKTSQVSVGEMVVYFEKLISQG
YQKVFITTLASTLSGTYNAIIQAKKIVADKIEVYCYDTQTVCFCEGYFALQAYQLFQKGHSLEEVIKTLDLIKGNNTIFF
ITEKLTQLIKNGRLSGVRSFFGRLLRIKPILQVQSTGKIALIQKTLNTNKSFLSIVNKIKDYTQGYNYQAHLLFTGDTKL
RDDFKVILEKNLGLKNLLEIPLTPVIGCHVGNNVIGVGIIRQN

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 32226; Mature: 32226

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKVATTSTSCLDYYSHNYDIDIIRIKILIGDVEYIDGDTMKYKQFYQMFQQNPDFLPK
CEEEEEECCCHHHHHHCCCCCEEEEEEEEEEECEEECCCCCHHHHHHHHHHHCCCCCCCC
TSQVSVGEMVVYFEKLISQGYQKVFITTLASTLSGTYNAIIQAKKIVADKIEVYCYDTQT
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCEEEEEEECCCE
VCFCEGYFALQAYQLFQKGHSLEEVIKTLDLIKGNNTIFFITEKLTQLIKNGRLSGVRSF
EEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCHHHHHH
FGRLLRIKPILQVQSTGKIALIQKTLNTNKSFLSIVNKIKDYTQGYNYQAHLLFTGDTKL
HHHHHHHHHHEEECCCCCEEEEEEHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC
RDDFKVILEKNLGLKNLLEIPLTPVIGCHVGNNVIGVGIIRQN
HHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCEEEEEEEECC
>Mature Secondary Structure
MKIKVATTSTSCLDYYSHNYDIDIIRIKILIGDVEYIDGDTMKYKQFYQMFQQNPDFLPK
CEEEEEECCCHHHHHHCCCCCEEEEEEEEEEECEEECCCCCHHHHHHHHHHHCCCCCCCC
TSQVSVGEMVVYFEKLISQGYQKVFITTLASTLSGTYNAIIQAKKIVADKIEVYCYDTQT
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCEEEEEEECCCE
VCFCEGYFALQAYQLFQKGHSLEEVIKTLDLIKGNNTIFFITEKLTQLIKNGRLSGVRSF
EEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCHHHHHH
FGRLLRIKPILQVQSTGKIALIQKTLNTNKSFLSIVNKIKDYTQGYNYQAHLLFTGDTKL
HHHHHHHHHHEEECCCCCEEEEEEHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC
RDDFKVILEKNLGLKNLLEIPLTPVIGCHVGNNVIGVGIIRQN
HHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]