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The map label for this gene is lptF [H]

Identifier: 134302361

GI number: 134302361

Start: 1389111

End: 1390193

Strand: Direct

Name: lptF [H]

Synonym: FTW_1485

Alternate gene names: 134302361

Gene position: 1389111-1390193 (Clockwise)

Preceding gene: 134302353

Following gene: 134302362

Centisome position: 73.17

GC content: 29.36

Gene sequence:

>1083_bases
TTGATTCTTGAAAAATATTACAATAAAGATATAGTTAATACCTTTACATCTATCACATTATTTATAATATCTATAGTATC
AGCTAATCTACTAATTAGACTCTTCCAAGAAGCCTATTCACAGGGTTTAGGAATCGATTCAATTGTTAAATTTGTTATAT
TAACAATACCAGAAAATGTAAGCTTAGTTGCTCCTATTGCAATATTTCTGGCAATAGTCATTTGTTTTGGTAAATACTTC
GCTAATAATGAAATGTTTGTAACTATAGCTGGTGGTATCACTTGGATGCAAATAGTCAAAAATACTTTAAAGCCTGTAGT
TGCATTGACTATAATAACGCTTATAACAGTGATGTATTTAAACCCTCTTTCAAAACAAACTTTAGATATTTACAGAGCTT
CTTTATCTGCCAAAGCTCTTCTATCATCAATAACTGATCAAAAAATAATCAAAGCCCCTGATGGTAAAATTATTTATATT
GGTAATAAGTCAGGAAATACTTTGTCAGACGTTTTTTTATATCAAAATACTCCACAAGATGGCGAGTATAAAGTTATGAC
TGCACCAACTGCAAAAATTGTCTCTGATAAAACCGCTGCTTATATAGATTTTATGAATGTGAATATTTATACAAAAAATT
CCCAAAACTCTGAGTATAGCTATGATAATGCTAAAAAAGCTATATATACGATATTTGATAATTCTGACCGTGATTATAAT
CATGATAGAGTAGATAGACTATATATGCATACTCTAATAGAAAACTTTAATGATAAAAATAATGGTACTGCATATAAAGC
AGAATTTTTGGGACGCATTAATAACGCAATATCAGTGATAGTATCTTCACTTTTAGCTCTTGCTCTTTGTCGCCTACGAC
CAAGGCAAAATAAATATGCTAAGCTTTTACCATCAGTAGTTGTATTAGCTATATACTTATGTACAAATATGTTTATTAAT
ACTCTTATGGCAAATAGTAGTGTACCTGTATGGATAGGTTTTTGGTTGCCTCATATCTTTTTTACAATTTTTGCTGTTAG
AACAATTAGAAAAGATAATGGATCTTCTAAGAGGGAAAAATAA

Upstream 100 bases:

>100_bases
CATTAAATTTAAAAGCTAGTAACGTTATCTACTGACTTTTGCTAATAAAAAATATAAAATTGCTAGCAGCGTTATTATTA
TAAATACATAGTGGCATACC

Downstream 100 bases:

>100_bases
TGCTATTGAATCGTATCGATCGTTATATTTTTAGGACCGTATTTAGCAGCTTTCTAATAGTTAGTATAATTTTCTGTATT
TTATTTTTTATCTTTACATA

Product: YjgP/YjgQ permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVSLVAPIAIFLAIVICFGKYF
ANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYLNPLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYI
GNKSGNTLSDVFLYQNTPQDGEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYN
HDRVDRLYMHTLIENFNDKNNGTAYKAEFLGRINNAISVIVSSLLALALCRLRPRQNKYAKLLPSVVVLAIYLCTNMFIN
TLMANSSVPVWIGFWLPHIFFTIFAVRTIRKDNGSSKREK

Sequences:

>Translated_360_residues
MILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVSLVAPIAIFLAIVICFGKYF
ANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYLNPLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYI
GNKSGNTLSDVFLYQNTPQDGEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYN
HDRVDRLYMHTLIENFNDKNNGTAYKAEFLGRINNAISVIVSSLLALALCRLRPRQNKYAKLLPSVVVLAIYLCTNMFIN
TLMANSSVPVWIGFWLPHIFFTIFAVRTIRKDNGSSKREK
>Mature_360_residues
MILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVSLVAPIAIFLAIVICFGKYF
ANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYLNPLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYI
GNKSGNTLSDVFLYQNTPQDGEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYN
HDRVDRLYMHTLIENFNDKNNGTAYKAEFLGRINNAISVIVSSLLALALCRLRPRQNKYAKLLPSVVVLAIYLCTNMFIN
TLMANSSVPVWIGFWLPHIFFTIFAVRTIRKDNGSSKREK

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 40600; Mature: 40600

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENV
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
SLVAPIAIFLAIVICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYL
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NPLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKSGNTLSDVFLYQNTPQD
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCHHHEEEECCCCCC
GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYN
CCEEEEECCCHHHHCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCC
HDRVDRLYMHTLIENFNDKNNGTAYKAEFLGRINNAISVIVSSLLALALCRLRPRQNKYA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
KLLPSVVVLAIYLCTNMFINTLMANSSVPVWIGFWLPHIFFTIFAVRTIRKDNGSSKREK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENV
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
SLVAPIAIFLAIVICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYL
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NPLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKSGNTLSDVFLYQNTPQD
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCHHHEEEECCCCCC
GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYN
CCEEEEECCCHHHHCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCC
HDRVDRLYMHTLIENFNDKNNGTAYKAEFLGRINNAISVIVSSLLALALCRLRPRQNKYA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
KLLPSVVVLAIYLCTNMFINTLMANSSVPVWIGFWLPHIFFTIFAVRTIRKDNGSSKREK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]