| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
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The map label for this gene is 117621605
Identifier: 117621605
GI number: 117621605
Start: 26531
End: 27181
Strand: Direct
Name: 117621605
Synonym: BAPKO_2034
Alternate gene names: NA
Gene position: 26531-27181 (Clockwise)
Preceding gene: 117621603
Following gene: 117621606
Centisome position: 44.25
GC content: 31.03
Gene sequence:
>651_bases ATGAAAGGAATAAGTATTTTATCATTACTATTATTGGCATTTTCTTGCAAACAATATGGTAGTGTTAAGGCACTCACAGA AATTGCTTCTGATTCTGGAGATAATAATTCTCTTGTCGTTAGTGATAATTTATCAGCTAAAGAGCTGATTGCCGAAAAAG GGCCTACTTTAACATCACAGGAATCTGAAAGATTAGAGGCTTTAAAAACCTTTTTAAAAGACGCAATGGGTGTTAATGGA AGAGAAGATAATTTAAAAGCCGAGTACGAGAAATCTTATAAAGAATTTTTTGATTGGCTTTCTAAGGATGTTAACAAGCA AAAAGAGTTTGTAAGTTGTTTTAACAATATTTGTGGCATTGTTACTAAAGCAGTAGATGCAGACAAACAAAGACGTCATG ATCAAAAATCCCTAGGTTTTAATGAATATGTTTGTCACAAAATTAAAAATAGCACAGGTGGAGCTTTAAGTTTATTTTTC CAAAAAGTAGCTGATGCATTTGGTGCTGAAGAGTACAAAAAGAAAGATGATGAGAGCAGTCAAAAGCCTGAGAAATGCAA TGAAGAGATTTTCAAAGTAATCAAAAGAGTGTTTACAGAAAGTGATAGTAATAATGAATTAAAAAATTTAAAAAATCATG GAAATATCTAA
Upstream 100 bases:
>100_bases TTTAATAGCAAAGAACAAAATTAATCAGGGTGATTTTTTGTATTGTTTGATAATGTTGAAAAATGAACTATAATGGCGAC TTATTTTATGGGAGGTTTTA
Downstream 100 bases:
>100_bases ACATTTGAGGTATGTTTTTATAAAAGGCAGGTTCTAATGAGAACTTGTCTTTTTTGTGCTTTAAGAGACTTTTGAGGTGC TTTTGCAAGGTTGTATCTTT
Product: lipoprotein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKGISILSLLLLAFSCKQYGSVKALTEIASDSGDNNSLVVSDNLSAKELIAEKGPTLTSQESERLEALKTFLKDAMGVNG REDNLKAEYEKSYKEFFDWLSKDVNKQKEFVSCFNNICGIVTKAVDADKQRRHDQKSLGFNEYVCHKIKNSTGGALSLFF QKVADAFGAEEYKKKDDESSQKPEKCNEEIFKVIKRVFTESDSNNELKNLKNHGNI
Sequences:
>Translated_216_residues MKGISILSLLLLAFSCKQYGSVKALTEIASDSGDNNSLVVSDNLSAKELIAEKGPTLTSQESERLEALKTFLKDAMGVNG REDNLKAEYEKSYKEFFDWLSKDVNKQKEFVSCFNNICGIVTKAVDADKQRRHDQKSLGFNEYVCHKIKNSTGGALSLFF QKVADAFGAEEYKKKDDESSQKPEKCNEEIFKVIKRVFTESDSNNELKNLKNHGNI >Mature_216_residues MKGISILSLLLLAFSCKQYGSVKALTEIASDSGDNNSLVVSDNLSAKELIAEKGPTLTSQESERLEALKTFLKDAMGVNG REDNLKAEYEKSYKEFFDWLSKDVNKQKEFVSCFNNICGIVTKAVDADKQRRHDQKSLGFNEYVCHKIKNSTGGALSLFF QKVADAFGAEEYKKKDDESSQKPEKCNEEIFKVIKRVFTESDSNNELKNLKNHGNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24257; Mature: 24257
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGISILSLLLLAFSCKQYGSVKALTEIASDSGDNNSLVVSDNLSAKELIAEKGPTLTSQ CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHCCCCCCCH ESERLEALKTFLKDAMGVNGREDNLKAEYEKSYKEFFDWLSKDVNKQKEFVSCFNNICGI HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTKAVDADKQRRHDQKSLGFNEYVCHKIKNSTGGALSLFFQKVADAFGAEEYKKKDDESS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCC QKPEKCNEEIFKVIKRVFTESDSNNELKNLKNHGNI CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC >Mature Secondary Structure MKGISILSLLLLAFSCKQYGSVKALTEIASDSGDNNSLVVSDNLSAKELIAEKGPTLTSQ CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHCCCCCCCH ESERLEALKTFLKDAMGVNGREDNLKAEYEKSYKEFFDWLSKDVNKQKEFVSCFNNICGI HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTKAVDADKQRRHDQKSLGFNEYVCHKIKNSTGGALSLFFQKVADAFGAEEYKKKDDESS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCC QKPEKCNEEIFKVIKRVFTESDSNNELKNLKNHGNI CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA