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The map label for this gene is recN [H]

Identifier: 134302221

GI number: 134302221

Start: 1225584

End: 1227233

Strand: Reverse

Name: recN [H]

Synonym: FTW_1293

Alternate gene names: 134302221

Gene position: 1227233-1225584 (Counterclockwise)

Preceding gene: 134302222

Following gene: 134302218

Centisome position: 64.64

GC content: 35.94

Gene sequence:

>1650_bases
ATGCTACTACATTTATCAATCAAAAACTTTGCGATTATAAAATCTACTGAAATTGATTTTAGAGAGGGTATGACTGTACT
AACAGGTGAGACTGGCGCGGGTAAGTCAATTCTACTTGATGCGCTTAGTTTTGTACTTGGTGCAAGGTTAGAAAAGACAT
TTCTACAAGATGATAAGCTGACAGAAGTTTCGGCTACTTTTTCTATCAAAGATAATCACAAGGCAAAACGTCTTTTAGAT
GAGCTTTTTATTGATTATGAAAATGATGAATGTACTTTTAGAAGGGTGGTTAATAAATCTAAACAGAGTCGCCTATTTAT
AAATGGTAGTGTTGCCAAAGCTGCAGATGTCAAAAAAGTTTCAGATAAGCTGATAAATATCTATAGTCAAAATTCGCATC
AAGATTTACTTGATCCTAAATCACAGTTAAGCTTGCTAGATAGTTTTGCAAATAATGATGAATTGCTAAAGAAAGTTACG
GATTCATTTTATCAGTTACAAAAAATAAATTCTGAAATAGCACAATTGCAAGAGTATATTGATACACAAAATAGTCAGCG
AGAATTACTTGAGTATAAGCTAGATGAACTAGTTGCTCTAGAGCTCGGTGAAAATGAATTTGAGCAGTTAGCGCAACGCC
AAAAGTGTTTATCAAGTGTTGATGATATCGGCTATAGTCTTAATCATATTACAAGTCTAATGTATGATGATGAGATAAAT
ATAATCGCGATGCTTAGTGAGCTTGAGAAAGAAGTAGCAAAGCTAGATGAAGGAGTATTTAGAAACCTCCAAGAGCTAAT
ATCCCAAACTAAAGTGTACGCTCAAGAAAGTTATGCTGAAGCACAAAACCAACTAGAATCACTAGAGCAAGATCCAGAGG
AGTTGGCAAAAGTAGAGCAACGTATGAGCCAAATATATGATCTTGCACGTAAGCATAAGATTGAGCCTAACTATATGTAT
CAGTATATCCAAGAGTTGCAGACAGAGTTAGATAATTTTACTCAAGATAGTACGCGACTATCACAGTTAAATGAGCAAAA
ACAAAACTTACAACAGCAATACAGTGAATATGCAAATAAGCTTAGTCAAGCACGTAAACAAGCAGCTAAAGAATTCTCAA
AACAAGTTGAGAAAAATATTCGTTCTCTTAATATCCCCAAAGGTAGTTTTGAGGCACAGATTTTGCCGGCCCAAAGCAAA
ACATCTAAAGGTGTAGATGAGTGCCAATTTATGATTAACTTCAACCTTGGTGAGCAACTAGCACCTGTCAAAAAGGTTGC
ATCAGGTGGTGAGCTAAGTAGGATTGGCTTATCGATACAAGCAGTATCAGCAGCAAAAAGATCCTATCCAACTTTAGTTT
TTGATGAGGTTGATGTAGGTATTTCTGGAGCTACTGCGGAGATAGTTGGCAAACTACTCAAAAAACTATCAGAAAGACTA
CAAGTTCTGTGTATAACCCATCAGCCACAAGTTGCTGCTCAAGGTCAGACACATCTACATGTATCTAAGAAGTATCTCAA
AGATACTACAGAATCAAAGATTATAGAACTAAATCAACAGCAGCGTATCGAAGAGATAGCTAAGATAGTCGGCGGTGTAG
ATATCTCAGAAAATACGTTATCTCATGCTAGAGAGCTTTTGGGCTTGTGA

Upstream 100 bases:

>100_bases
TATGTTAGTTTTTAAATATAAAATCGACGGTTTATTACTTGTATAAGTAGACAAGAGCATATATATTAAACTAGTTGTAA
TATTAATCATCTAAAGATCT

Downstream 100 bases:

>100_bases
TTGAATTATGTTGTATGGGCTAACCAATGTGTTAGCCCTTGTGGTATTGGTGCTAAAGAAGGGTTGACACATGGTTCAAC
CCCTACAAAAACTGTTGTCA

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MLLHLSIKNFAIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDDKLTEVSATFSIKDNHKAKRLLD
ELFIDYENDECTFRRVVNKSKQSRLFINGSVAKAADVKKVSDKLINIYSQNSHQDLLDPKSQLSLLDSFANNDELLKKVT
DSFYQLQKINSEIAQLQEYIDTQNSQRELLEYKLDELVALELGENEFEQLAQRQKCLSSVDDIGYSLNHITSLMYDDEIN
IIAMLSELEKEVAKLDEGVFRNLQELISQTKVYAQESYAEAQNQLESLEQDPEELAKVEQRMSQIYDLARKHKIEPNYMY
QYIQELQTELDNFTQDSTRLSQLNEQKQNLQQQYSEYANKLSQARKQAAKEFSKQVEKNIRSLNIPKGSFEAQILPAQSK
TSKGVDECQFMINFNLGEQLAPVKKVASGGELSRIGLSIQAVSAAKRSYPTLVFDEVDVGISGATAEIVGKLLKKLSERL
QVLCITHQPQVAAQGQTHLHVSKKYLKDTTESKIIELNQQQRIEEIAKIVGGVDISENTLSHARELLGL

Sequences:

>Translated_549_residues
MLLHLSIKNFAIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDDKLTEVSATFSIKDNHKAKRLLD
ELFIDYENDECTFRRVVNKSKQSRLFINGSVAKAADVKKVSDKLINIYSQNSHQDLLDPKSQLSLLDSFANNDELLKKVT
DSFYQLQKINSEIAQLQEYIDTQNSQRELLEYKLDELVALELGENEFEQLAQRQKCLSSVDDIGYSLNHITSLMYDDEIN
IIAMLSELEKEVAKLDEGVFRNLQELISQTKVYAQESYAEAQNQLESLEQDPEELAKVEQRMSQIYDLARKHKIEPNYMY
QYIQELQTELDNFTQDSTRLSQLNEQKQNLQQQYSEYANKLSQARKQAAKEFSKQVEKNIRSLNIPKGSFEAQILPAQSK
TSKGVDECQFMINFNLGEQLAPVKKVASGGELSRIGLSIQAVSAAKRSYPTLVFDEVDVGISGATAEIVGKLLKKLSERL
QVLCITHQPQVAAQGQTHLHVSKKYLKDTTESKIIELNQQQRIEEIAKIVGGVDISENTLSHARELLGL
>Mature_549_residues
MLLHLSIKNFAIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDDKLTEVSATFSIKDNHKAKRLLD
ELFIDYENDECTFRRVVNKSKQSRLFINGSVAKAADVKKVSDKLINIYSQNSHQDLLDPKSQLSLLDSFANNDELLKKVT
DSFYQLQKINSEIAQLQEYIDTQNSQRELLEYKLDELVALELGENEFEQLAQRQKCLSSVDDIGYSLNHITSLMYDDEIN
IIAMLSELEKEVAKLDEGVFRNLQELISQTKVYAQESYAEAQNQLESLEQDPEELAKVEQRMSQIYDLARKHKIEPNYMY
QYIQELQTELDNFTQDSTRLSQLNEQKQNLQQQYSEYANKLSQARKQAAKEFSKQVEKNIRSLNIPKGSFEAQILPAQSK
TSKGVDECQFMINFNLGEQLAPVKKVASGGELSRIGLSIQAVSAAKRSYPTLVFDEVDVGISGATAEIVGKLLKKLSERL
QVLCITHQPQVAAQGQTHLHVSKKYLKDTTESKIIELNQQQRIEEIAKIVGGVDISENTLSHARELLGL

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=560, Percent_Identity=38.0357142857143, Blast_Score=351, Evalue=7e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 62204; Mature: 62204

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLHLSIKNFAIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDDKL
CEEEEEECCEEEEEECCCHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
TEVSATFSIKDNHKAKRLLDELFIDYENDECTFRRVVNKSKQSRLFINGSVAKAADVKKV
CHHEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHH
SDKLINIYSQNSHQDLLDPKSQLSLLDSFANNDELLKKVTDSFYQLQKINSEIAQLQEYI
HHHHHHHHCCCCCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTQNSQRELLEYKLDELVALELGENEFEQLAQRQKCLSSVDDIGYSLNHITSLMYDDEIN
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCH
IIAMLSELEKEVAKLDEGVFRNLQELISQTKVYAQESYAEAQNQLESLEQDPEELAKVEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RMSQIYDLARKHKIEPNYMYQYIQELQTELDNFTQDSTRLSQLNEQKQNLQQQYSEYANK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LSQARKQAAKEFSKQVEKNIRSLNIPKGSFEAQILPAQSKTSKGVDECQFMINFNLGEQL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHEEEEEEECCCHHH
APVKKVASGGELSRIGLSIQAVSAAKRSYPTLVFDEVDVGISGATAEIVGKLLKKLSERL
HHHHHHHCCCCCHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH
QVLCITHQPQVAAQGQTHLHVSKKYLKDTTESKIIELNQQQRIEEIAKIVGGVDISENTL
HEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHH
SHARELLGL
HHHHHHHCC
>Mature Secondary Structure
MLLHLSIKNFAIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDDKL
CEEEEEECCEEEEEECCCHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
TEVSATFSIKDNHKAKRLLDELFIDYENDECTFRRVVNKSKQSRLFINGSVAKAADVKKV
CHHEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHH
SDKLINIYSQNSHQDLLDPKSQLSLLDSFANNDELLKKVTDSFYQLQKINSEIAQLQEYI
HHHHHHHHCCCCCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTQNSQRELLEYKLDELVALELGENEFEQLAQRQKCLSSVDDIGYSLNHITSLMYDDEIN
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCH
IIAMLSELEKEVAKLDEGVFRNLQELISQTKVYAQESYAEAQNQLESLEQDPEELAKVEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RMSQIYDLARKHKIEPNYMYQYIQELQTELDNFTQDSTRLSQLNEQKQNLQQQYSEYANK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LSQARKQAAKEFSKQVEKNIRSLNIPKGSFEAQILPAQSKTSKGVDECQFMINFNLGEQL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHEEEEEEECCCHHH
APVKKVASGGELSRIGLSIQAVSAAKRSYPTLVFDEVDVGISGATAEIVGKLLKKLSERL
HHHHHHHCCCCCHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH
QVLCITHQPQVAAQGQTHLHVSKKYLKDTTESKIIELNQQQRIEEIAKIVGGVDISENTL
HEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHH
SHARELLGL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA