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The map label for this gene is tsf [H]

Identifier: 134302596

GI number: 134302596

Start: 1661770

End: 1662639

Strand: Reverse

Name: tsf [H]

Synonym: FTW_1768

Alternate gene names: 134302596

Gene position: 1662639-1661770 (Counterclockwise)

Preceding gene: 134302597

Following gene: 134302595

Centisome position: 87.58

GC content: 38.74

Gene sequence:

>870_bases
ATGTCAAATATTTCTGCTAAATTAGTAAAAGAACTTAGAGAAAGAACTGGTGCAGGTATGATGGAGTGCAAAAAAGCTCT
AGTTGCCGCTGCTGGTGATATTGAAAAAGCTGCTGAAGAAATGAGAATTTCTGGTCAAGCAAAGGCTGATAAGAAAGCTT
CACGTGTTGCTGCTGAAGGTGTCATTGAAGTTTATGCTGCTGACGGTAGAGCTATTTTGCTTGAGATTAATTCAGAGACT
GATTTCGTTGCTAGAGATGAGACTTTCAAGAAGTTTGCTCAAGAAGCTGTAAAAGCTGCTCATGCTGCTAATGCTAAGAC
TATCGAAGAAGTTTTGGCTGCTAAAACTTCAAATGGTGAAACTGTTGAAGAAGTTAGAAAATCACTAATTGCTAAAATTG
GTGAAAACATTCAAGTGCGTAGAGTTAAGACTGTTGAGGCTGAGACTTTAGGTGCTTATATCCATGGTAGTAAGATTGGT
GTGGTTGCTGCACTAGAGGGTGGTGATGAAGATCTTGCTAAAGATGTTGCTATGCATGTTGCTGCTGCAAACCCTATGGT
TGTTTCAGGTGATCAGGTGCCAGCGGATGTTGTAGCTAAAGAAAAAGAAATCTTCACAGCTCAAGCAAAAGAAAGTGGTA
AGCCAGCTGAAATCATCGAGAAAATGATTGTTGGTAGAATTCGTAAGTTCCTAGATGAAGTTGCTCTTTTAGGCCAAGAT
TTTGTTAAAGATCCTGCTATAAAAGTTGAGAAGCTAGTTAAAGATAAAGGAGCTAAAGTAGTTAATTTCATCAGATTAGA
TGTTGGTGAAGGTATCGAGAAGAAAGAAGAAGACTTCGCAGCAGAGGTGATGAGTCAAATTAAAGGTTAA

Upstream 100 bases:

>100_bases
ATTTGCCGATGCTGTTATTGATGCTCAAGGTCTAGATAGAGCAGTTGAAGCAAAAGCTGATGAAGCCGCTCAAGCATAAG
AAACAAACAAGGATAAAACA

Downstream 100 bases:

>100_bases
TATATGTCTAATGATTCGTCAGAATGTTCTCAAAAACTCCCTAAACTTAAGAGAATTCTTCTTAAGTTAAGTGGAGAATC
TTTATCTGCAGATCAGGGTT

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSNISAKLVKELRERTGAGMMECKKALVAAAGDIEKAAEEMRISGQAKADKKASRVAAEGVIEVYAADGRAILLEINSET
DFVARDETFKKFAQEAVKAAHAANAKTIEEVLAAKTSNGETVEEVRKSLIAKIGENIQVRRVKTVEAETLGAYIHGSKIG
VVAALEGGDEDLAKDVAMHVAAANPMVVSGDQVPADVVAKEKEIFTAQAKESGKPAEIIEKMIVGRIRKFLDEVALLGQD
FVKDPAIKVEKLVKDKGAKVVNFIRLDVGEGIEKKEEDFAAEVMSQIKG

Sequences:

>Translated_289_residues
MSNISAKLVKELRERTGAGMMECKKALVAAAGDIEKAAEEMRISGQAKADKKASRVAAEGVIEVYAADGRAILLEINSET
DFVARDETFKKFAQEAVKAAHAANAKTIEEVLAAKTSNGETVEEVRKSLIAKIGENIQVRRVKTVEAETLGAYIHGSKIG
VVAALEGGDEDLAKDVAMHVAAANPMVVSGDQVPADVVAKEKEIFTAQAKESGKPAEIIEKMIVGRIRKFLDEVALLGQD
FVKDPAIKVEKLVKDKGAKVVNFIRLDVGEGIEKKEEDFAAEVMSQIKG
>Mature_288_residues
SNISAKLVKELRERTGAGMMECKKALVAAAGDIEKAAEEMRISGQAKADKKASRVAAEGVIEVYAADGRAILLEINSETD
FVARDETFKKFAQEAVKAAHAANAKTIEEVLAAKTSNGETVEEVRKSLIAKIGENIQVRRVKTVEAETLGAYIHGSKIGV
VAALEGGDEDLAKDVAMHVAAANPMVVSGDQVPADVVAKEKEIFTAQAKESGKPAEIIEKMIVGRIRKFLDEVALLGQDF
VKDPAIKVEKLVKDKGAKVVNFIRLDVGEGIEKKEEDFAAEVMSQIKG

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Homo sapiens, GI171846268, Length=302, Percent_Identity=25.1655629139073, Blast_Score=85, Evalue=9e-17,
Organism=Escherichia coli, GI1786366, Length=288, Percent_Identity=52.4305555555556, Blast_Score=268, Evalue=4e-73,
Organism=Caenorhabditis elegans, GI17561440, Length=301, Percent_Identity=25.5813953488372, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI19921466, Length=299, Percent_Identity=26.0869565217391, Blast_Score=79, Evalue=5e-15,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 30988; Mature: 30857

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS01126 EF_TS_1 ; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNISAKLVKELRERTGAGMMECKKALVAAAGDIEKAAEEMRISGQAKADKKASRVAAEG
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
VIEVYAADGRAILLEINSETDFVARDETFKKFAQEAVKAAHAANAKTIEEVLAAKTSNGE
HHEEEECCCCEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCH
TVEEVRKSLIAKIGENIQVRRVKTVEAETLGAYIHGSKIGVVAALEGGDEDLAKDVAMHV
HHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHHHHH
AAANPMVVSGDQVPADVVAKEKEIFTAQAKESGKPAEIIEKMIVGRIRKFLDEVALLGQD
HCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FVKDPAIKVEKLVKDKGAKVVNFIRLDVGEGIEKKEEDFAAEVMSQIKG
HHCCHHHHHHHHHHHCCCHHHHHHEECCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNISAKLVKELRERTGAGMMECKKALVAAAGDIEKAAEEMRISGQAKADKKASRVAAEG
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
VIEVYAADGRAILLEINSETDFVARDETFKKFAQEAVKAAHAANAKTIEEVLAAKTSNGE
HHEEEECCCCEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCH
TVEEVRKSLIAKIGENIQVRRVKTVEAETLGAYIHGSKIGVVAALEGGDEDLAKDVAMHV
HHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHHHHH
AAANPMVVSGDQVPADVVAKEKEIFTAQAKESGKPAEIIEKMIVGRIRKFLDEVALLGQD
HCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FVKDPAIKVEKLVKDKGAKVVNFIRLDVGEGIEKKEEDFAAEVMSQIKG
HHCCHHHHHHHHHHHCCCHHHHHHEECCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA