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The map label for this gene is rocE [H]

Identifier: 134301885

GI number: 134301885

Start: 850364

End: 851731

Strand: Reverse

Name: rocE [H]

Synonym: FTW_0884

Alternate gene names: 134301885

Gene position: 851731-850364 (Counterclockwise)

Preceding gene: 134301897

Following gene: 134301884

Centisome position: 44.86

GC content: 30.12

Gene sequence:

>1368_bases
ATGGATAATAATCAAGACAAATTAAAAAGAGATATTTTATCACGTCATATCGTTATGATTTCTTTAGGTGGGACTATTTC
AGCAAGTTTTTTCCTTGGCATAGGAAGTATTCTAAATACTGTTGGAGCATTTGGCACCGTAATAGGATTTTTTATTGGTG
GCATAATAATGATGTTAGTAATGATCAGCTTGACTGAGATGGCTATTGAAATGCCTATAAGTGGTTCATTTCAAAGCTAT
GCAACCAAATTTATATCACCATATTCAGGATTCCTAACAGGTTGGTTATATTTATTAAATTGGTTGACTGCGGCAGCTGG
AGGACTTGTTGCAGCAGGGATTATTTGTAATAATTTCTACCCTGCTATTAGTGTTTGGCAATTCTGCTTAGCTATTATAC
TAATTGTCAGTTTGCTAAATTTATGTGCAGTTAGAGTATTTGCAGAAATAGAGTTTTGGCTATCAGCTATAAAAATTATA
ACTATCATAATTTTTATAATAATAGGAATTGGTATTATTGGTGGTTTTTTACATTCTAATAAGCCTATTGCAGGATTAGT
CAATTTTTATGTAGATGGACTTTTTCCAAATGGTTTTAAAGCTTTTTTATTTGGTTTAGTAATTATAGTCTGTACTTTCC
AAGGTGCTGAAGTAGTTGGTATAGCAGCTGGAGAAACTAAAGAACCTGAAAAAAATATTCGTAAAGCTATTAGAAGTGTG
GCTGTTAGAATACTTTTATTTTTTGTATTCTCATCCTTTATCATAGCTTATGTTATTCCATATAAAGATTCCGGAATTAC
TAACACTCCTTTTGTGACAGTATTACAATTAGTCAATATTAAATATGTTGATACGATTATGCAGCTAGTAATTCTCTCAG
CAAGTCTTTCTGCTGTTAATTCATGTTTTTATACTTGTGCAAGGCTAATGTGGTCGATGGCAGAAGCTAATCAAGCCCCA
AAAATTTTTGCTAAAATTAGTAAAAAACAGGTCCCTATATATGGTGTAGTATTTGTAGCATTATTATCATGTATTTGCTT
AATCACAAAATTTATTGGAGCTGAAAAAATATTTATATTAGTAATATCATCTTCTGGTATGGTTGGATGTATGATATGGA
TTATAATTAGTATGTGTCATATATATTTTAGAAAATCTCTTACAGCATCACAAATTGAAAGTTTACGTTTTAAAGCATGG
GGATTTCCTTTGATACCTTATACAAGCATTTTGTTTAACTCATGTGTCATATTAGCAATGTTTTGGGATCCTGAACAACG
TATGGTTGTATACTCAGGTGTAATATTAATTTTGTTATTTTCATTTCTATATAAGTTTTATTATAAAAAAATAATAGTAA
AAACTTGA

Upstream 100 bases:

>100_bases
AATAATAATTTTACAAATTCAATTTAGTGATAAAACATTTCTTGACCAATATTGATTATGAAATACTCTATCTTAGTAGT
AACTATCAACAAATATAAAA

Downstream 100 bases:

>100_bases
TAAACTATTAATTTAATAGTACTATTAAAAAATAGTATGGAACAATAAGATATGAAAGATTATCAAAGTTTAACAGAACA
AATCAATAATATTGAGAATA

Product: amino-acid permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MDNNQDKLKRDILSRHIVMISLGGTISASFFLGIGSILNTVGAFGTVIGFFIGGIIMMLVMISLTEMAIEMPISGSFQSY
ATKFISPYSGFLTGWLYLLNWLTAAAGGLVAAGIICNNFYPAISVWQFCLAIILIVSLLNLCAVRVFAEIEFWLSAIKII
TIIIFIIIGIGIIGGFLHSNKPIAGLVNFYVDGLFPNGFKAFLFGLVIIVCTFQGAEVVGIAAGETKEPEKNIRKAIRSV
AVRILLFFVFSSFIIAYVIPYKDSGITNTPFVTVLQLVNIKYVDTIMQLVILSASLSAVNSCFYTCARLMWSMAEANQAP
KIFAKISKKQVPIYGVVFVALLSCICLITKFIGAEKIFILVISSSGMVGCMIWIIISMCHIYFRKSLTASQIESLRFKAW
GFPLIPYTSILFNSCVILAMFWDPEQRMVVYSGVILILLFSFLYKFYYKKIIVKT

Sequences:

>Translated_455_residues
MDNNQDKLKRDILSRHIVMISLGGTISASFFLGIGSILNTVGAFGTVIGFFIGGIIMMLVMISLTEMAIEMPISGSFQSY
ATKFISPYSGFLTGWLYLLNWLTAAAGGLVAAGIICNNFYPAISVWQFCLAIILIVSLLNLCAVRVFAEIEFWLSAIKII
TIIIFIIIGIGIIGGFLHSNKPIAGLVNFYVDGLFPNGFKAFLFGLVIIVCTFQGAEVVGIAAGETKEPEKNIRKAIRSV
AVRILLFFVFSSFIIAYVIPYKDSGITNTPFVTVLQLVNIKYVDTIMQLVILSASLSAVNSCFYTCARLMWSMAEANQAP
KIFAKISKKQVPIYGVVFVALLSCICLITKFIGAEKIFILVISSSGMVGCMIWIIISMCHIYFRKSLTASQIESLRFKAW
GFPLIPYTSILFNSCVILAMFWDPEQRMVVYSGVILILLFSFLYKFYYKKIIVKT
>Mature_455_residues
MDNNQDKLKRDILSRHIVMISLGGTISASFFLGIGSILNTVGAFGTVIGFFIGGIIMMLVMISLTEMAIEMPISGSFQSY
ATKFISPYSGFLTGWLYLLNWLTAAAGGLVAAGIICNNFYPAISVWQFCLAIILIVSLLNLCAVRVFAEIEFWLSAIKII
TIIIFIIIGIGIIGGFLHSNKPIAGLVNFYVDGLFPNGFKAFLFGLVIIVCTFQGAEVVGIAAGETKEPEKNIRKAIRSV
AVRILLFFVFSSFIIAYVIPYKDSGITNTPFVTVLQLVNIKYVDTIMQLVILSASLSAVNSCFYTCARLMWSMAEANQAP
KIFAKISKKQVPIYGVVFVALLSCICLITKFIGAEKIFILVISSSGMVGCMIWIIISMCHIYFRKSLTASQIESLRFKAW
GFPLIPYTSILFNSCVILAMFWDPEQRMVVYSGVILILLFSFLYKFYYKKIIVKT

Specific function: Putative transport protein involved in arginine degradative pathway. Probably transports arginine or ornithine [H]

COG id: COG0833

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Amino acid transporter (AAT) (TC 2.A.3.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081708, Length=445, Percent_Identity=34.3820224719101, Blast_Score=295, Evalue=4e-81,
Organism=Escherichia coli, GI48994972, Length=453, Percent_Identity=35.0993377483444, Blast_Score=271, Evalue=9e-74,
Organism=Escherichia coli, GI1788480, Length=459, Percent_Identity=33.7690631808279, Blast_Score=270, Evalue=1e-73,
Organism=Escherichia coli, GI1786302, Length=434, Percent_Identity=32.258064516129, Blast_Score=251, Evalue=9e-68,
Organism=Escherichia coli, GI1786602, Length=456, Percent_Identity=32.2368421052632, Blast_Score=246, Evalue=2e-66,
Organism=Escherichia coli, GI1789017, Length=433, Percent_Identity=32.1016166281755, Blast_Score=243, Evalue=2e-65,
Organism=Escherichia coli, GI1786789, Length=444, Percent_Identity=31.3063063063063, Blast_Score=239, Evalue=2e-64,
Organism=Escherichia coli, GI1790653, Length=395, Percent_Identity=31.6455696202532, Blast_Score=223, Evalue=1e-59,
Organism=Escherichia coli, GI87081915, Length=416, Percent_Identity=29.8076923076923, Blast_Score=215, Evalue=4e-57,
Organism=Escherichia coli, GI87081869, Length=359, Percent_Identity=21.4484679665738, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87082023, Length=361, Percent_Identity=22.7146814404432, Blast_Score=63, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6320772, Length=429, Percent_Identity=30.0699300699301, Blast_Score=204, Evalue=3e-53,
Organism=Saccharomyces cerevisiae, GI6324061, Length=433, Percent_Identity=31.4087759815243, Blast_Score=203, Evalue=4e-53,
Organism=Saccharomyces cerevisiae, GI6324553, Length=472, Percent_Identity=29.4491525423729, Blast_Score=190, Evalue=5e-49,
Organism=Saccharomyces cerevisiae, GI6322892, Length=422, Percent_Identity=31.9905213270142, Blast_Score=187, Evalue=4e-48,
Organism=Saccharomyces cerevisiae, GI6324059, Length=435, Percent_Identity=28.735632183908, Blast_Score=176, Evalue=9e-45,
Organism=Saccharomyces cerevisiae, GI6324990, Length=491, Percent_Identity=27.2912423625255, Blast_Score=167, Evalue=4e-42,
Organism=Saccharomyces cerevisiae, GI6324924, Length=483, Percent_Identity=26.9151138716356, Blast_Score=166, Evalue=6e-42,
Organism=Saccharomyces cerevisiae, GI6321053, Length=430, Percent_Identity=27.2093023255814, Blast_Score=161, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6319543, Length=441, Percent_Identity=27.891156462585, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6319824, Length=442, Percent_Identity=27.8280542986425, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6320717, Length=402, Percent_Identity=27.1144278606965, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6320251, Length=440, Percent_Identity=25.6818181818182, Blast_Score=149, Evalue=8e-37,
Organism=Saccharomyces cerevisiae, GI6321629, Length=404, Percent_Identity=26.4851485148515, Blast_Score=148, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6322967, Length=400, Percent_Identity=29.25, Blast_Score=143, Evalue=7e-35,
Organism=Saccharomyces cerevisiae, GI6319542, Length=440, Percent_Identity=25.9090909090909, Blast_Score=140, Evalue=3e-34,
Organism=Saccharomyces cerevisiae, GI6319608, Length=485, Percent_Identity=25.1546391752577, Blast_Score=139, Evalue=8e-34,
Organism=Saccharomyces cerevisiae, GI6324981, Length=389, Percent_Identity=29.305912596401, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6320364, Length=488, Percent_Identity=23.7704918032787, Blast_Score=99, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004840 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50371; Mature: 50371

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7540694; 9384377 [H]