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The map label for this gene is kdsC [H]

Identifier: 134301927

GI number: 134301927

Start: 899010

End: 899558

Strand: Reverse

Name: kdsC [H]

Synonym: FTW_0934

Alternate gene names: 134301927

Gene position: 899558-899010 (Counterclockwise)

Preceding gene: 134301928

Following gene: 134301926

Centisome position: 47.38

GC content: 31.88

Gene sequence:

>549_bases
ATGAAAATAAATCACTCAAGAAACTCAATAAATATTAAACTGTTGATTCTCGATGTAGATGGTGTGTTAACAGATGGCAA
AATAATAGTAACTAATGATGGTGACGAGCTTAAAAATTTTGATGTCAAAGATGGTTTAGGGATTGTCCTTATGCAGAAAC
TTGGAATCAAAGTTGCTATTATCACAGGTAAACAATCAAAAATTGTTGATGATAGATTTAAAAACTTAGGATTAGATCCT
GAAGATATTTTGCAAGGTCAAAAAAATAAACTAAAAGCTTATGAATTTCTCAAGTCAAAATATAAGCTAAATGATAGTGA
TATAGCATATATGGGAGATGATTTGCCAGATATAATCTTGATGAATAAAGTAGCCATTTCTGCAGCACCAGCTGATGCTA
TGGCTATTGCCAAAGATTATGCTGATTATGTTTGTAAAGCTGATGGCGGTGCTGGTGCAGTAAGAGAATTTTGTGAATAT
CTAATCAAACAATTAAATCTCTATGACAAGATTGTGGATGATTATATTCAAAGTGGCGGAGTGAGATAA

Upstream 100 bases:

>100_bases
CTACAAATAGTTTATTCTTTTGTTTTTAATATATTTTAGTCTTTTTATCATTTGTGATAATATCTTTGGTTGAAGTTAAT
AATTCTTTTTAAACTTAATA

Downstream 100 bases:

>100_bases
ATAAGTAATGAAGTTTTTTACAAAATACTCCTTATTTGCGAATGTACTCTCTATAATTGTAATTATTTTTTCAATGCTGT
ATATAAGCTATAATGCTCTA

Product: YrbI family phosphatase

Products: NA

Alternate protein names: KDO 8-P phosphatase [H]

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKINHSRNSINIKLLILDVDGVLTDGKIIVTNDGDELKNFDVKDGLGIVLMQKLGIKVAIITGKQSKIVDDRFKNLGLDP
EDILQGQKNKLKAYEFLKSKYKLNDSDIAYMGDDLPDIILMNKVAISAAPADAMAIAKDYADYVCKADGGAGAVREFCEY
LIKQLNLYDKIVDDYIQSGGVR

Sequences:

>Translated_182_residues
MKINHSRNSINIKLLILDVDGVLTDGKIIVTNDGDELKNFDVKDGLGIVLMQKLGIKVAIITGKQSKIVDDRFKNLGLDP
EDILQGQKNKLKAYEFLKSKYKLNDSDIAYMGDDLPDIILMNKVAISAAPADAMAIAKDYADYVCKADGGAGAVREFCEY
LIKQLNLYDKIVDDYIQSGGVR
>Mature_182_residues
MKINHSRNSINIKLLILDVDGVLTDGKIIVTNDGDELKNFDVKDGLGIVLMQKLGIKVAIITGKQSKIVDDRFKNLGLDP
EDILQGQKNKLKAYEFLKSKYKLNDSDIAYMGDDLPDIILMNKVAISAAPADAMAIAKDYADYVCKADGGAGAVREFCEY
LIKQLNLYDKIVDDYIQSGGVR

Specific function: Catalyzes the hydrolysis of KDO 8-P to KDO and inorganic phosphate [H]

COG id: COG1778

COG function: function code R; Low specificity phosphatase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdsC family [H]

Homologues:

Organism=Homo sapiens, GI8923900, Length=151, Percent_Identity=35.7615894039735, Blast_Score=102, Evalue=2e-22,
Organism=Escherichia coli, GI2367202, Length=152, Percent_Identity=50, Blast_Score=137, Evalue=6e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006549
- InterPro:   IPR010023 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.45 [H]

Molecular weight: Translated: 20089; Mature: 20089

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINHSRNSINIKLLILDVDGVLTDGKIIVTNDGDELKNFDVKDGLGIVLMQKLGIKVAI
CCCCCCCCEEEEEEEEEECCCEEECCEEEEECCCCHHCCCCCCCCCHHHHHHHCCEEEEE
ITGKQSKIVDDRFKNLGLDPEDILQGQKNKLKAYEFLKSKYKLNDSDIAYMGDDLPDIIL
EECCCCHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH
MNKVAISAAPADAMAIAKDYADYVCKADGGAGAVREFCEYLIKQLNLYDKIVDDYIQSGG
HHHHHEECCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VR
CC
>Mature Secondary Structure
MKINHSRNSINIKLLILDVDGVLTDGKIIVTNDGDELKNFDVKDGLGIVLMQKLGIKVAI
CCCCCCCCEEEEEEEEEECCCEEECCEEEEECCCCHHCCCCCCCCCHHHHHHHCCEEEEE
ITGKQSKIVDDRFKNLGLDPEDILQGQKNKLKAYEFLKSKYKLNDSDIAYMGDDLPDIIL
EECCCCHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH
MNKVAISAAPADAMAIAKDYADYVCKADGGAGAVREFCEYLIKQLNLYDKIVDDYIQSGG
HHHHHEECCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]