| Definition | Francisella tularensis subsp. tularensis WY96-3418, complete genome. |
|---|---|
| Accession | NC_009257 |
| Length | 1,898,476 |
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The map label for this gene is 134302485
Identifier: 134302485
GI number: 134302485
Start: 1542739
End: 1543599
Strand: Reverse
Name: 134302485
Synonym: FTW_1638
Alternate gene names: NA
Gene position: 1543599-1542739 (Counterclockwise)
Preceding gene: 134302486
Following gene: 134302482
Centisome position: 81.31
GC content: 34.73
Gene sequence:
>861_bases ATGGCGAATATAAAAGTTGCAGTTGTCCAATTATCTTTTAATGATAATGAAGCTGAAAATTTAGCAAAACTGGAGAGTAA AATTATTCAAGCAGCTAAAAATGGTGCAAAAATAATTCTTACTCCAGAGTTACCAAGTTATCTATATTTTTGCAAAAAAC AAAATTCTAAATATTTTGATTTAGCTAAAACCATTGATGAATCACCAATAGTAAAATTATATAAACTCTTAGCACATAAA TATAATATTGTTTTGCCTGCTAGTTTTTTTGAGAGAGATGGAAATGCTTGTTATAACTCGATAGCAATGATTGATGCGGA TGGTTCGATAATGGGTGTATATCGTAAAGCCCATATTCCAGACGGTATTGGTTACCAAGAGAAATATTATTTCTCACCTG GAAGTGCTGGTTTTAAGGTTTGGGATACTAAATATGCTAAAGTTGGAGTTGGTATTTGCTGGGATCAATGGTTTCCAGAA GCTGCTAGAGTAATGGCTTTAAAAGGTGCTGAAATTTTATTATATCCAACAGCAATAGGAAGCGAACCACACTTACCAGA TTACGATTCAAAAGATCATTGGCAAAGAGTGATGCAAGGGCATGCTGCGGCAAATATGTTGCCCGTATTAGCATCAAATA GATATGCAACTGAGGCAAATGATGATATCACAGCAACTTATTATGGCAGCTCATTCATAACTGATCATACTGGTGATAAA ATTGCTGAGGCTGACAGAAGCGGTGACGATATACTTTATGCAACATTTGATTTTGCTGAACTACAGCAGCAAAGGTTTTA TTGGGGATTATTTAGGGATCGTCGCCCTGAGCTTTATGATGAAATTGTTAGAAAGTATTAA
Upstream 100 bases:
>100_bases GATCGTAGTATTGAACAGCTTAATATTATTGACCTTGTAATTGGTGGAGGAGGAATTCACTGTATTACTATGCAACAACC GGCTATAAAGGAGATTTGAT
Downstream 100 bases:
>100_bases ATTGATAAAAATGTTTTTAGTTTAGAGTTCTAACCTGCATAATCTCACCATTTTTTGAGATTTTTATATAGTTACCATCT TTGAACCAGTCGCCAAGTAC
Product: carbon-nitrogen hydrolase family protein
Products: NA
Alternate protein names: D-N-alpha-carbamilase [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MANIKVAVVQLSFNDNEAENLAKLESKIIQAAKNGAKIILTPELPSYLYFCKKQNSKYFDLAKTIDESPIVKLYKLLAHK YNIVLPASFFERDGNACYNSIAMIDADGSIMGVYRKAHIPDGIGYQEKYYFSPGSAGFKVWDTKYAKVGVGICWDQWFPE AARVMALKGAEILLYPTAIGSEPHLPDYDSKDHWQRVMQGHAAANMLPVLASNRYATEANDDITATYYGSSFITDHTGDK IAEADRSGDDILYATFDFAELQQQRFYWGLFRDRRPELYDEIVRKY
Sequences:
>Translated_286_residues MANIKVAVVQLSFNDNEAENLAKLESKIIQAAKNGAKIILTPELPSYLYFCKKQNSKYFDLAKTIDESPIVKLYKLLAHK YNIVLPASFFERDGNACYNSIAMIDADGSIMGVYRKAHIPDGIGYQEKYYFSPGSAGFKVWDTKYAKVGVGICWDQWFPE AARVMALKGAEILLYPTAIGSEPHLPDYDSKDHWQRVMQGHAAANMLPVLASNRYATEANDDITATYYGSSFITDHTGDK IAEADRSGDDILYATFDFAELQQQRFYWGLFRDRRPELYDEIVRKY >Mature_285_residues ANIKVAVVQLSFNDNEAENLAKLESKIIQAAKNGAKIILTPELPSYLYFCKKQNSKYFDLAKTIDESPIVKLYKLLAHKY NIVLPASFFERDGNACYNSIAMIDADGSIMGVYRKAHIPDGIGYQEKYYFSPGSAGFKVWDTKYAKVGVGICWDQWFPEA ARVMALKGAEILLYPTAIGSEPHLPDYDSKDHWQRVMQGHAAANMLPVLASNRYATEANDDITATYYGSSFITDHTGDKI AEADRSGDDILYATFDFAELQQQRFYWGLFRDRRPELYDEIVRKY
Specific function: The enzyme catalyzes the hydrolysis of N-carbamoyl-D- amino acids to the corresponding which are useful intermediates in the preparation of beta-lactam antibiotics. Industrial production of beta-lactam antibiotics is now being developed using this enzyme
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=293, Percent_Identity=30.0341296928328, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI7706509, Length=302, Percent_Identity=26.8211920529801, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI5031947, Length=288, Percent_Identity=25.6944444444444, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI297632350, Length=288, Percent_Identity=25.6944444444444, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI297632348, Length=288, Percent_Identity=25.6944444444444, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI297632346, Length=203, Percent_Identity=26.6009852216749, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17533173, Length=304, Percent_Identity=26.3157894736842, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17556280, Length=283, Percent_Identity=25.0883392226148, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6323383, Length=292, Percent_Identity=30.1369863013699, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6322335, Length=316, Percent_Identity=25.9493670886076, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI21358471, Length=282, Percent_Identity=29.0780141843972, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI21355835, Length=287, Percent_Identity=26.8292682926829, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI17933642, Length=279, Percent_Identity=23.2974910394265, Blast_Score=76, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.1.77 [H]
Molecular weight: Translated: 32430; Mature: 32299
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANIKVAVVQLSFNDNEAENLAKLESKIIQAAKNGAKIILTPELPSYLYFCKKQNSKYFD CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCEEH LAKTIDESPIVKLYKLLAHKYNIVLPASFFERDGNACYNSIAMIDADGSIMGVYRKAHIP HHHHCCCCHHHHHHHHHHHHCCEEEEHHHHHCCCCHHHCEEEEEECCCCEEEEEEECCCC DGIGYQEKYYFSPGSAGFKVWDTKYAKVGVGICWDQWFPEAARVMALKGAEILLYPTAIG CCCCCCCEEEECCCCCCEEEECCEEEEEECEEEHHHCCHHHHHEEEECCCEEEEEEECCC SEPHLPDYDSKDHWQRVMQGHAAANMLPVLASNRYATEANDDITATYYGSSFITDHTGDK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCCCH IAEADRSGDDILYATFDFAELQQQRFYWGLFRDRRPELYDEIVRKY HHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure ANIKVAVVQLSFNDNEAENLAKLESKIIQAAKNGAKIILTPELPSYLYFCKKQNSKYFD CCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCEEH LAKTIDESPIVKLYKLLAHKYNIVLPASFFERDGNACYNSIAMIDADGSIMGVYRKAHIP HHHHCCCCHHHHHHHHHHHHCCEEEEHHHHHCCCCHHHCEEEEEECCCCEEEEEEECCCC DGIGYQEKYYFSPGSAGFKVWDTKYAKVGVGICWDQWFPEAARVMALKGAEILLYPTAIG CCCCCCCEEEECCCCCCEEEECCEEEEEECEEEHHHCCHHHHHEEEECCCEEEEEEECCC SEPHLPDYDSKDHWQRVMQGHAAANMLPVLASNRYATEANDDITATYYGSSFITDHTGDK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCCCH IAEADRSGDDILYATFDFAELQQQRFYWGLFRDRRPELYDEIVRKY HHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9648217; 10903946 [H]