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The map label for this gene is 134302287

Identifier: 134302287

GI number: 134302287

Start: 1294896

End: 1295111

Strand: Direct

Name: 134302287

Synonym: FTW_1381

Alternate gene names: NA

Gene position: 1294896-1295111 (Clockwise)

Preceding gene: 134302284

Following gene: 134302290

Centisome position: 68.21

GC content: 33.8

Gene sequence:

>216_bases
ATGCAAAAAAACATATTTAATACTAAAGACTTAGGTTTATTAATTAGGAAAGCTAGAAAAAAACAAGGGTTAACTCAAGC
TGATCTTTCTGGTATTTCTGGGCTAGGAACTAGATTTATAGGCGAAGTCGAAAATGGTAAAAATACGGCTCATATCGGAA
AGGTTATACAACTTGCTAGTAGTTTAGGCTTGGTAATTTCTGTTGGCTGTGATTAG

Upstream 100 bases:

>100_bases
AGGATAAATATATAAAAAGTATATATAATAATACCGTACGGTAATTAATATTATCTTTTTTGAGGTTGCTACATAGATTC
TTACCGATGAGGAATATAAT

Downstream 100 bases:

>100_bases
ATGGAGGACTGATAATGTCTAACCAACTAAATGTCCATTTGAAAGACATACATATTGGATATCTAAAAAAACAAGGTTCA
AAACTAAGCTTTAACTATTC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MQKNIFNTKDLGLLIRKARKKQGLTQADLSGISGLGTRFIGEVENGKNTAHIGKVIQLASSLGLVISVGCD

Sequences:

>Translated_71_residues
MQKNIFNTKDLGLLIRKARKKQGLTQADLSGISGLGTRFIGEVENGKNTAHIGKVIQLASSLGLVISVGCD
>Mature_71_residues
MQKNIFNTKDLGLLIRKARKKQGLTQADLSGISGLGTRFIGEVENGKNTAHIGKVIQLASSLGLVISVGCD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR017507 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 7524; Mature: 7524

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKNIFNTKDLGLLIRKARKKQGLTQADLSGISGLGTRFIGEVENGKNTAHIGKVIQLAS
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHH
SLGLVISVGCD
CCCEEEEECCC
>Mature Secondary Structure
MQKNIFNTKDLGLLIRKARKKQGLTQADLSGISGLGTRFIGEVENGKNTAHIGKVIQLAS
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHH
SLGLVISVGCD
CCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]