| Definition | Francisella tularensis subsp. tularensis WY96-3418, complete genome. |
|---|---|
| Accession | NC_009257 |
| Length | 1,898,476 |
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The map label for this gene is dtpA [H]
Identifier: 134301862
GI number: 134301862
Start: 826307
End: 827848
Strand: Reverse
Name: dtpA [H]
Synonym: FTW_0851
Alternate gene names: 134301862
Gene position: 827848-826307 (Counterclockwise)
Preceding gene: 134301863
Following gene: 134301860
Centisome position: 43.61
GC content: 35.34
Gene sequence:
>1542_bases GTGACTATTAGTGATGTGACTCATTCGAAAAATAATAATATTACACCATTTTGGGTTCTTTGGACTTTGGAGTTATGGGA GAGATTTGGTTATTATGGTCTACAAGCTATATTAGCTATATATTTTGCTAGAAAATTAGTTTTCAGTGATGCCGAAGCAA TGTTAATCTTTGGTTCTTTTTCGGCATTATTATATGGAGGTCCATTAATCGGTGGTTGGATTGGCGATAGCTACCTTGGT GCAAAGCGTACAATATTTATTGGCGCTGGGATTTTATTTTTATCATATATATCACTTAGTTTTAGTACATTTATTGCCGA GTATCTAGGCAGTACAGAAAAGACGGTTGTTATGTACTCACTAGCTGGTGTTGCTATTGGTGGGGGTCTCTTTAAAGCTA ACCCTACTTCTTTAATCTCTAAGTTATTTGAAAAAGGTGATCCTGCTTTAGATGGGGCTATGACACTATATTATATGGCT ATTAATATTGGTTCTTTTGTATCTATGCTTCTTACCCCTATAGTAGCGGCTAAATATGGTTATCTTCATGCTTTTTTATG TTCAGCTATTGGGATGTTTCTAGGATTAATTAGCTACACTATTTTCTATCCGAAAATTAAAAGAATCTCAACAGAAGCTG GTAGACAGAAGATGTCTTGGTTTAAGGTTTTTGTGGTACTTTTAGGAGCTTGTATAGCAATCTTTATAATAGGTAATATA CTTGAGAATACTACTTTGTGTACTAGTATAGTTGTTGTAATAGCGATACTTGCTTTGGTATATTTTTTTATACAAATGTT GAAACAAGCTGAGCATGAAAGAAAAAGGATGATTGTAGCTTTGATATTAATTATTCAAGGAATTATCTTCTTTGTATTGT ATCAGCAAATGCCTACTTCTCTTAATTTCTTTGCAGTTAATAATGTCGATCCTCACTTTTTAGGCATGAATGTACACGGT GAGCAATGGCAGGTACTTAATCCTCTAGTAATAGTATTAATGTCACCAATCCTATCGGTTGTGTATAATAAAATACCTGG AACTCATGTCACAAAATTTTGTTTTGGTATGACTTTATGTGCATTAGCATTTTTAGTACTATACTTTCCACAATTTACCG CGACTAATGGTGTAGTATCTGGTTGGTGGTTAGTTGCAAGTTACTTCTTCCAATCTACTGGTGAGCTTCTAATCTCAGCA TTAGGTTTATCTATGGTTGCTGAACTATTCCCAAGAAATATGAGTGGTCTTGCACAAGGTATGTGGCTACTTACTACAAT GGTGGCTGGTCCAATTGGTGGTTATGTAGGTGCTTTGACAGCTCCAGCAGCAGGTACTGTATTTACGAAGGTCGAAGGAC TAGCTGTTTATGGTCATGTCTTTTTAACTATAGGTATTTTTGTCGCTGTAATTGCTGCTATTATGTGGATTGCTCGCGGA TGGCTAAATGCTATTATCGAGAGTACTAGAGTACATTTTGTATCAGAAGGTACTCATGGTATGCACGAAGAGACTGCTGT TTTACCTACACAAAATAATTAA
Upstream 100 bases:
>100_bases CTATTCATTTCTAATTGTTTTTAAGTTTTAAATGCTCTATGATGATTTTTTGACCTTTTTAAAAAGGTTAACTTATATTG TTTAAAATAGGAGAATAATT
Downstream 100 bases:
>100_bases TCTTTTGCCTTTGGTTTTCTAACACTTTTATTTTGATGTATTTTTTGTCTAATTTTTTTAGCAAAATCATTCTTATTAGA AGGTTTTTTGTTGTTATTGT
Product: amino acid/peptide transporter (peptide:H+ symporter)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MTISDVTHSKNNNITPFWVLWTLELWERFGYYGLQAILAIYFARKLVFSDAEAMLIFGSFSALLYGGPLIGGWIGDSYLG AKRTIFIGAGILFLSYISLSFSTFIAEYLGSTEKTVVMYSLAGVAIGGGLFKANPTSLISKLFEKGDPALDGAMTLYYMA INIGSFVSMLLTPIVAAKYGYLHAFLCSAIGMFLGLISYTIFYPKIKRISTEAGRQKMSWFKVFVVLLGACIAIFIIGNI LENTTLCTSIVVVIAILALVYFFIQMLKQAEHERKRMIVALILIIQGIIFFVLYQQMPTSLNFFAVNNVDPHFLGMNVHG EQWQVLNPLVIVLMSPILSVVYNKIPGTHVTKFCFGMTLCALAFLVLYFPQFTATNGVVSGWWLVASYFFQSTGELLISA LGLSMVAELFPRNMSGLAQGMWLLTTMVAGPIGGYVGALTAPAAGTVFTKVEGLAVYGHVFLTIGIFVAVIAAIMWIARG WLNAIIESTRVHFVSEGTHGMHEETAVLPTQNN
Sequences:
>Translated_513_residues MTISDVTHSKNNNITPFWVLWTLELWERFGYYGLQAILAIYFARKLVFSDAEAMLIFGSFSALLYGGPLIGGWIGDSYLG AKRTIFIGAGILFLSYISLSFSTFIAEYLGSTEKTVVMYSLAGVAIGGGLFKANPTSLISKLFEKGDPALDGAMTLYYMA INIGSFVSMLLTPIVAAKYGYLHAFLCSAIGMFLGLISYTIFYPKIKRISTEAGRQKMSWFKVFVVLLGACIAIFIIGNI LENTTLCTSIVVVIAILALVYFFIQMLKQAEHERKRMIVALILIIQGIIFFVLYQQMPTSLNFFAVNNVDPHFLGMNVHG EQWQVLNPLVIVLMSPILSVVYNKIPGTHVTKFCFGMTLCALAFLVLYFPQFTATNGVVSGWWLVASYFFQSTGELLISA LGLSMVAELFPRNMSGLAQGMWLLTTMVAGPIGGYVGALTAPAAGTVFTKVEGLAVYGHVFLTIGIFVAVIAAIMWIARG WLNAIIESTRVHFVSEGTHGMHEETAVLPTQNN >Mature_512_residues TISDVTHSKNNNITPFWVLWTLELWERFGYYGLQAILAIYFARKLVFSDAEAMLIFGSFSALLYGGPLIGGWIGDSYLGA KRTIFIGAGILFLSYISLSFSTFIAEYLGSTEKTVVMYSLAGVAIGGGLFKANPTSLISKLFEKGDPALDGAMTLYYMAI NIGSFVSMLLTPIVAAKYGYLHAFLCSAIGMFLGLISYTIFYPKIKRISTEAGRQKMSWFKVFVVLLGACIAIFIIGNIL ENTTLCTSIVVVIAILALVYFFIQMLKQAEHERKRMIVALILIIQGIIFFVLYQQMPTSLNFFAVNNVDPHFLGMNVHGE QWQVLNPLVIVLMSPILSVVYNKIPGTHVTKFCFGMTLCALAFLVLYFPQFTATNGVVSGWWLVASYFFQSTGELLISAL GLSMVAELFPRNMSGLAQGMWLLTTMVAGPIGGYVGALTAPAAGTVFTKVEGLAVYGHVFLTIGIFVAVIAAIMWIARGW LNAIIESTRVHFVSEGTHGMHEETAVLPTQNN
Specific function: Proton-dependent permease that transports di- and tripeptides [H]
COG id: COG3104
COG function: function code E; Dipeptide/tripeptide permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpA subfamily [H]
Homologues:
Organism=Homo sapiens, GI4827008, Length=376, Percent_Identity=25.531914893617, Blast_Score=82, Evalue=2e-15, Organism=Escherichia coli, GI1787922, Length=462, Percent_Identity=44.1558441558442, Blast_Score=370, Evalue=1e-103, Organism=Escherichia coli, GI1789911, Length=485, Percent_Identity=40, Blast_Score=351, Evalue=8e-98, Organism=Escherichia coli, GI1790572, Length=471, Percent_Identity=26.1146496815287, Blast_Score=146, Evalue=4e-36, Organism=Escherichia coli, GI1786927, Length=475, Percent_Identity=24.2105263157895, Blast_Score=131, Evalue=9e-32, Organism=Caenorhabditis elegans, GI17541704, Length=390, Percent_Identity=25.1282051282051, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17569141, Length=167, Percent_Identity=26.9461077844311, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71987453, Length=167, Percent_Identity=28.7425149700599, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24639583, Length=330, Percent_Identity=27.2727272727273, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI24639585, Length=330, Percent_Identity=27.2727272727273, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI24639581, Length=329, Percent_Identity=27.0516717325228, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI28571098, Length=331, Percent_Identity=25.9818731117825, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI28571102, Length=331, Percent_Identity=25.9818731117825, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI28571100, Length=331, Percent_Identity=25.9818731117825, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR000109 - InterPro: IPR005279 - InterPro: IPR018456 [H]
Pfam domain/function: PF00854 PTR2 [H]
EC number: NA
Molecular weight: Translated: 56312; Mature: 56180
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISDVTHSKNNNITPFWVLWTLELWERFGYYGLQAILAIYFARKLVFSDAEAMLIFGSF CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHH SALLYGGPLIGGWIGDSYLGAKRTIFIGAGILFLSYISLSFSTFIAEYLGSTEKTVVMYS HHHHHCCCEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE LAGVAIGGGLFKANPTSLISKLFEKGDPALDGAMTLYYMAINIGSFVSMLLTPIVAAKYG HHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLHAFLCSAIGMFLGLISYTIFYPKIKRISTEAGRQKMSWFKVFVVLLGACIAIFIIGNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LENTTLCTSIVVVIAILALVYFFIQMLKQAEHERKRMIVALILIIQGIIFFVLYQQMPTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LNFFAVNNVDPHFLGMNVHGEQWQVLNPLVIVLMSPILSVVYNKIPGTHVTKFCFGMTLC EEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ALAFLVLYFPQFTATNGVVSGWWLVASYFFQSTGELLISALGLSMVAELFPRNMSGLAQG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH MWLLTTMVAGPIGGYVGALTAPAAGTVFTKVEGLAVYGHVFLTIGIFVAVIAAIMWIARG HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WLNAIIESTRVHFVSEGTHGMHEETAVLPTQNN HHHHHHHHHHHEEEECCCCCCCCCCEECCCCCC >Mature Secondary Structure TISDVTHSKNNNITPFWVLWTLELWERFGYYGLQAILAIYFARKLVFSDAEAMLIFGSF CCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHH SALLYGGPLIGGWIGDSYLGAKRTIFIGAGILFLSYISLSFSTFIAEYLGSTEKTVVMYS HHHHHCCCEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE LAGVAIGGGLFKANPTSLISKLFEKGDPALDGAMTLYYMAINIGSFVSMLLTPIVAAKYG HHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLHAFLCSAIGMFLGLISYTIFYPKIKRISTEAGRQKMSWFKVFVVLLGACIAIFIIGNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LENTTLCTSIVVVIAILALVYFFIQMLKQAEHERKRMIVALILIIQGIIFFVLYQQMPTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LNFFAVNNVDPHFLGMNVHGEQWQVLNPLVIVLMSPILSVVYNKIPGTHVTKFCFGMTLC EEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ALAFLVLYFPQFTATNGVVSGWWLVASYFFQSTGELLISALGLSMVAELFPRNMSGLAQG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH MWLLTTMVAGPIGGYVGALTAPAAGTVFTKVEGLAVYGHVFLTIGIFVAVIAAIMWIARG HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WLNAIIESTRVHFVSEGTHGMHEETAVLPTQNN HHHHHHHHHHHEEEECCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA