gi|325169001|ref|NC_015188.1| Acidiphilium multivorum AIU301 plasmid pACMV4, complete sequence. [asmbl_id: NC_015188].40588, gc%: 60.05% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### complement(4487..7453) PROPHAGE_Xantho_33913: Tn5041 transposase; ACMV_P4_00100; phage(gi21231545) 1e-28 MPLRVLLSAEQRARLFSIPTDMASMSRHYVLDAADLAMVRVRRRASNRLGFAVQLCVLRFPGRTLDPSEYPPAPALAFVAEQIGVDPLLFAEYARRAETRREHLVELQKFTGLRSFGLDDWRACLHAGADTAWATDRGEPIIQAMLVHLRESRVLLPSATVLERIGLAARVRARKKTFEVLAAGMADAERSALTELLTVDPELRRSRFAWLRDYSESPAPSNIVSLLDRLEYVRAMGIDPARAGRIHAARLVRLTDEGALMTVQHIADLEPARRTAILIAQIASLETRLTDATLAMFEKYVGTLFSRARNRDERRFQATRRDVAKALLLFRRTIAALRQAKEAGEDGITAIEREIGMNQLEDVLPIIGAVADVADQDILVTAAERYTVLRRFSPRFLAAFDFRSNMPNDPVLAAIELLRALNRGAIRSLPKRPPSTFLPPQWRKLIFAGGTADRRLYETAVLAVLRDKLRGSNIWVAGSRDYQAFETYLLPAGAGAATGIDGEADPDRYVASRAEMLRERLTFVAARAAQGDLDGVEIEDGKLFIARTPPTVPDAARDLALRLNSMLPRVRITEVLSEVDAWTGFTDRFVHLRTGNPVTDKAALLAAVLADGTNLGLARMADASRGLSYHHLVNVAQWHISDDNYVAARAAIINAHHAHPMAAIWDDGTSSSSDGQYFRAAGRAGAGGSVNAKYGIEPGAVIYTHVSGQYGPFHTRVISATMSEAPYVLDGLLHHVHQTDLRIAEHYTDTAGATDHVFGLCHLLGYRFAPRIKDLRDRKLYTIEKPGTWPLLVPLIGDAVETTAILGQWPELMRLKASINAGTVLPSVILRKLAAAGGGNTLSRALRAVGRIERTLFTLQWLSDPALRQRSHAGLNKGEASNALRRAVFFHRQGEIRDRTFENQSFRASGLSLITAAIVHWNTIYLDQAVQHLRAQGTAVPDDLLAHVAPLGWEHIALTGDYVWNPANPNASFRPLRDVRAPFIPRAA 7627..8208 PHAGE_Entero_P1: Cin; ACMV_P4_00110; phage(gi46401653) 1e-26 MAHTLIGYARCSTDRQDLAAQRAELEQLGVKPDRIYTDHGLTGTNRARPGLAQALAAVRKGDTLVVPKLDRLARSVPDARAIADELITRGVKLALGAAVYDPTDPMGKMFFNILATFAEFEADLIRLRTREGMAIARAKGKLRGKRPTLSERQQKELRRMYDTGNYSITDLADLFSVSRPTIYRTLARQPANA complement(8205..10997) PROPHAGE_Xantho_33913: Tn5041 transposase; ACMV_P4_00120; phage(gi21231545) 6e-25 MGHRRILTGEQIAQLFDPPTDRRGMIRHYTLSAADLAVIRRGRGDHHRLGLALMLCYLRYPGRPLHAGETPDPALVAFVAAQVDVLPEYLGAYLGVDQNRRRHSAALQDRLGLRPWGPRVAADLADWLLAHALETDRLVDLAALVLDECRGRGILLPPPARLERLCIEVRYRARREIERRLTEGLSADQRHGLDTLTERRLDTSQSWLAWLRQIPESAKPASMLGLIERLEHIRAIGIDPERGYRINQARLAQLVREAGRTTVQHVAGYERRRRHAVLTAIALDLSARLTDQAINLFERLIGAMFRKAEGRHARAFQAEGRAINEKVRLYARIGAALMAARAGQGDPFAAIDKVIPWERFCSTVVEAETLVRSEDFDPYEVLSDHYAGIRRWAPAFLAAFEFQGVPAAASLMRAIAMLRAMNSAGASTLPKSAPTAFVRPRWARHVLTARGIDRRYYELCVLAELRQRLAAGDVWVTGSRQYRAFEERLISRETLQVLQKESGIPVAVETDFERFIATRRTWLDARLAEVDARARGGLLPDVTIEKGVLRITPIEKSTPPEAETLAAKLYATLPRIRITDLLTEVAGWTGFPDCFTHLRTGETAADPRVLMAGLLADGLNLGLTRMAEACSIASLGQLAWTADWHIRDETYALALRRLVEHQNREPLAALFGSGTASSSDGQFFRAGGSGRDASRINAHYGPEPDLKFYTHLSDRYAPFHTRVIAATASEAVHVLDGLLDHHGEAPPRQHRHHTDGGGVSDHVFALCALLGYVFAPRIPDLKDRRLYSFARPAAYPTLAPMIAGRINVDLIRAHWPDLLRIATSIRTGTVSASVILRQLAAYPRQNAVAAALRELGRLERTLFTLDWLEDPGLRRESSHELNKGEARNSLARAVFIHRLGEIRDRTFENQKHRASGLNLGSPHDLFKIVR complement(10948..11595) PHAGE_Escher_D108: G region invertase; ACMV_P4_00130; phage(gi281199698) 1e-42 MLIGYMRVSTDNDRQVLDLQRDALLGAGVDERHLFEDRAGGSRRDRPGLAAALAYLKSDDCLVVWKLDRLGRSLPHLLETVNSLRTRGVGFRSLTEQMDTTTPQGEFLFHVFGALAQFERSLIQERVQAGLAAARRRGRRGGRPVAIDAEKLAAVITALDTGATKSSACRTFGISRSTLVDSLARIGWSPGLNKQEGGTSGSSTDIDRGTDRAAV complement(11845..12183) hypothetical protein; ACMV_P4_00140 N/A MVMGGTPAVRGNQIEYKRYYNNLSFVNATLLFWLWRGVKEPPGGRSGAQPVGEHRTGEDGRRSRSLTPWSGPEPIGWGAQPSGLRPCPPAPLPFGENGVQGQRLCVGQIGLK 12176..12430 prevent-host-death family protein; ACMV_P4_00150 N/A MTITTLSSREFNQDTSRAKKAASEGPVFITDRGKPAHVLLSIEEYHRITGKRRSIADALAMPGLTDIEFDPPRVSIGLRPADFS 12430..12855 hypothetical protein; ACMV_P4_00160 N/A MFILDTNVVSELRKVRLGKAHPQVAIWADSVDAETLYISAITILEIEIGILQIERKDPDQGDLLRAWLEKQVLPEFEGRIFPVDTAVARRCATLHVPDPHAERDALIAATALAHGMTIVTRNVADFHTTGVPLLNPWEPEH complement(12928..13236) mobilization protein; ACMV_P4_00170 N/A MARKPIEQQIAQLEARAKTLKARLAKQDRARDTRRKILIGALVLDRLEHNADAEFSERLANWLRRELPGFLTREDDKALFADLLNGKADAPATIPEPRKAEA 13654..16497 PHAGE_Pseudo_MP1412: putative exonuclease; ACMV_P4_00180; phage(gi399528968) 3e-06 MAIYHLSMKPVARGSGRSAVAAAAYRAADRLENARDGMVHDFSRRHGVEHAEIILPNDTVAADGTVVHGVGPEWARDRSALWNAAELAERRKDARVAREIEVALPHELSAEQRLALTRDFAQALARQYGVAVDFAIHAPHGHTDVRNHHAHILLTTRRMMIGRGEAGRWIGAMPAGFLGEKSELELENKKLQALGLPTSHEQLRDIRSGWEQRTNEHLVRAGLDVRIDHRSHQERGLEIEPTQHMGVNATQMERRGKVVSRVRIDEDAAKRNAALIRERPDQVLTLITGEKSVFDRHDVARALHRYIGDADAFQAAFATVMASPALVELRAEQRDERGRVIEQARYSTREMVGIERDMAISADRMAQGRGFGVAGRRVEAAIETRPFLADEQRAAIEHVCGPERISAVVGLAGAGKSTMLAAAREAWVAQGYRVHGAALAGKAAEGLEESAGIASRTLASWERGWERGFDRLGPRDVLVIDEAGMVGSKQLSRFITEADRAGAKIVLVGDPEQLQPIGPGAAFRAVAERVGFVDLAEIRRQREVWQRAASVAFGRHQTEEGLRAYAERDAVRFEATAADARAAIVRDVLADMEARPDGSRLVLAHRNADVRDLNEAIRTVRRERGALTDERVYRTTEGERAFAPGDRLLFRENNRELGVKNGMLGTVELAEDDRLLVWLDSPSGPGRGRSVSVSMADYAAVDHGYATTIHKAQGATVDRAYVLASGTMDRHLTYVAMTRHRDGVTLYADREEFSTVAALSARLSRSQAKETTLDYDRADYAHRRGLDVRPREAVVAHEIAAGRAGFRERYEAHRQQQAAEAARNKGAHGLVREWARRSEAYNKALPGLAADPTLVGGARAELLGFEQLLDRHSEAAQWLRARGHDFGVKDGSALAQVLASPDAGRAIGRLIEGAEERMRGQLAREAERVAARKQQERSVSRDRGMSM 16494..17099 hypothetical protein; ACMV_P4_00190 N/A MSSAEEHLYGLMEIAEQQQAAVQRALNGLAEERAALAQERQKLAEEASSLEERVREAVSAAVTTALEQVGKEGVATVRAATKPMLEDLAGLAGGMAVAEEALRRIVAWASWRLLGWIVALTVGLMLFGWLSSTAVVWWDRTTVSQLRGEIAMLQANHAAWVKAGMLDKITRCGANSRPCVAINQSAGAYGNSGEYRVLKGY 17273..18154 O-antigen ABC transporter permease protein; ACMV_P4_00200 N/A MTELSEPGSTIREFRQPVHFSLSADRGWGQRFQLIATDMKDGVRLWRLIWTLGLSDIKLRYRGSALGPFWLTISMGVQIGAMAFLYADLFHTDIHTYLPYLSISIVLWGYLNSLISDGCVCFSSADTLIKGTRMPFTVHAARSVVRNTIVLGHNLVVVVVVFAIMGVDQSLYSLLAIPAFLLWLIDAFAISLLFGAFCARFRDVPQIIMALMQIAFFVTPIMWYAKILETHPRAVLLVKLNPFFYILEILRAPLLGSPMSVDMVLKALIISAGIIIISIIGFARTRGRIAYWV 18159..18986 PHAGE_Amsact_: putative ATP-binding cassette transporter; ACMV_P4_00210; phage(gi9964444) 1e-10 MAHLTAFNISVDFPLYHSDSRSLKKTIMGRAASRFGQDQKHRPVVQALRNISFSLRSGDRLGLIGSNGSGKTTLLRALSGIYQPTVGSLSMEGRLTSLLDPGQGMNTDLTGRENIQLRGQFLGLPRAEIDRLEADVEDFSELAQFLDLPVRSYSSGMVVRLAFAMATAFPPELLLMDEWILAGDAAFMEKAKNRIEGMVRHADILILASHSPVILAEWCNRLVLLDNGQIKADGEPMDILEEYLPSTAIEEVRLTVSQKRMRKQRVVEEESKDLP 18983..20041 PHAGE_Escher_phAPEC8: putative dTDP-glucose 4,6-dehydratase; ACMV_P4_00220; phage(gi448260373) 2e-91 MTKFLITGGCGFIGSAVVRRLLASAAHEVVTVDKMTYAASEDALGAALGHPRHRLIRADIADAAAMRAVFEAHRPDIVMHLAAESHVDRSIDGPRDFIDTNITGTFVLLEAARAWFATLDEPARRRFRFHHISTDEVFGALEPGDPPFTETTPYDPRSPYAASKAASDHLVRAWQHTYGLPTIVSNTTNNYGPWQFPEKLIPLVLINALEGRPLPVYGDGSNLRDWLFVEDHAEALVTIALTGTPGETYAIGARQPRSNLDVVRAICRLLDDRRPDPAGPRERLITFVADRPGHDFRYEIDPARSEAALGWRAAHDFEAGLARTVDWYLANETWWRAIRARRYAGQRLGTAA 20038..20919 PHAGE_Escher_phAPEC8: putative glucose-1-phosphate thymidylyltransferase; ACMV_P4_00230; phage(gi448260372) 2e-82 MIRKGIILAGGSGTRLHPSTLAASKQLLPVYDKPMVYYPLSTLLLAGIRDLLLISTPQDLPQFRRLLGDGGQYGIHIDYAAQPSPDGLAQAFLIGEDWLAGEACALALGDNLIHADHLSLALRQAAGREAGATVFAYQVRDPERYGVVTFDDAGRPIDIVEKPTAPASSWAVTGLYFYDRRVSEFAHRIRPSARGELEITDLNRLYLDDGSLTVERLGRGTAWLDAGTPDSLLQAATFVQTIQARQGQLVGCPEEVAFRMGFIDAETLRRHATRLGKTDLGRLLHELADGDTP 20916..21470 PHAGE_Escher_phAPEC8: putative dTDP-4-dehydrorhamnose 3,5-epimerase; ACMV_P4_00240; phage(gi448260371) 6e-30 MIETLVLPDVKLITPPRFADSRGWFSETWNQAKLAALGFTETFVQDNHSCSTRPGTIRGLHCQIAPFAQGKLVRCIRGAIWDVAVDIRHGSPGFGRFAAAELSAANGAQLWIPPGFLHGFCTLEPDTEVVYKVTAPYDKASERGVIWNDPDLALPWPVPGDGALLSDKDNLLPRLAEAEPWFTL 21472..22377 PHAGE_Salmon_1: putative bacteriophage tail fiber protein; Lambda gpN homolog; ACMV_P4_00250; phage(gi169257204) 4e-05 MPARPILITGASGQLGHALAARAPAAGLPARAVGRPGFDFDAPETIAATLAATDPALVVNAAAWTAVDAAEANADAAYRANRDGPATLATLCRARGNPLIHVSTDYVFDGTKGAPYTEADPIAPLGVYGESKAAGEEAVLASGADAIILRTAWVFSATGKNFARTMIAAAHRLPTLRVVADQRGAPTAAEDLAEAILAIAARILAEGWQPGFAGIFHATSAGDTSWHGFATEILALAARHGTPLPDIVPIATADWPTPARRPADSRLDTTKLKDSFGLALPHWRDATARIVPAILAQDETS 22374..22586 glycosyltransferase; ACMV_P4_00260 N/A MTTILLSTFNGTRFLPEQLASFAAQTDQDWRLLWRNDGSSDSTHEITSRLVAGIFHATHTGDITWDGYAT complement(22841..23857) PROPHAGE_Xantho_33913: IS1595 transposase; ACMV_P4_00270; phage(gi21231554) 1e-26 MDVLAREDLPFPQSLPEFQRIFPNDAACAAYLESARWNGGFACPRCGVVGEPFRFEARPGVLRCRACRKDVSLMAGTVMERSHTPLSTWFWAAYLIASQTPGMSAVQFQRQLGLSRYETAFGILHKLRAGMVRPERDKIGDTPQEHVEVDETWVGGRTRGDGRGVHHKVLVACAVEVRHRKPGTKLDNRKDGRYAGRVRLAVVPDRSANSLCGFVENAVAPGSLIVTDDWSGYAGLGRRGFDHHAIAECGDPEVAEEFLPIVHLVFTNLKTWINGIHHGVSAKHLQAYLNEFTFRFNRRLYPFNAFRSLLGIAGRAAAPTFDELYSGEWTHPTFSGCG 24365..26617 PHAGE_Pseudo_PAJU2: hypothetical protein PAJU2_gp49; ACMV_P4_00280; phage(gi209552468) 7e-05 MKYPNFEFMHEHGLGVLAFGSEVPEVVLKLCNLSSPSDIAVIRNRFAFSGRSCILEAMHVQAQRDISAAELRVTRTESERRHLEERFAAAELRVTRTEAERRHLEERLAAAELRVTRTESERRHLEERLAAFESHMTRMETERRDLAEKLGSVLSSESWRMTAPLRFLVRLIRRLTGRNLRRGRIILRALKPANIEHRREVIQVLRRRVVLASRFVPGLNNAVIHASRITLPSISDDSNLKSLKYIPPHHAAVVSYPIWSLRFDTPSATDLLHLEETEIKMPEILVIARFSSETFHLIQQTANALKATVGVRWRSVFITKNPDDTTFAVTCMQAFRGDVRFLTRSFPEELNGKIIVLLEAGAIPRSHGLRLLVEAMVHNPDLALTYSDEDRLSSKGLPEFPWFKPKYSPLLAAQGMLFGRMFAIRPCGQLASDSLFDPIQSVLQLALKATHGLASERIRHIAHVLFHDILPSAPFQPVSLPSLEILPFVSIFIPTRDHWHLLRQCLDSLRRTDWPIDRIEIIVIDNGSTETETLEGMAIEEASGRIRIIRDSRKFNYAALNNVAARAARGDVFVLLNNDTEIIDPTWLRKLCAYAIQPDVGAVGAKLLYEDRTIQHGGVILGIQGTAGHAHLLLRESEGGYQQLANITREVAAVTGACIAVSRTAFEEVGGLREEFEVAFNDVVFCLDLLAAGRRNIYVHDCVLIHHESKTRGFDTTPQKIAVARSEAIRAWLHHPRLLVVCELSDVVVR complement(26594..27961) PROPHAGE_Xantho_33913: IS1478 transposase; ACMV_P4_00290; phage(gi77747808) 6e-89 MPPKLNASQDDLELFRSRLENIIDQRHPLVRLARLIDWRVFEERFGSLYAEAAGRPALPTRLMVALHLLKHMDGLSDEAICARYLDSPYVQAFCGETHFQHTLPLDRSSMTRWRKRIGPERMEALLAETLAAAERGGAVAEKHYKRVTIDTTVQPKAVTHPTDSKLLHSGIETLARMARKHGITLRQSYRRVARYARQEAARLHHGGKRREAEARVRKLRTWLGRLARDITRKIAGNAEAKATFAETLGLINRLLRQKRSDRGADKLYSLHAPEVECIGKGKARTRFEFGVKVSIATTNAAAPGGQFVLGMQSQPGNPYDGHTLAGQIEQVERITGVAVARAYVDRGYRGHGVEAEGRRIFISRQKRGITPTIRRELRRRTAIEPVIGHMKTDGHLGRNFLLGFDGDAINAILAGAGHNLRLLRRWLIRLLCAIFTWLSAARPSPDLRLPNYHIA 28152..29351 PHAGE_Sulfol_STSV2: glycosyltransferase group I; ACMV_P4_00300; phage(gi448260208) 2e-07 MLRDDPYYSPNLSLESPYKLAFAPRRRELWRKTVGTTLKILMLSSTYARGHGVAVVIDLMVTTLRKRGHVVFLAGTKSDRDFSYGGTEVIDVQDPRSAATMATDLQIDVIIAHTPPFFGVARWTGAYPPVIAYDYGEPPPNFFPDEEARRESLADKNASLRMCTKVFAISQAIADESLIPPDKVIPLGNSHLGVWTSELLERREAIRRKHGWTSHYVILNVCRFHVGERKYKGVDQYADMLAALKSVDPDFAARCIFVLCGKAHDEDIAAVRAQGITAIANISDEEMLDLYVAADLYVNFSRWEGYNLGIGQALAMGLKVIASDIPAHRAFGVRVVGNAIDAAFALLDLTRESTERVPLLWSWDEPLHLFAEEIESLAFTSTNPQIGWSHDKSEDQGVA 29466..30044 PHAGE_Ralsto_RSM3: hypothetical protein RSM3_gp14; ACMV_P4_00310; phage(gi209901327) 1e-32 MNESATGPLIGYARVSTQGQDLAQQRATLREAGCTRIFEEKVSGAKRDRPELARLLDHLRAGDVVTVTRLDRLARSTRDLLDIAERIKEAGAGLRSLAEPWADTTTPAGRMVLTVFAGMADFERSLIVERTSTGRIAAKARGVRFGPRPALAAEQIAHARQLIEVDGKPVAEVARLLGVHRATLYRTLEKHQ 30339..30662 hypothetical protein; ACMV_P4_00320 N/A MQLAWEICYMPSEKGKLLVMLDLPIPNDATKLWLRSSWSRFNRTDGCEITLNWTKVGFRWRAMVPNFHYNKRSGWIILKDENGIVDFKKYSHAMRLVELYISENEKK 30875..31891 PROPHAGE_Xantho_33913: IS1595 transposase; ACMV_P4_00330; phage(gi21231554) 1e-26 MDVLAREDLPFPQSLPEFQRIFPNDAACAAYLESARWNGGFACPRCGVVGEPFRFEARPGVLRCRACRKDVSLMAGTVMERSHTPLSTWFWAAYLIASQTPGMSAVQFQRQLGLSRYETAFGILHKLRAGMVRPERDKIGDTPQEHVEVDETWVGGRTRGDGRGVHHKVLVACAVEVRHRKPGTKLDNRKDGRYAGRVRLAVVPDRSANSLCGFVENAVAPGSLIVTDDWSGYAGLGRRGFDHHAIAECGDPEVAEEFLPIVHLVFTNLKTWINGIHHGVSAKHLQAYLNEFTFRFNRRLYPFNAFRSLLGIAGRAAAPTFDELYSGEWTHPTFSGCG