gi|334144765|ref|NC_015583.1|  Novosphingobium sp. PP1Y plasmid Mpl, complete sequence. [asmbl_id: NC_015583].1161602, gc%: 62.32%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
855373..855384                     attL                                                                                 N/A                 CGCGAGATCGGC
855471..855482                     attL                                                                                 N/A                 TCACGAGGTTCC
855599..856387                     phage integrase family protein; PP1Y_Mpl8534                                         N/A                 MSDNHHELIAALKSSLIGQRYSPVVVRNYCAYASGFLDYLGQRGITVADVIDLHVEQYLRHAIVQFEKQRGRGPSARWHEVPRSGIHALLRLVHGQWPPAIKPACEADEVRFSICAEYEIWLREERGLACSSVAALMWEARNFLAWQIDHGLDGLAVLSVTDIDHYMDLRAPKLRRCSLKSVAERLRALLRYLHVTGRVTTDLSGHVLAPTLYAYEGVPSVLDRGQIIAVLESAEKDKSPAGLRDHAILQLLAAYGLRSGVS
complement(856492..856815)         hypothetical protein; PP1Y_Mpl8543                                                   N/A                 MGTASLTVPRFHLTRAAADDLTAIFLEGIEQFGLPQADGYHEGLSAIFAFLADYPHAARLREEISPPVRVHPYKAHLVIYDVGNEGEVIILRVRHGREDWTSSNYDG
857258..857557                     PHAGE_Stx2_c_1717: transposase; PP1Y_Mpl8552; phage(gi209447152)                     5e-28               MILTGARVWIAMGHTDMRKGMQGLALQVQQGLKRDPHGGDLFVFRGRTGSLIKIIWHDGIGISLHSKRLEKGRFVWPSAKDGIVSLTNAQLSCLLEGID
859027..859038                     attR                                                                                 N/A                 TCACGAGGTTCC
complement(859129..861201)         PHAGE_Bacill_phi105: site-specific recombinase for integration and excision; PP1Y_Mpl8569; phage(gi22855025)     5e-11               MTDANLIPAQLLKRKAVVYVRQSTQSQVMANLESQRRQYDLVDVARQHGFTDIEVIDDDLGRSASGTVARPGFDRLVASLCAGKVGAVLCLDASRLARNGRDWHHLLELCGLVEARVIDHDGVYNPCQPNDRLLLGMKGSISEFELGVLRTRMLDAAKSKARRGELRLSVPFGYIWHREAGLDLDPDLRLQEVIRLIFARFRELGSARQVLLSMKADQIHFPRPSDEGRMTSFTWLPIRYRNVIAVLKNPFYAGVYVYGKSEKRTSIVDGRARRSYGHGKPVGTWEVFIKDHHEGYISWEEYERNQKQLALNNYGSAGGVKSGRGGRALLSGIMTCRRCGRRLTVTYTGNPQSRPVYRCDKPNLMMGLPRCMTFGGPRVDAAVARELLRAVEPLAIEAALEAERMHRERQEEQRQILDLELQQARYEARLAERRYAACDPDNRLIAAQLEKNWETALRRIRDLEARQPAENPSTIEVDQGAFANLAENLSAAWNAPDVTMRARQQLLRTLIADIVVDVDDAVRDVVLTIHWRGGQHSELRVRKPKAGEHGCATAEDALEVMRSMAGRWSDEHIAATLNRMGLPTGQGKTWTAHRVYSVRRVRGIDAYRSAVKDGEWLTMTEAAKALGTSSHTVRLLIKTGVLPAVQVVPRAPHQIRSADLMSEAVKSAMARKGRPCRVVDADMLPMFTDT
861904..862542                     plasmid pRiA4b ORF-3 family protein; PP1Y_Mpl8596                                    N/A                 MTARSTDRPTAIDSFLQIATLRIELKDSNPPIWRLVEVPTSVTLKVLHDIVQAAMGWFDYHLWEMRIDGQTYGLPMEDDWGTAPRKIAARVRLRDVLAPGTTTIAYSYDFGDDRQHTLTLSDDRQGDPALAYPRFIDGQRDCPPEDCGGISGFYDMLEIRSDPTHEQHAEINDWLDGYDPGELDTLPIEASLARIAARRNAAAKRIAKPKAT
complement(863101..864486)         PHAGE_Snakeh_retrovirus: gag-pol polyprotein; PP1Y_Mpl8612; phage(gi9628896)         5e-05               MGRRISMATRSELVEAIVERYRSCSRASKQQILDEFVAVTGYHRKHAIRVLGRRETKPPRDRRQAIRYGGDVREALVVLWEASDRLCSKRLKPLIPVLLPALERHDRLDVSAELRDKLLTVSAATMDRLLSEVRIVAGGGRRRRTGMSSAVRRSVPVRTFGDWNDPVPGYVEVDFVAHSGTSSSGSFVQTMVLTDIATGWTECVPVRSRDSSLVVAAIQQAQRLFPFPLLGVDFDNDSAFMNELVVCWCRSQGLEVTRSRAYRKNDQAWVEQKNGAIVRRLVGYGRFVGAEATAALSRLYDVVRLHGNLFQPSFKLREKTRIGARIIKRYHPPTPPAARVLAHPDVAGADKARLSRMLETADPVMLFAGIRAAQDDLGKRVDRRGLNAKPEEPVVVDLQRFAANLETAWQAGETRPTHRRPYRRTKPYPKRPSMLDPFEAQSARGSRRTRRSRQPQCCSGL
864650..865720                     PHAGE_Thermu_26: phage XerD-like integrase; PP1Y_Mpl8629; phage(gi157265417)         2e-11               MAERDASVSDIDLEAFEQHLRTCRCPRATGGRRNHHTVYGARLFRRHLEEIGVCKPAAAAIRLVEPPLVAGFRTWLSKHRGASDATIGLYGRDAVSIMAELETDPMRWSPADIRGYVMKRGRICGRGTIEKMTTSLRAFLRYLAVQGHCRAGLDYAVPAFAHWQLAEMPRYLSGEQVSQMIAACDGDASARRRDRAIVLLLARLGLRAGDVAQLRLTDIEWQAGSLRVTGKSRHEVRLPLPQEVGDAIAAYLEYRPSCCRSDRVFLSTIAPSRPFLNGDGVSSVVRRIMKRAGVMTPVKGAHALRHTAATEMLRHGVPLDKIGLVLRHRGIDTTAHYAKADVTLLKQVAQPWPEAL
865720..866625                     PHAGE_Prochl_P_SSP3: integrase; PP1Y_Mpl8643; phage(gi472343224)                     3e-06               MLETIETYLALRRTTGFAMSNAEHLLKSFGAFAAERGHTHVHTQTAIDWAALGPSIAQRDARLKAVCRFARHIRIEDARHELPPANHFGTRKRRRPPHIYSGTEISRLIEAAGQLRPQGGLRSLTYATLIALLAATGLRISEALKLTFTDITSDGLLIRETKFRKTRLVPLHETAAAGLQGYLERRGPGSGDDPVFADMHGRPLRYIAVKETFDRLVAKVGIRSTSGLRPRLHDLRHTFAVRALQGSPSGRTGCGAHMVALATYMGHVNIYSTYWYLEATADLVRDIAVSGEAFLSEGAQA
866622..867611                     PHAGE_Thermu_26: phage XerD-like integrase; PP1Y_Mpl8657; phage(gi157265417)         4e-11               MTPIAPLIETFMRETLVHQRGASRHTCDSYAQSFQLLFEFAAARLKSKPSRLMLEQIDSGLVSAFLEHLEDKRKNAAVTRNVRLAAIKSFFRFLEYRQPAALDQVRRVLAIPFKKTDTRLVPYLLREELQALLDAPDPTTRDGIRDRAMLHVAVCAGLRVSELTSLKIDDIDISSMSIRVVGKGRRERVLPLWKPAATALRTWLAIRGKVATPEVFISARGEPLSRWGFAYLLKQHAAVAAYHQQGLAKKRVSPHVLRHTCAMIILQATQDIRKVSLWLGHATLTTTEVYTRGDPTEKLEAMEAIVPPHLRRGTFQPTDKLMALLKSTS
complement(867892..868785)         PHAGE_Thermu_26: phage XerD-like integrase; PP1Y_Mpl8674; phage(gi157265417)         4e-15               MPAPATTLRERMIEDMKLHRLCRTTQRNYLRDVERFAIWLGRPPDTATDEDLRRYQIEQSEMGFGAPAMNTAVSALRFFYIRTLDRPDLTRKLHRVKHPRGLPTVLSRDEVGRMLNATTSIKHQAILSVAYGAGLRAGEVSRLKVRDIDSERMLLRVECGKGGRDRNAMLAQDLLVLLREWWKIGRKEGVMHPDGWLFPGMHYLKPISTRQVHRIAAEAAHAAGITKRVGPHTLRHSFATHLLEDGVDVRIIQVLLGHSQLQTTTLYTRVATKTVKAVVSPLDRLGMFPGPQGLPPG
complement(868982..869458)         hypothetical protein; PP1Y_Mpl8686                                                   N/A                 MTRHSPFPDDSLPVIENAIALLGGKQVLGLGSNVPLDLHERLVAGLPLTAVEHLIASVPFLAAHERFHKVSGLRLATYRRHLTMGKETLSSEQSQRIWRFAVAMCQAAATLGDLEVAADWMTAQILPLAWETPLDFMGTEIGGMLVLRVLGQIEAGSF
complement(869455..869862)         hypothetical protein; PP1Y_Mpl8691                                                   N/A                 MTSQRPDLTSRITPRTAPAGLRTFFNIARCWDLSSEQEAAILGAGSRAELERWRELAGKETGSLPLETVLRIGHILVIFRLINTLLGDPARADAWMRKPNSHPLFGGASAIDTLARGRLDDLLALRRYLTIEAGP
complement(869901..871331)         PROPHAGE_Escher_Sakai: putative integrase; PP1Y_Mpl8695; phage(gi15834496)           1e-28               MGWPGRHAREGQPRRHVPPLDEPVAEWAVVTVAEAASRYLTSVPRAGGCAPGKRRQVHKGRDDKTRNQFASAAMLLGKAFPAPIWRLQQDDLDRFAGLLDKLPAHSHHKCERHQNMSLEAIIAEAEALVAAGKLAEDKIGLLPPTSNRHFRFLRTLCTWVRARVPQMADLQWDDYILPDQRDARDQRLAFTPEQGKILFSLPVWTGCEGPGQRERPGRCILHDAAYWVPLLCWYSGGRREEIAKLLVDDIAFEDGIAYFNIDATSTGRIKNARSRRSIPLACELLRLGFLAYVEAVQHAGQSVLFPDLLPGESKQHMGDVFYKRYWRPLARHLPFLKPGQALHAFRHMVSTGLKDAEVYIETRNDLLGHATAHGMSDRYSKATALSKLASIVEKIPIVTGHLEAAPVNICMANWPCAYPGSETQRPGRAEGKPARRQRTGPAASIEAPSPAKRAGQTKRKSARVPITGSTTPAARR
871353..871364                     attR                                                                                 N/A                 CGCGAGATCGGC