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The map label for this gene is secB2

Identifier: 134302774

GI number: 134302774

Start: 1863302

End: 1863751

Strand: Direct

Name: secB2

Synonym: FTW_1987

Alternate gene names: 134302774

Gene position: 1863302-1863751 (Clockwise)

Preceding gene: 134302773

Following gene: 134302775

Centisome position: 98.15

GC content: 35.78

Gene sequence:

>450_bases
ATGGATCAGCAAGCACAACCTCAATTTCAAATCCAAAAAGTATATGTAAAAGATCTTTCTTTCTCTATTCCAAATTCTGA
TAAGATATGGACTACAAATTGGAAGCCAGAACTGCACACAGACCTAAAAGTTGAGGCTACTAAACTTCCAGAAGAGAACA
CCTATGAAACTGTTTTAACTCTTGAAGTTAAAGTTGAAAATGATGGCATGGTTGCTTTTGAGGCAGAAGTTAAACAGGCT
GGCATTTTTACAGTTGCTAACATGCAAGAAGCTCAGATTGAGCATGCTAAAAAAGCATTTTGTCCAAATATTCTTTACCA
TTATGCACGTGAGGCAATTTCTGATTTAGTGATTAGTGGTGGATTTCCACAACTATGTTTATCTGCAGTAAATTTTGACG
CGATGTATCAAGATTCATTAAAAGAGTCAGCAGATAGCAAGCAACACTAA

Upstream 100 bases:

>100_bases
AGGTTTTTGTACTTAAAGGTGGCTTAGCAGCATGGCTACAGGCTAGTTACCCAGTTAAATCATTGTCAAAGTAAAATTTA
AAAATATTAAGGATCATAGT

Downstream 100 bases:

>100_bases
GAAAACTAATAGGAGTCAGTTATGAGTAAAGAAAAGGCGCTAGAATCAGCCTTATCACAGATTGAAAAGCAATTTGGTAA
AGGCGCTATCATGAGATTAG

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MDQQAQPQFQIQKVYVKDLSFSIPNSDKIWTTNWKPELHTDLKVEATKLPEENTYETVLTLEVKVENDGMVAFEAEVKQA
GIFTVANMQEAQIEHAKKAFCPNILYHYAREAISDLVISGGFPQLCLSAVNFDAMYQDSLKESADSKQH

Sequences:

>Translated_149_residues
MDQQAQPQFQIQKVYVKDLSFSIPNSDKIWTTNWKPELHTDLKVEATKLPEENTYETVLTLEVKVENDGMVAFEAEVKQA
GIFTVANMQEAQIEHAKKAFCPNILYHYAREAISDLVISGGFPQLCLSAVNFDAMYQDSLKESADSKQH
>Mature_149_residues
MDQQAQPQFQIQKVYVKDLSFSIPNSDKIWTTNWKPELHTDLKVEATKLPEENTYETVLTLEVKVENDGMVAFEAEVKQA
GIFTVANMQEAQIEHAKKAFCPNILYHYAREAISDLVISGGFPQLCLSAVNFDAMYQDSLKESADSKQH

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family

Homologues:

Organism=Escherichia coli, GI1790038, Length=136, Percent_Identity=42.6470588235294, Blast_Score=127, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECB1_FRATF (A7N938)

Other databases:

- EMBL:   CP000803
- RefSeq:   YP_001427447.1
- ProteinModelPortal:   A7N938
- SMR:   A7N938
- STRING:   A7N938
- GeneID:   5524384
- GenomeReviews:   CP000803_GR
- KEGG:   fta:FTA_0013
- eggNOG:   COG1952
- HOGENOM:   HBG294212
- OMA:   GFPPLMI
- ProtClustDB:   PRK13031
- BioCyc:   FTUL458234:FTA_0013-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00821
- InterPro:   IPR003708
- Gene3D:   G3DSA:3.10.420.10
- PRINTS:   PR01594
- TIGRFAMs:   TIGR00809

Pfam domain/function: PF02556 SecB; SSF54611 SecB

EC number: NA

Molecular weight: Translated: 16900; Mature: 16900

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQQAQPQFQIQKVYVKDLSFSIPNSDKIWTTNWKPELHTDLKVEATKLPEENTYETVLT
CCCCCCCCHHHHHHHEEHHEECCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCEEEEEE
LEVKVENDGMVAFEAEVKQAGIFTVANMQEAQIEHAKKAFCPNILYHYAREAISDLVISG
EEEEECCCCEEEEECCCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
GFPQLCLSAVNFDAMYQDSLKESADSKQH
CCHHHHHHHHCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDQQAQPQFQIQKVYVKDLSFSIPNSDKIWTTNWKPELHTDLKVEATKLPEENTYETVLT
CCCCCCCCHHHHHHHEEHHEECCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCEEEEEE
LEVKVENDGMVAFEAEVKQAGIFTVANMQEAQIEHAKKAFCPNILYHYAREAISDLVISG
EEEEECCCCEEEEECCCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
GFPQLCLSAVNFDAMYQDSLKESADSKQH
CCHHHHHHHHCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA