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The map label for this gene is ybgL [C]

Identifier: 134302655

GI number: 134302655

Start: 1727347

End: 1728123

Strand: Reverse

Name: ybgL [C]

Synonym: FTW_1840

Alternate gene names: 134302655

Gene position: 1728123-1727347 (Counterclockwise)

Preceding gene: 134302656

Following gene: 134302654

Centisome position: 91.03

GC content: 34.75

Gene sequence:

>777_bases
ATGCTTTTAATAAATTGTGATTTAGGAGAGCGGGGTGTTGCTCATCCTATTGATGATAGGCTTGTTGACTACATTGACAT
AGCAAATATAGCTTGTGGAGGTCATGCGGGAGATAAGGCAAGTGTTGATTACTATGTAAATCTTTGTAAAGGGAAAAATG
TCAAAATTACGGCGCATATATCTTATCCAGATAAGCAAAATTTTGGTAGAAAAGTGATTGATATTGATCATAATGTTTTA
TGTGAGTCTTTTGATCAACAATTTGCATTATTTGATAGTGAGATTAAAGCCATAAAGCCACACGGAGTTTTATATAATCA
GTTAAATGTCGATCAAGAACTAGCAAAAACTTTCATACAATGGTGTATTAAAAATAATATAGATGAGCTGCTTGTTAGCC
CCTTTGGAGTGGTTGCTGAATATGCTAAAGATAAGGGCATAAAGACTATCAAAGAGAGCTTTGCTGAAAGAGGTTATATG
CTCGATAATCATAATAATCCTATGCTAATACCGAGAGGTCAGCCAAATGCTGAGATTGAAGATGTGGCATTGGCTGTAGC
GCAGTATAATCAGCTCAAACAAGGGTTTGTTAAAATTGCTGGTGAGGAGATTGCTTTTAAATCTCAAACTATATGTATAC
ATTCAGATAGTAGTATAGCCTTAGAGTTAGCACAAGAGTTGTATAAAAATAAAGGTCAAGCTTATGCTAGATATTTTGTC
AATAAAAGGTGGTTTAGTCTTTGCTGTTGCGCTACGTCAATATGGCTTACAAGATAA

Upstream 100 bases:

>100_bases
CAGAGCAGTCACCTAGTGGTTGGAATATTATTGGGGTCTCTGATTTCAAAGATTTTGCTAAATTTAGTGCAGGCGACAAA
ATAATTTTTAGGGAGAAATA

Downstream 100 bases:

>100_bases
GGGGATATCACCTCAAGGAGCGCAAGATCAGCTTAGTTTTATTACAGCGTATAATCTTGTTGGTAAACCTACTAATTTCC
AAGCTGTAGAAATGATCTAT

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MLLINCDLGERGVAHPIDDRLVDYIDIANIACGGHAGDKASVDYYVNLCKGKNVKITAHISYPDKQNFGRKVIDIDHNVL
CESFDQQFALFDSEIKAIKPHGVLYNQLNVDQELAKTFIQWCIKNNIDELLVSPFGVVAEYAKDKGIKTIKESFAERGYM
LDNHNNPMLIPRGQPNAEIEDVALAVAQYNQLKQGFVKIAGEEIAFKSQTICIHSDSSIALELAQELYKNKGQAYARYFV
NKRWFSLCCCATSIWLTR

Sequences:

>Translated_258_residues
MLLINCDLGERGVAHPIDDRLVDYIDIANIACGGHAGDKASVDYYVNLCKGKNVKITAHISYPDKQNFGRKVIDIDHNVL
CESFDQQFALFDSEIKAIKPHGVLYNQLNVDQELAKTFIQWCIKNNIDELLVSPFGVVAEYAKDKGIKTIKESFAERGYM
LDNHNNPMLIPRGQPNAEIEDVALAVAQYNQLKQGFVKIAGEEIAFKSQTICIHSDSSIALELAQELYKNKGQAYARYFV
NKRWFSLCCCATSIWLTR
>Mature_258_residues
MLLINCDLGERGVAHPIDDRLVDYIDIANIACGGHAGDKASVDYYVNLCKGKNVKITAHISYPDKQNFGRKVIDIDHNVL
CESFDQQFALFDSEIKAIKPHGVLYNQLNVDQELAKTFIQWCIKNNIDELLVSPFGVVAEYAKDKGIKTIKESFAERGYM
LDNHNNPMLIPRGQPNAEIEDVALAVAQYNQLKQGFVKIAGEEIAFKSQTICIHSDSSIALELAQELYKNKGQAYARYFV
NKRWFSLCCCATSIWLTR

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=234, Percent_Identity=35.8974358974359, Blast_Score=114, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 29071; Mature: 29071

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLINCDLGERGVAHPIDDRLVDYIDIANIACGGHAGDKASVDYYVNLCKGKNVKITAHI
CEEEECCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCEEEEEEE
SYPDKQNFGRKVIDIDHNVLCESFDQQFALFDSEIKAIKPHGVLYNQLNVDQELAKTFIQ
CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHEECCCCEEEHHCCCCHHHHHHHHH
WCIKNNIDELLVSPFGVVAEYAKDKGIKTIKESFAERGYMLDNHNNPMLIPRGQPNAEIE
HHHHCCHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCEEEECCCCCCCHH
DVALAVAQYNQLKQGFVKIAGEEIAFKSQTICIHSDSSIALELAQELYKNKGQAYARYFV
HHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHH
NKRWFSLCCCATSIWLTR
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLLINCDLGERGVAHPIDDRLVDYIDIANIACGGHAGDKASVDYYVNLCKGKNVKITAHI
CEEEECCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCEEEEEEE
SYPDKQNFGRKVIDIDHNVLCESFDQQFALFDSEIKAIKPHGVLYNQLNVDQELAKTFIQ
CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHEECCCCEEEHHCCCCHHHHHHHHH
WCIKNNIDELLVSPFGVVAEYAKDKGIKTIKESFAERGYMLDNHNNPMLIPRGQPNAEIE
HHHHCCHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCEEEECCCCCCCHH
DVALAVAQYNQLKQGFVKIAGEEIAFKSQTICIHSDSSIALELAQELYKNKGQAYARYFV
HHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHH
NKRWFSLCCCATSIWLTR
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA