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The map label for this gene is trbI [H]

Identifier: 153930612

GI number: 153930612

Start: 12438

End: 13817

Strand: Direct

Name: trbI [H]

Synonym: YpsIP31758_A0054

Alternate gene names: 153930612

Gene position: 12438-13817 (Clockwise)

Preceding gene: 153930617

Following gene: 153930607

Centisome position: 21.2

GC content: 43.7

Gene sequence:

>1380_bases
ATGGCAAATACCGATAATCAAATGTCTCCATCCAACTCTCCTGGTTCAATAGGAAAAACGGGTGTTCGTCGAGTGAATAA
TCTTCCACTAATTATTGTTCTCTCTGTGATAACAATATTTATCGCTATTATTGCTATGGTTGCAGTAAAAAGGTCTGACC
AACAAAATCAAGCCCCTGAAACCCCAAAATCAGAAAAAACAGTTAGCAGCTCTTCAATGGCCGCAGATATTGTCGCTGGC
CATAATAACGGTATTATCCCACCAGAACAGATTACCGCCCCAACTCAAGCATCAGAACCAACTGAGCCAACAGAACCAAC
AACAGCGATTCCAGTTGCAAAAGTTGATAACCCAAATGAACCACCAGTACCTCCTCGTAATAACGGGAGCCGCCAAGATA
TACCTAACGATCCCGATTTAGACCGTATAAAAATGGCAAAGCTGCAACAATTTGAAGAAGCAGTTAAAGCTAAGACAACT
GTTTCTATTCCAACACTTCGCGATAATGCAACCGGCGCAGATGGGGCAACACCGACAAGAGATCAAACCTTGGCGCGCTT
AGAAGCTGTTCGGCGTCAAATTGATCAAACACAAAATGAAGACCCAACTTCGGCCTACAAAAAACGCTTACAGCAATTGC
AAGGTAATGGCGGGATGAGCGGAGATAACGCGAGTTCTGGCGGTGATGGCCTTGCTACATCCAGTAGCAACGATATTGAA
CAATTTGCCGGTACTGGCGTAACAGACCGTTGGGCATTGAATACAAAAGTTGAAGCTCCTCGTTCACCATTTGAAATTAG
AGCTGGTGCGGTTGTTCCTGGCGTAATGATCAGTGGCGTTAATTCTGATTTGCCTGGTCAAATAATGGGCCAAGTGACAC
AAGATGTATTTGATACTCCAACGGGCAAACATCTATTAATTCCTCAAGGAACTCGGCTGACTGGCTCATACACAAGTGAT
GTCGCTTTTGGTCAGTCAGCAGTAATGATTGCTTGGCAACGTATGATTTTCCCTGATGGAAAGGCGCTAGATATTGCAGC
AATGCCCGGAGCTGATAGTGCCGGTTATTCCGGCTTCCGAGATCAAGTTAATAATCATTTATTCCGGATATTTTCCTCAG
CATTCCTACTCTCTGGCGTTACTGCGGGGGTGACGTATAGCCAAGGGAGAAATGAGAACAGCAATGGGAATAATAGCCCT
ACCGCAAGCAGCGCATTAAGTGAAGCGTTAGGTCAACAGTTTGGCCAAGTCACCGCCCAAATGATTGCCAAGAATTTAAA
CATTGCACCAACTTTAGAAATTCGTCCTGGTTATCGCTTCAATATTATTGTCATTAAAGATATGACATTTAAAAAGCCTT
ATAAGCCATTTGATTACTAA

Upstream 100 bases:

>100_bases
GTCACGATAAATGTGGGTAAACAGACATTAAGTAGGGCTTACGTCTCACAGAACGGCAGTATCTATCCGTCAGTATCTTG
GGCGAGGAAGGAATAAGACT

Downstream 100 bases:

>100_bases
CCTTTGAGGGATGTGTTATGACTTTTTTAAACAACCGTTCTTTAGCCGCTAAAATTATGTTCTTGGTCGCGCTATCAGGT
TCGCCAGTAACACAAACATC

Product: conjugal transfer protein TrbI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MANTDNQMSPSNSPGSIGKTGVRRVNNLPLIIVLSVITIFIAIIAMVAVKRSDQQNQAPETPKSEKTVSSSSMAADIVAG
HNNGIIPPEQITAPTQASEPTEPTEPTTAIPVAKVDNPNEPPVPPRNNGSRQDIPNDPDLDRIKMAKLQQFEEAVKAKTT
VSIPTLRDNATGADGATPTRDQTLARLEAVRRQIDQTQNEDPTSAYKKRLQQLQGNGGMSGDNASSGGDGLATSSSNDIE
QFAGTGVTDRWALNTKVEAPRSPFEIRAGAVVPGVMISGVNSDLPGQIMGQVTQDVFDTPTGKHLLIPQGTRLTGSYTSD
VAFGQSAVMIAWQRMIFPDGKALDIAAMPGADSAGYSGFRDQVNNHLFRIFSSAFLLSGVTAGVTYSQGRNENSNGNNSP
TASSALSEALGQQFGQVTAQMIAKNLNIAPTLEIRPGYRFNIIVIKDMTFKKPYKPFDY

Sequences:

>Translated_459_residues
MANTDNQMSPSNSPGSIGKTGVRRVNNLPLIIVLSVITIFIAIIAMVAVKRSDQQNQAPETPKSEKTVSSSSMAADIVAG
HNNGIIPPEQITAPTQASEPTEPTEPTTAIPVAKVDNPNEPPVPPRNNGSRQDIPNDPDLDRIKMAKLQQFEEAVKAKTT
VSIPTLRDNATGADGATPTRDQTLARLEAVRRQIDQTQNEDPTSAYKKRLQQLQGNGGMSGDNASSGGDGLATSSSNDIE
QFAGTGVTDRWALNTKVEAPRSPFEIRAGAVVPGVMISGVNSDLPGQIMGQVTQDVFDTPTGKHLLIPQGTRLTGSYTSD
VAFGQSAVMIAWQRMIFPDGKALDIAAMPGADSAGYSGFRDQVNNHLFRIFSSAFLLSGVTAGVTYSQGRNENSNGNNSP
TASSALSEALGQQFGQVTAQMIAKNLNIAPTLEIRPGYRFNIIVIKDMTFKKPYKPFDY
>Mature_458_residues
ANTDNQMSPSNSPGSIGKTGVRRVNNLPLIIVLSVITIFIAIIAMVAVKRSDQQNQAPETPKSEKTVSSSSMAADIVAGH
NNGIIPPEQITAPTQASEPTEPTEPTTAIPVAKVDNPNEPPVPPRNNGSRQDIPNDPDLDRIKMAKLQQFEEAVKAKTTV
SIPTLRDNATGADGATPTRDQTLARLEAVRRQIDQTQNEDPTSAYKKRLQQLQGNGGMSGDNASSGGDGLATSSSNDIEQ
FAGTGVTDRWALNTKVEAPRSPFEIRAGAVVPGVMISGVNSDLPGQIMGQVTQDVFDTPTGKHLLIPQGTRLTGSYTSDV
AFGQSAVMIAWQRMIFPDGKALDIAAMPGADSAGYSGFRDQVNNHLFRIFSSAFLLSGVTAGVTYSQGRNENSNGNNSPT
ASSALSEALGQQFGQVTAQMIAKNLNIAPTLEIRPGYRFNIIVIKDMTFKKPYKPFDY

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 48968; Mature: 48837

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANTDNQMSPSNSPGSIGKTGVRRVNNLPLIIVLSVITIFIAIIAMVAVKRSDQQNQAPE
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TPKSEKTVSSSSMAADIVAGHNNGIIPPEQITAPTQASEPTEPTEPTTAIPVAKVDNPNE
CCCHHHHHCHHHHHHHEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
PPVPPRNNGSRQDIPNDPDLDRIKMAKLQQFEEAVKAKTTVSIPTLRDNATGADGATPTR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCH
DQTLARLEAVRRQIDQTQNEDPTSAYKKRLQQLQGNGGMSGDNASSGGDGLATSSSNDIE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH
QFAGTGVTDRWALNTKVEAPRSPFEIRAGAVVPGVMISGVNSDLPGQIMGQVTQDVFDTP
HHHCCCCCCCEEECCCCCCCCCCCEEECCCCCCCHHEECCCCCCCHHHHHHHHHHHHCCC
TGKHLLIPQGTRLTGSYTSDVAFGQSAVMIAWQRMIFPDGKALDIAAMPGADSAGYSGFR
CCCEEECCCCCEECCCCCCHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHH
DQVNNHLFRIFSSAFLLSGVTAGVTYSQGRNENSNGNNSPTASSALSEALGQQFGQVTAQ
HHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
MIAKNLNIAPTLEIRPGYRFNIIVIKDMTFKKPYKPFDY
HHHHCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
ANTDNQMSPSNSPGSIGKTGVRRVNNLPLIIVLSVITIFIAIIAMVAVKRSDQQNQAPE
CCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TPKSEKTVSSSSMAADIVAGHNNGIIPPEQITAPTQASEPTEPTEPTTAIPVAKVDNPNE
CCCHHHHHCHHHHHHHEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
PPVPPRNNGSRQDIPNDPDLDRIKMAKLQQFEEAVKAKTTVSIPTLRDNATGADGATPTR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCH
DQTLARLEAVRRQIDQTQNEDPTSAYKKRLQQLQGNGGMSGDNASSGGDGLATSSSNDIE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH
QFAGTGVTDRWALNTKVEAPRSPFEIRAGAVVPGVMISGVNSDLPGQIMGQVTQDVFDTP
HHHCCCCCCCEEECCCCCCCCCCCEEECCCCCCCHHEECCCCCCCHHHHHHHHHHHHCCC
TGKHLLIPQGTRLTGSYTSDVAFGQSAVMIAWQRMIFPDGKALDIAAMPGADSAGYSGFR
CCCEEECCCCCEECCCCCCHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHH
DQVNNHLFRIFSSAFLLSGVTAGVTYSQGRNENSNGNNSPTASSALSEALGQQFGQVTAQ
HHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
MIAKNLNIAPTLEIRPGYRFNIIVIKDMTFKKPYKPFDY
HHHHCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]