gi|326802614|ref|NC_015278.1|  Aerococcus urinae ACS-120-V-Col10a chromosome, complete genome. [asmbl_id: NC_015278].2080974, gc%: 41.88%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
191660..191671                     attL                                                                                 N/A                 ATTGATGAAAAT
complement(196997..197917)         PHAGE_Lister_B025: gp43; HMPREF9243_0194; phage(gi157325260)                         2e-84               MARKRKIVFHEYFKEWFELYKLGAVRDVTLRKYDLTWRHLKHLAPNLTLDQLTKKNYQALLNQFAQSHEKQTTLDFHHLVKGAILEAYDEGLIDRDPTRKVVIKGVKGKIKKAKYLNQEDLHKLLNQLHLQTEISYDWLILLVAKTGLRFSEALGVTPSDFNFSQHMLSINKTWDYKKDEGGFVPTKNASSVRKLRLDWQLTLQFQQLIQNYPQQKPIFVQGRIHNSTVNQRLAKLCQQTGIPEITIHALRHTHASMLLYGGVSIASVAKRLGHANMATTQKTYLHIIQELEDKDNNKMMEILCQL
complement(197983..198987)         type I restriction modification DNA specificity domain protein; HMPREF9243_0195      N/A                 MLSVNKSLSDIDAVGLGRKGTIDNPIYLKAPFWTVDTLFYITTQQQNNIMFFYYLFKTINWKKYNEASGVPSLSKQTIYSISVKVPNTFEQSKISKLFYSLDRIITLEQQKIEKLELLKQYLLQNMFADESGYPRVRFKGYNNKWERSKLNTISDSYSGLSGKTKEDFGKGEARYIEYKNVFDNPVAKLDGTDAIDIDYKQNEVKKGDFLFTTSSETPEEVGMSSLWDYDLNNIYLNSFCFGVRIKEKIDSYYLAYYFRSPEFRSRVMKLAQGISRYNISKNKFCELKISVPSYEEGVRIGRLLKSTTDLIDLEENKLKEFKLIKSKLLQSLFI
199295..202336                     PHAGE_Cronob_vB_CsaM_GAP32: RNA-DNA + DNA-DNA helicase; HMPREF9243_0196; phage(gi414087194)     9e-06               MPKIFTQEQQMEERLIELLTKRESQWTYRSDLKTADDLWENFFQQLEANNTAKLDGVPLTSQEKLSIKSQLDFPSFYVAGEWLSGENGVAQVELHREDASLGACQLMVINGNEIAGGSSHYEVINQFRSEKRDFLDQDGRFDVTLMINGIPLIQIELKNRSEGYKKAFNQIDRYIKTGKYHGIFSMLQMFVVSNGVDTKYIAANSRLNAKFLTGWVDQENQPVTNLEDFTTSALSIPEAHEMIANYSVLDKSSKSVILLRPYQIHAIKAIRQASYQQKGGYVWHTTGSGKTLTSYKVARNLLKIASIDKTIFIVDRRDLDQQTTNAFTSYAEADFVAVDETANVNDLIKRLTSKDRSLVITTIQKLNHVMKRYQQNPDNKRLNKLRDLRLAVVVDECHRAVTPQKQFELEKFFKYSLWYGFTGTPLFAENARDAFGDLARTTEEQYGECLHKYTVQEAMHDQAVLGFQIEYKQTFSDFQLDQLVADQFPKTNLSAIDKKEKEVQLDSAIFDHPDHMEEVVDSIINKSQNKFGFNNGVGKTYDAILTTTSIDKAIAYYKLFKEVKTGQHPRVSISETTKRAVLDFPKVAITFSISDNEHDSQDRKEAMKEILADYNQEFGMNFSLETLNAYNQNLNQRLARKSDTYKVRSEQVDLVIVVDRLLTGFDAPCLSTLFMDRPPMKPHHLIQAFSRTNRLFDDHKKYGQIVTFQTPAIFEEAVKEALLLYSNGGEDQIQAPSYEESKQELDEAVKELRTLVPSVESFNNYTDLAEMKRVAKAFQRFDSIYRTIEVYSDFSEAEFVAQYGFDRKEFEDYTGAYKNLIERIKEEMNDEDELEEDYPIDIEYEIESVRTEQIDYDYLVLLIDRYRESTEEQDKEKFKQEAEKTIDEFGRRKPELSEKIRDIFQAIISSPEKYKNQSTDEILANEINGYKERVLEDYAKAEFLNEELLKYVAANYDEDREGPQIGESEMINTADFEAYKENTQNPKSKLQYRKKIRHGYKDLIKEKIMPYDV
202387..203064                     PHAGE_Brocho_BL3: gp30; HMPREF9243_0197; phage(gi327409422)                          2e-05               MSDKNKNLKKNQFIGEDGKLYESVQVKPWYKKWYVWTIIVLAGLLLLAIVPVDHSNNHPAESSSQAASQDSQGEHPTDSEANKKPISKANEEVILETADGNKASLTIKSASANPDSLPNYMHNSDYFDSSRIVVINFSYKNYDLPKNFVVNTHDLQVYDEEGHALERISKQTGYDEIAPGRSADSQVYFMYADQEHKPQKIQIDYVPMNSTNPSPVATIEVDVEQ
203938..204747                     PHAGE_Lister_B025: Tmp; HMPREF9243_0199; phage(gi157325231)                          6e-05               MSRNWKSFIAVVLVFVALLSGCTSKEERAAIDSFKEVSGKVEKMNTDLDKQIADAEDLVKKNEKALDEQAIGKLETAVSQAKSAKVEVPEQPKKLEELKSETEKLNKADYTSVTQEIADTKKAYEDSVKQLKQVTAPEEKFVIERIQSVEGVTGISAVTEDNDPNKQLGKQGGYTAQVYFSYNLVNQEEVFGNSLIDKGTEAGGSIEVYQTAEDAEKRNTYLGAFDGSPISPGSHRVVGTVIVRVSNQLTASQQKELEEKLIASLTEIK
204787..205227                     hypothetical protein; HMPREF9243_0200                                                N/A                 MLKGADNFRKLEDQLEENGIIENFEKENGPILGRVMIDLGEIPNNLRSEVLKNHTEEEIYVFDCSFDFYDILIGMAIDKDTFEPVSKIWFTEQAENAEHPDEVWIKFFVEMLAENILSVIKAGEGFGIPVCILVNDDSELVAVPSA
205340..205351                     attL                                                                                 N/A                 AAAAGCAGATGG
205510..206712                     hypothetical protein; HMPREF9243_0201                                                N/A                 MNYVKRDKYLGKIAPFVDQPVVKVLTGMRRVGKSTLLQMIQEELLPQVNPQNMISINLESGQYLQIKDGVDFYSYIQKQVKDLTGKLYFFIDEVQLVDSWERVINALRVDYECDIYLTGSNSSLLSSDLSTLLAGRYVSFEIQPFTFSEFIHLYRDLNLDKEELFQQFISLGGMPSLRYFQGEKEASYKYLNDIYNTVVVKDILEYQAIRDVDLFNRILRFCLENIGQTFSANSLRKYFASQGRKVSVDTVLNYLTFCQRAYLLKKVERYDTIGKKILTVDEKYYLTDHGFRQAVGFSNEKAIERVLENIVYIELLSRGYQVQIGRVRDKEIDFIASKQGQISYYQVSYLMESKETRDREFSVYSQIKDNFPKYVLSLDSFDFSQDGVIHKNLIDFLLGE
206984..207763                     hypothetical protein; HMPREF9243_0202                                                N/A                 MYYFLYRTYQQPDYPAASQEYYVSDYSQRLNDFTTQHIMTEGYKLDQFTQAKLAVAVLPTTEKLNRSKYSQTLASQWGMTDEPQNEWALLLFRTDASYPRETSVDNPYMHLEIGGGLKDELTKQEIEEVVEHYDNDIYHNQNNYDQAAFDTFNALARQIYQAHQLEVPESLTQTYEEAAQDPANQSKINSQLMQADLKQAESQTLRNPRPLYRQLANAFFATVGTLLALVVVSVVCFFFAAGFLALAKFISRIFHWDKK
complement(207908..208492)         PHAGE_Staphy_phi2958PVL: probable transcriptional repressor; HMPREF9243_0203; phage(gi209363558)     4e-08               MPTLANRLKSAREAAGLTIEAVSEKIGKSVSTVWRYEQGKSEVNQESLTKLAELYGVSELYLRGFSDMKSADVIEVPVYKKYKKGKLKAAKKKHFFELASMGLPNEEIFAVRINDPSIQSLLSKKDYALVDPLAEVKAGDILCLADKDSGHLKLAKYQVYQDLPLYLPLGDKTEVRDSDDFEVLGRVFAHLGRV
209484..210101                     PHAGE_Deep_s_D6E: replication protein; HMPREF9243_0205; phage(gi423262361)           3e-06               MDLLEKELSLVQDSQLIEATFEAMRDFWLKSSRRVDQAIMQLFVKEIKKRRYVTQGDENDKATESDKESGDEIHNEKSATESSLPEKLQTPAYQDDYEGQVLERITNRYQILFNEAMPEDDQDKLKAYCLLFEGKLLEEALYRAKDAKHPLSYYFKILERWDKDHIYRLSDLAANGEEEKKFKAKSFKKSGYQELEPAWFKSQAK
210234..210674                     hypothetical protein; HMPREF9243_0206                                                N/A                 MKLTNTLHLVEHYNRLYGFDLLDAYDHCVLVLTKFALLNRVQNQEPCQVKLALADAYMACVMMADSYARCANLRPDSWDQLPSLAQAFTSLALDVSVDRDLGPAISDLVAHLWGIGEDLGYDLGQCLIERVAGLLDQEEMDYASMA
210740..211291                     PROPHAGE_Ralsto_GMI1000: ISRSO11-transposase ORFA protein; HMPREF9243_0207; phage(gi17546156)     1e-17               MGVIFMSKYSLEFKLNLVGDYIAKKGSYRTLANKAGIDPSILRRWVNNYYEFGVDGLKKRRTQQVYTVEFKLNAIELYESTEMSYRELANSLNMNNPSLIANWRRAYHERGLDGLSARKGRPPKVSKKKSQINQIKDSSETNQLSEAKIKELEQRITDLEIENKFLKGLRRRVAQRVKREKKK
211291..212181                     PROPHAGE_Lactoc_Il1403: IS1077F transposase; HMPREF9243_0208; phage(gi15674057)      3e-88               MTEITRLHDEKYALKDILSVLKFPKSTYFYWKNKDEEIDKDADLKEEMKDIRETHKDYGYRRMRAELLSRGYKVSKNKVQRLMKIMGIQVTSYTRKTRKYNSYKGTIGEIAPNRINRRFDSTIPYQKITTDTTEFKYYYADDSGNYQTGKLYLDPYMDLFNREIISFKITHQPNGQSMLEGLQAAIEASKLCPYRRTFHSDQGWAYQMKSYTRLLKDHRIFQSMSRKGNCLDNSPMENFFSLLKQEVYYGRTYHSFEELAQAIEDFIIYYNGERIKEKLDFRSPIEFRLHHASFAA
212543..213070                     RNA polymerase sigma factor, sigma-70 family; HMPREF9243_0209                        N/A                 MRLDKLYADRLLREFEALIHRTLADLNIRKCHGDYQDYAQELRLKLLDVVDRFEGDPLAEDRYRFVAYAGRYLRWSLLDLLRQTSRLPQLTLSDHQDWLTESESAEDFEAGAADFLQAAQDTLSERDYQLTLALAEGDFSIADIARTFGVARKTIYQWKDRLAQRLLPFKDLLED
213225..213422                     hypothetical protein; HMPREF9243_0210                                                N/A                 MQEFIDNKLVVKVTNFETDTEIKTTFKDLVEEPALEAVFAVRDAVASLAKDPVTEVESICRHIYV
213453..213689                     hypothetical protein; HMPREF9243_0211                                                N/A                 MQETLNLELLFKTEEGKTKKVTIKEPKEDVSSEVAQAALAAIVGADIFFNEDGLDPYAQATGARYVRRAVQDIYQVQA
213795..214079                     hypothetical protein; HMPREF9243_0212                                                N/A                 MTLIEMGGLASAFVAIITLVSKIIQLITAIQRLITRLDVMAEELNQQKDRQEALHERIQVVEKTLMETAFRFQAVDKQLTTLVERVKEMMAECF
214070..214303                     PHAGE_Lactoc_ul36: putative holin; HMPREF9243_0213; phage(gi21716128)                9e-11               MLLSNQTYDRLKWVALVLMPALAVLVKGLGQAYGFVGTDTVVVTLNLLAIFLGSLLQLSSEDYHKGGGGYGYRPASA
214278..215129                     PHAGE_Strept_SMP: putative lysin; HMPREF9243_0214; phage(gi119953752)                2e-05               MVTAQQVLKTAQKYLGMTMGSTSHRAMVDRYNRVLPRPVGYVAKYSDDWCDIFVTAVGDEAGATDLIGRECGVQRHIHVFAGLGIWLGQVYPQAGDIVCFDWDGGGFADHIGFVEAVTGSTITTIEGNASRRVARNRFAWNDWQIKGYARPKYGRVRKGADKTVDQLAQEVLDRQWGNGADRKQRLESAGYDYQLVQDRVNQLVAQRNLGEGKTESVEVGASVRVADWATHWQTGQKIADWVKGQVFAVMARKPIDHPQSDWAYLLSNRGVAIGWLLSQDVAA
228708..228719                     attR                                                                                 N/A                 AAAAGCAGATGG
229026..229037                     attR                                                                                 N/A                 ATTGATGAAAAT