gi|340783625|ref|NC_015851.1|  Acidithiobacillus caldus SM-1 megaplasmid, complete sequence. [asmbl_id: NC_015851].251782, gc%: 57.20%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
152270..152283                     attL                                                                                 N/A                 CTATCTGCCTGCGC
complement(161578..163101)         PROPHAGE_Escher_CFT073: transposase; Atc_m164; phage(gi26248360)                     2e-17               MFTIRQILVRMRQGDTDRSIARAGLMGRKKLGVLRRQATRLGWLDSHTPLPEDGELATVFQRRSESQPAQCQSSLRDHEQRIAEWVAQGIQATTIHAALVRQYGFPGSYSAVKRLVRRIRQAVPPKVTSRLVFAPGEAAQVDFGAGPLLADPRTGELRKTWFFVMTLCWSRHQYAEFVWDQSVTTWLACHRHAFSWFGGVPTRIIIDNAKCAITKACINDPAVQRAYGEYAEGYGFRIDPCPPRDPQKKGIVEAGVKYIKRSFLPLREFRDRDDAQQQLREWVLGEAGNRVHGTTRQVPLTQFAQVERALLQPLPTNPPEICTWARPKVGQDGHVQFARCHYSVPFRFVGQSLWLRATDTTVRIYAEHELVATHPRLFQAGSFATVLDHLPPEAEAWQRQDLQWCLEMARGIGPHCHGVVHQLFADRQLANLRPVQNLLRLRLKYSPERLEAACARALHFGNARYQSVASILKHGTDQEPLPQQDLASDSTYTRGGRFLRDSKTLFH
163432..165885                     PHAGE_Bacill_SP10: SNF2 family helicase; Atc_m165; phage(gi418489568)                7e-15               MPLLMAMRLSTVRLLIADDVGVGKTIEAGLIARELMDRGEIRRLAVLCPPHLVEQWQNELENRFNLQTVALTSASAPRIERDLPHGVGLFDYHPVVVVSLDYVKSERHRAHFLTIAPECVIVDEAHTCASSGQGRQLRFQLLQQLSQNPERHLMLLTATPHSGDETAFYNLLSLLDPRFQELQGHTTANDSLRLELARHFVQRRRKDIAEWQAETGDGRGFPRRMKAEITYPLSGDWGAFFDAVQNYCRELAEDIEAREAGHARLVWYATLALLRCVASSPAAAVKALTTRLDNTLSDNEWLTDERLYDGEADDLDSNDLEPPAQMVHAGHLQTLIGEAERLSGQADDPKLAVLILHLRELLKEGFHPVVFCRYIATAHYVTEHLKKVFPKAVIDAVTGEYTPEERRERVEALSEGDSRILVATDCLSEGINLQHLFTAVIHYDLAWNPTRHEQREGRVDRFGQQAPEVRCTMLYGQDNPVDGFVLNVILRKGEAIEKELGVLVPMPEDEARIKQALVKAALMKRSNTHTAQLGFDFGESEQILAPLQARWQDALQKAKANRTVFAQRRIRPDEVLPEWQKEQQALGTQADVQRFVHSACSRLNAPLEKARTEQFRLLPQHLPEALRLRLADEGINEALTIDFNTLHRSHPLVTVLADYLLETSLADGSPIAARCAATITDAVDVVTTLYLLRLRHQISYVRRREPFQMMAEETITLAARGRNQPEWLSDVSVNALLECTPTGNMPSEGEQRELRTALDFLRAHPQQLEALAQNRAVTLLEDHRRVREAARDVGQYSVSACLPVDVIGVYVLLPDAL
165925..166146                     prevent-host-death family protein; Atc_m166                                          N/A                 MPETTFTDLRNHAKTWFDLVESGQTVRVLRNGKPIAEIHPIPAQLPSWKQRPARPLAIGGKEISRLILDERGD
166146..166559                     hypothetical protein; Atc_m167                                                       N/A                 MRVYFDSSAFAKRYIDETGTADVLAWCERASELALSVIAVPELISAFCRLQREGRLTDAQYQIIKRALMLDIADALICDTTPQVIQHAVKALENYTLRGMDAIHLGAAIACTAAVFISADTRQCRAAEAFGLHVVSL
166556..170509                     hypothetical protein; Atc_m168                                                       N/A                 MKHPPHHQIACPTLRLEGGLFLPDQLEKAALGAARFQSEADYRTPKGLKLKDDYSRAFQIASAQWKHFADQFERNDVDADALTRHFVQELLRDAFGYTHIAPVTGLSVGDQHYPVTFLAAALPVVVAPHTLGLDEADPRFAVTGNGARKKTAFQLAQEFLNASPDHIWAMVSNGRQLRLLRDAATLTRPSFLEVDLQDLLDGARYAEFANVWRLLHASRAPQLALPPESGEQEGPCIWEQWRAAGQEEGTRVREGLRQGVTEALLIFGEGFLQHPANEALRQALDTGTLSADTYFQQLLRLIYRLIFLFNVEERGLLHPADDSATAIAARSAYAEGYAVARLRDLCLKRRVRNRFDDHWQALRIVFRGLDHGERRLALPALGGLFAASQCPALDTASLDNAHLLAAMQQLRWSNHSGSLAPVDYRNMGSEELGSVYESLLELVPDIDLPARKFGFIGMGDSEGSTVGNARKLTGSYYTPDALVQELICSALDPVIAQRLSSHPANPVEALLAMRVIDPACGSGHFLLAAARRLAEQLAQLRAPDGAVQPQDYRHALREVIARCIFGVDRNPMAIELARTALWLEGFEEGRPLSFLDHHLQVGDALLGLTDLKALEHGIPKEAFKPLSGDDKAVCKALARANAAGLKQLERDLRSNQGVLRLADSDGLAAINQIEALAQETPAEIAAKEAAYHTFLQQAQNSRLAHAADLLVGAFLLPKVNTTREANNDTPKSLTLFATAPPPAIPTSQTLYLELFTDKPGVLHQAQRAAAHVACVEARVLHWPLAFPQVFAAGGFDCVLGNPPWEVSQMGEEEFFATRAPHIAQLAGDKRKQAIAALPETDPRLWTSYVSESQRIAASNNFYRESGRFALSAVGKLNTYPLFAETMSQLVAPQGRAGFIVPTGIATDDSTKAFFAHITQTARLVSMYDIENRERLFPAVDSRMKFCLLTLGQAEQAEFVFFATRVEQLADARRRFRLTSDEFRLLNPNTLTCPVFRSSKDAELTKKLYRAAPVLIDDNRPDGNPWGIRFSQGLFNMTSDSHLFADAPGTDRLPLYEAKMIHQFDHRWATYTHDDNSRDVTLAEHRDPGFAATPRYWVDASEVEQRLADKAWTRGWLMGWRDITNATNERTVIAAAVPRVGVGNQMPLMLFAERDNPQKYATLLANLSALVFDFVARQKTGGTHMNYFIFKQLPVLSPNHYTEVDLAFIVSRVLELTYTAHDLQAWAHDLGYDGPSYAFDPDRRALLRAELDAYYARLYGLTRDELRYILDPSDVMGDDYPSETFRVLQRNEMHEFGEYRTQRLVLSAWDQLISGALA
170506..170673                     DNA ligase III-like protein; Atc_m169                                                N/A                 MSAIPFTRRESADTCEARAKLVCPDFTQAIDVHWRSRRINWNPLANEAKTPAWTR
170661..171443                     PHAGE_Salmon_7_11: hypothetical protein; Atc_m170; phage(gi345461254)                3e-09               MDSLKIVLLEKTGHDHGFEYVLSANPQAVCLASARHPTSVKITDTANGGYQVYFETTSTTLSGELVRSFPQWVSTNNHFLTSGIAELAILLQRAANLSRALPNQPVRRYENAVRDELAALSPETSRTEVERMVRQRIGQQKFREAMLTYWGGACAVTGLALPDVLRASHAKPWAECESDAERLDVFNGFLLTANLDALFDRFLISFDVQGHLLISSAVAPSDQPLLGISQELRLRWLAPEHHVYLQFHRGCMQKHSGKTI
complement(172384..172632)         hypothetical protein; Atc_m171                                                       N/A                 MSTFYIAPAFSNQAGQCRIVRHDRRIKNPARHHREHQEEWKEAGLMSSQGRLVCLEASAMMAKIFREREPLAAGLVVYEGCP
complement(172642..174405)         PHAGE_Salisa_1: gp43; Atc_m172; phage(gi388570752)                                   1e-08               MDSYQFYRTPPSLARKLCALFETAPTRLLEPSAGAGDLVRAAREQFPRLGKSDIDLYEIDLSRHGQLAECGNLIGLDFLDSLDLSIYSHVLMNPPFRQGVQHVLHAWTKLFSGEIAAILNASGVREPTTRDEERLARIIEQHGRVEYATEAFLSPDTLRKTDVEVALVYLRKEKSVEFWSGSILDALGVDTLAEDQTEFAEREPAAPQGIALSEGQIPAIVRAYRAAWEATKESIIAQHRAARYTGFFEQEMRKILNKDAIATAKSTVGPLHRDLNAAYAEIRRSAWMSVLNTSDFRTYLTRKAQSEVLADFEQVSRMEFSAPNIYGFLQGFALRQDEINAQMVCDLFDQIVYANSENCLFYRWKSNAKHQIGMALQRKRFILSGFSLEGWRSTIDYDAEQKLKEIDRITALVTGQRELEDPLAGLFARHLNELRYGKRLGNRYFDVRWYPGIGTVHFFPKDQKLIDRINAIVGKHRRWMPEHFAAEGDDKTIDQAYKAAESISKAVQKKVDRWTLRQVLYSCGGHRDQEGATQKLQSAFDEAVADGGEENFWTQIARIEARPRPATKPAKASTPEERQRALALALA
complement(174409..174696)         hypothetical protein; Atc_m173                                                       N/A                 MRNKRYQYQLEGTIVFVKAEPKGECRYLVNMQIPGGMARVDIGYLTGAVHAWAAEFFGGRRPAMRAGSAKAACQLLAKWACQQPSIAHYFSRQGS
complement(174874..175506)         hypothetical protein; Atc_m174                                                       N/A                 MIRSTRSLAGLKRMVCLAAMVISAPVAGLRPLRAGRSCTANVPTPGSVILPELGSADSSVDRNAPKARSASALVIFDCSAIAAINSDLFIGSSKISFGPQRMDWGKTFVNKRQQVFGAKTDLKAHEEPKNRKSTPFGMVKWRRSQTSKRSLQNAENAFSVPTLRNGRAGRGRARRGRSFAGSDADSRTHGAGANRLCNRGKACLGRGIWG
175611..175943                     hypothetical protein; Atc_m175                                                       N/A                 MAMTRQEKVAYWTQRVKDQAVSGLSVKRYCAQEEIPVGTLQYWRRKLGVAHSARQRDVVDFFPLHLAPATGAMASSVEIGLLSGRRLSIRGPLEPAWLQTLVQVLESPCG
175934..176281                     PHAGE_Stx2_c_1717: transposase; Atc_m176; phage(gi209447152)                         9e-22               MWLSPGSRIWLAAAPVDMRLGFDGLAAKVQGVLAANPFCGHAFVFRNRRGDRLKLLLWDGLGFWLLYRRLDQGRLHWPRMESGAIELSTAQWAMLVEGRPWTPLPALKVCTPTAL
176331..176876                     PHAGE_Stx2_c_1717: transposase; Atc_m177; phage(gi209447153)                         5e-10               MKSGTPEDLPTHPDALREMVLQLLREQEEKDAEHARQIAEHRQIIAQKDQHLSVRDETIARLEMTIAKLKRWRFGRRSEKLSPDQISLWEEALETEIAAVETELEAVLAESAAVKAPKSAPKSTPRRHPGRMKLPDTLPRVEVRHDPESRTCGQCGGPLETIGEEISEKLIWMPPCVQADF
177050..177063                     attR                                                                                 N/A                 CTATCTGCCTGCGC
complement(177104..178132)         PROPHAGE_Shewan_MR-1: IS110 family transposase; Atc_m178; phage(gi24375433)          6e-53               MDSTIYGLDLAKRVMQLHWVDMGTGEIHRKQLRRRSLLEFFANRGPGIVAMEACGSAHYWARELRKLGHEVRLIAAQFVRPFVKTNKTDAADAAAIWEAVQRPDMRFVAVKSVDQQSVLALHRMREQLVKIRTMQINAIRGLLYEFGADIPQGRQKGEKTIPQVLEQLEDQISKMTLDAMRGQLERLKALDRDIADIEKSLALWEKDQEAVSRLMAIPGVGLLTATAIVATVGDMKAFRSGREFASFLGLVPRQSGTGGRVRLLGISKRGDTYLRSLLTHGARAVVNCQIRNRSPWIDRLLSRRPHNVAVVALANKMARTIWALLAKERTYDPRYQGIMMAA
178397..178837                     PHAGE_Stx2_c_1717: transposase; Atc_m179; phage(gi209447153)                         1e-12               MVAQVLTAKHVDYLPLYRQEAQYLRAGIPISRATLCSWLGQGEYWLSILAEACKMALLEGAILHADKTPLPVLNPGSGKTHKAYLWVYRSRGDAPIPSSSTLMPRTAKASIPKASWETSKGFCKPMIMGATMPSTAKGVSQKPGAE
178845..178858                     attL                                                                                 N/A                 CGTTACCGGCCCCA
complement(178919..179578)         prophage LambdaSa1, reverse transcriptase/maturase family protein; Atc_m180          N/A                 MVSPLLANIYLHHVLDQWFTQVVQGRLKGRSLLVRYADDAVLAFDDFRDGQRVLAVLGKRMGRYALKLHPQKTGFIDFRFKRPRGRHPLATGTSFSFLGFTQVWGRSRQNKPVVQQVTAKDRFARALRAASDWCRANRHRGFREQHQYLSRVIQGHCAYFGITGNDRRIRWFHHQVIRIWMKWLRRRGRQGHLTWPRLRKMLKRYPLPPARIVHQYAVS
complement(179640..180428)         PROPHAGE_Escher_CFT073: transposase/IS protein; Atc_m181; phage(gi26248359)          1e-48               MLDADRLDQLLTRLRLTAIRDQLDHLLDEASRSQMTLREALLFLAEREVARRDSRRIQMGMKLARFPCVRTLEGFDYEAQPSIDPGQIRDLATGRWIGHGQALLLLGPPGVGKTHLAIALGREAVEHGYSVLFTSAAALMAGLTKAHAEGRLEEKLVQLSKPKLLIIDELGYLPLEPAAAHLFFQLVSRRYERASMLITSNRPVGEWGQVFGDAVAATAILDRLLHHSQVITIRGDSYRLRDKRRSGLLQKAAAPTPITSES
complement(180428..181669)         PROPHAGE_Escher_CFT073: transposase; Atc_m182; phage(gi26248360)                     4e-22               MEAKAVGINPVPGVMSGVQEMLEPEAVTTIVRLGQLGWGTKRIAKALGIARNTVRRYLAAGVLDGLDVWLRERFLQHRGNCDVVRQQLSKEWGIDTSLRTVERACRRFRQELEASRRATMRFETAPGEQMQIDFGQTRVLIGGESVRVYLFVATLGYSRRGFVCAFRHERQSAWFAGIEGAFTHFGGRPRTLLIDNAKALVDRHDVHTRHVRLNSRFEAFCRHWDVRVLACAPFRAQTKGKTENGVGYVKKNAIAGHAFESWAQLEAHLARWQREVADVRIHGTTGVAPIERFALERAHLRPIAGMVPFLQLRELVRRVNAEGCIELDTHAYSVPWRLIGETVSVMVSADTVVIEYGGEEVARHAKLSGSHGRSIERRHLLGGLPAAVRIEPLGGDTLLRPLAEYEVLVGGAW
complement(181721..182329)         PHAGE_Vibrio_VHML: ORF37; Atc_m183; phage(gi27311204)                                2e-07               MFSSLHHLIDLEWMHEAYRLTRKDGAVGVDGVTAAQYEEGLEENLRDLLDRIRSGRYVAPPVRRHYLPKSDGTKRPLGIPTLEDKVAQRAVVMLLEPIYETDFLPCSYGFRPGRSAHDALRALRNGFMEQGLRWVIDVDIAKYFDTIDHTHLRCFLDQRVTDGVVRRMIDKWLKAGVLESGILQRPVRGTPQGGVVSGDTVN
182874..182887                     attR                                                                                 N/A                 CGTTACCGGCCCCA
183040..183561                     PHAGE_Stx2_c_1717: transposase; Atc_m184; phage(gi209447153)                         4e-40               MNQGAPSPVAQTALLRIHELYEIEAEIKDDPPEQKMLARQQRAAPLLESFWTWLNDTRAQVAPKSAIAKAIGYALKRWKALTLYLQEGHLGIDNNPVERALRGVAIGRKNFLFAGNDAGGERAAAFYTLIETCKLNGVEPFAYLCDVLEKLPTWPNKRLHELLPWNWKNLTVS