gi|320101555|ref|NC_014962.1|  Isosphaera pallida ATCC 43644 chromosome, complete genome. [asmbl_id: NC_014962].5472964, gc%: 62.44%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(3540758..3542254)       PHAGE_Synech_S_CBS1: lambda-like phage portal protein; Isop_2435; phage(gi356870797)     7e-30               MLNWLTNLFAQRSRRAPRRAVRAIRARYDAAVTNDDNRRHWANADGLSANAANSAEVRRVLRNRARYEVANNSYARGIVLTLANDVIGTGPRLQMLTDDAEANRRIEQAFAAWAKAVSLADKLRTMRMARAHDGEAFAVLTSNPKLPTPVQLDLRLLEADQVCTPDLAATGANAIDGIVFDAAGNPVEYHVLKEHPGETSRRTFLDYDRVPAASVIHWFRADRPGQARGVPDITPALPLFAQLRRFTLAVLAAAETAADFAGILYTDAPAGGEAEAAEPFEPIELEQRALVTMPGGWKMSQLQAEQPATTYAEFKKEILNEIARCLNMPFNVAAGNSSGYNYASGRLDHQTYFKAIRVEQAHLECVVLDRVLAAWFDEAALIPDLLPAGLGLIADWPHQWFWDGHEHVDPTKEASAQATRLGNHTTTLAHEYAKQGRDWEEALRQRAKELALMQELGLTTPAAQPTPADEEQPDDEQGPDGEEEPTDDDEAELEEQAA
complement(3542257..3542454)       hypothetical protein; Isop_2436                                                      N/A                 MADDLEDKIRENAQGPSKASGDAGSVEQHPLPDQIEADRYLTSKEAVKSKKRGLRFNKLVPPGTE
3542781..3543110                   hypothetical protein; Isop_2437                                                      N/A                 MQTPSSKSSLSPARQRLVELMQDLNFGHIERLEILDSQPVFDPPPRVVREIKFGARNGPRPEAALRDFVLKAQLVEFFACLDTLGDGVIERLEVQHGLPFRVALEEAAA
3543307..3543882                   sigma-70 familyRNA polymerase sigma factor; Isop_2438                                N/A                 MQELFDDLAMKLIKERVKQMIGRNGFTPSDREDLKQEFALHLLECLRRLKEPPQDRQAFLRRVISRFAISLIRRREAQKRDHRRVSSLSKRVVDCDGQRVEMARTIPEDHTHTRLGIAPRSRLEDVELGHDVATVLAMLPPDLRDLCERLKDHSIAEVARQVGVPRTTLHDAISRLRQHFEDAGLRAYLSR
3543946..3544797                   PHAGE_Synech_S_CBS1: exonuclease VIII; Isop_2439; phage(gi356870827)                 4e-16               MMLASPWARRNGCSGAPALGRLDFLLREPAEVYHAKSKEYLTSHALADFRENPLLYRKRQLGLVVEEDRPAFQIGRAAHTLILEGRDAYRRQYAFGGPTNPATGKLFDSRSKAYQEWAERQAKPVLTDRQAALVEELAGAVQRHPVAGELLAEGLPESVLRCDYRGVPCQARLDWLNPAKGLVDLKTCDHLKYLEADARSFGYLHQLAFYRALLALAGGEQVPVYLIAVEKREPFRCGVWRIDPNVLAACERDNEAALERLVRCRQLDHWPTGYEELRVFDHI
3544813..3545583                   PHAGE_Rhizob_3: p077; Isop_2440; phage(gi195546607)                                  3e-39               MSLLAQVQSGKRPAPRRVLLYGTHGIGKSTFGAQSDRPVFVQTEDGLGEIDCDKFPLALSYADALKALEALYTEPHPYRTVVVDSLDWLERLIWAEVCRQRSVENIEDIGYGKGYAFALTPWREFLTGLDALRNDRGMTVVLIAHSRIERFENPETDSYDRYVPRLHKLASQVIQEWCDEVLFATYKVYTKQTDEGFSRKKTKGIGTGERVLYTSERPSHVAKNRLGLPDELPLDWHAYASFFHQPHTTQNGGTNG
3545576..3546031                   PHAGE_Pseudo_73: hypothetical protein ORF031; Isop_2441; phage(gi148912859)          1e-22               MADLHGFNANEVDPTTDLEPIPAGKYLAMITDSEMKPTKSGDGRYLQLTFQILEGPYKNRFVWARLNLHNANETAVKIARAELSAICRAVGVLTPRDSCELHNLPLVITVKLKKREDTGELQNEVRGYAKKEAASGQPQQAATNAPPWRRG
3546149..3546598                   PHAGE_Entero_mEp390: holliday-junction resolvase RusA; Isop_2442; phage(gi428782708)     1e-19               MLTLELPFPPSLNHYYRHLGHVTLISRRGRAYREAVMALLAAQKIEPMSGPLDLAVELFPPDRRKRDADNFHKCLSDALQHAGVFHDDSQVVRLEISKHEPVKGGKVVVRIQERSTDGRLEDLKSARRYLSRVIEQIEGAVGATPTLPT
3546573..3548318                   PHAGE_Pseudo_vB_Pae_Kakheti25: DEAD box helicase; Isop_2443; phage(gi388542689)      4e-83               MQLRPYQREAVEAVYAYLRTHDDNPVVVIPTAGGKTPVMATICKDAVTRWNGRVLILAHVKELLEQAADKLRQVCPEVHFGVYSAGLKRRDTGRAVILAGIQSVYQRAVELGTFDLVLVDEAHLIPPEGDGMYRQFLADAKGINPHLRVVGLTATPYRLKSGLICSPDHFLNAICFEVGVRELIVQGYLCPLVTKAGRARADTSGLHVRGGEYVAVEVEDLMDQDALVRAACAEIVEYTRDRQTVLIFASGIKHGQHVVHVLKEQHGIECGFVSGETPDGERDRLIARFRDQEWARQLQIDFGANAAEPLKYLCNVNVLTTGFDAPNVDCVALLRPTLSPGLYYQMVGRGFRLHPGKQNCLVLDFGGNVLRHGPVDQVRVKEVGGQGSGQAPAKECPQCQSVIAAGYARCPDCGYEFPPPERGKHDAKASSAGILSGQVTTTRYIVQDVFYSVHQKRGAPEDAPRTMRVDYKVGWHEYKSEWVCFEHTGYARQKAVAWWKQRSQEPVPETAEEAVALAQHGRLAPTREITVRSVTGEDFDRIIGYELGDIPPQPDGKDLPEDALDFPFGANAVAAEEEIPW
3548315..3550204                   PHAGE_Bacill_BCJA1c: hypothetical protein BCBBV1cgp22; Isop_2444; phage(gi56694890)     6e-21               MTPGELLTAALRYAELGYRVFPCAPGNSTPLTDHGFLDATTEVEQIERWWGQHPTANVAIATAGLLVVDLDPAEGNAANPWLKDDPDKRLDLAAAPTAMTPRGGRHHVFRKPAGKGWRCTASRLAPKVDTRTDGGYIIVPPSWRPDGAYSWVPGLELDGPPDRLPEPPPWLVALLDSLAQETPTLAHVAAGGGQANPIPEGQRNATLARLGGNMRRVGMTLAEIAAALLQTNKDRCFPPLSPREVERIAASVARYEPDQIATAMAEGHWDQLMQVQAPQLAPVSLADLTARYPDLRRPVIHGLLRQGETMNVISAPKIGKSWLVTDLALAVATGRPWLDTFACEAGDVLIIDNELHGETSANRIPKVAAARQIGLGDVGGHVFVQNLRGHWQDIFSLGPYFRALEPGRFRVIILDAMYRFMPREMDENDNGTMANVYNAIDRYADLLGCCFVLIHHTSKGNQSGKAITDVGAGAGSQSRATDTHLVLRPHEEDDVVVLEAAVRSWPPVLPRCLRWAFPVWTPADDLDPTLLRSERPRRARRAEADADEAEQPEPSWDAERFAAAFVTGTPKTRDAILAEANAAGLSDWKAERLLRRAEGLGLVHRWASGRNRPSAYANVPQPASEDADQ
3550504..3551844                   PHAGE_Strept_1: transferase; Isop_2445; phage(gi39653711)                            9e-77               MKIELRKLSEIKPYPNNPRLNDDAVEAVAASIREFGFRQPIVVDAEGVIVVGHTRYKAALKLGLEMVPVHVATDLTPEQIKAYRIADNKSAELSDWDYDLLPVELGELQGMNYDLGLLGFDQDELARLLDPGVKDGLTDPDEVPAPPDEATTRPGDLWLLGDHRLLCGDSGKPEDVDRLLNGAVIHLVNTDPPYNVRVEPRSNNAIAAGLSSFEVTHHQKMDVVRHPEKAKPTGKKLRAKDRPLANDFVSDEVFEKMLHAWFGNLARVLESGRAFYIWGGYANCANYPPVLKATGLYFSQAIIWVKEHPVLTRKDFMGNHEWCFYGWREGAAHVFLGPNNAVDVWSVKKVNPQSMIHLTEKPVELAVRAIQYSSRPGENVLDLFGGSGSTLIGAEQTGRKAYLMELDPLYCDVICERWCKFTGKEAFRVDPQGNQTPRSELLAGRA
3551786..3552265                   PHAGE_Staphy_JD007: hypothetical protein; Isop_2446; phage(gi428783197)              1e-06               MLILKEIKPRAPSCSPGERKVGGNRRPRSWTICPVCLGIFPLPHLRRRFCSYPCKVTAQATGRQTVRRTIAKARTAQSLLRYHVQAGNIVRPDACEECGATDRRIEAAHFNYDEPLRVRWLCVPCHRRWDKSEPKHATVIIQRREKFTGRKAERGNGHA
3552258..3552647                   PHAGE_Propio_P105: hypothetical protein; Isop_2447; phage(gi410491811)               1e-09               MRDYSLHDSGERQQFATGAVRDRQAGKGRFDLLPPLAMNRLARHFEKGAAKYGDRNWERGIPLSRFLDSALRHLFAYLAGRDDEDHLVAAAWNLLAALETDARAAGGRLPPELVDIGPQRPDGTKEAEA
3552644..3553087                   PHAGE_Caulob_phiCbK: DUF1937 protein; Isop_2448; phage(gi414087968)                  2e-08               MIYLASPYSHPDPAVREQRFRAACRAAVALLCAGQVVFSPITHSHPLAQHGLPGSWQFWEQYDRKFLERCDEVVVLMLDGWEESVGVQAEIRIARELGKPVRYLAPELAPVSPTLAHVASGSPEADPTPIGADRPPTLAHVASEVPG
complement(3553157..3553336)       hypothetical protein; Isop_2449                                                      N/A                 MTTNNHPIEPDGYDRVAPGFACPSCGEDDIDSLVWIDDDKVRCDSCGTVYDPNQPDAEA
complement(3553351..3553686)       restriction endonuclease; Isop_2450                                                  N/A                 MAKKKTPKTEAPADAGKKAPKAKPAKAKPEAEAKPKKVGCLDAAAKVLGETGQAMTCQEMIDAMAAKGYWTSPNGKMPAATLYAAILREITTKAKESRFTKTERGKFALAK
3553827..3554051                   hypothetical protein; Isop_2451                                                      N/A                 MMAEDREHSPTGGLNPNALSVADAARLLTRIGGRPVTAEMLQADIGAGAPTNADGTINLVHYAAWLLKETGRGD
3554041..3556308                   PHAGE_Pseudo_D3112: hypothetical protein D3112p26; Isop_2452; phage(gi38229138)      1e-24               MAIDPRKLRPSELCRLLNSTPLGEVINERQLHRHRSRAGLRIGDARHMDLLRYVAWLVQLRHAPRPEPDGDPYEKLKGRARARNIALSLAGRDIGELPAVVNPGRKAQAESNFRFFCESYFPLTFHLPWSKDHLKVIARIEQAVLRGGLFALAMPRGSGKSTICECACIWAVLYGHREFVCLIGSDEGHAMDMLDSIKMELDGNDLLLEDFPEVVYPIQCLDGIANRCKGQLYKGERTHIGWTAREIVLPTVPESKASGAIIKVAGITGRIRGMKYKRADGKTVRPSLVVLDDPQTDESARSLSQCATRESILAGAVLGLAGPGKKISGIMPCTVIRPGDMADNILDRDKHPEWNGERTKMVYSFPANEKLWQQYAELRAESMRQGNAGEEATEFYRQNREAMDAGAVVAWPERFNHDELSAVQHAMNLKLQDEAAFFAEYQNEPLPEEVAGDDELTADQIAGKLNRMKRGEVPIGCNHLTTFIDVQANLLFYVVAAWEDDFTGYVIDYGTFPDQKRPYFTLRDARLTLAGVTGAAGLEGAIYAGLEKLTANLLGRAWRRDDGAELRIERCLIDANWGSATDVVYQFCRQSAHAGIVLPSHGRFVGASSQPFSEYKRRPGDRVGHNWRIPNVHGKRAVRHGVFDTNYWKSFVHARLAVPMGDRGCLSLFGDKPEMHRLFAEHLTAEYRVKTEGRGRTVDEWKPRPERGDNHWLDCLVGCAVAASMQGVVLPGTDGQAPAKRERLSFAKMQKTKRR
3556383..3556589                   hypothetical protein; Isop_2453                                                      N/A                 MRPFDDSDLTPPDRFREIAALLAVGVLRLRARADAADPGQHSAPENPEKTGNSCLELSEKTVLSVHTG
3556622..3557119                   putative bacteriophage-like protein; Isop_2454                                       N/A                 MDTNVGKELAALQRLTVKELRTRYAEVFGEATNANNRAWLVKRLAWRLQALAEGDLSERARRRAAELASDADLRLNPPKALPAVPASERTTAHVLAFRPDDRLPPPGTVLTRRYKGEVLQVKVLPHGFEYEGEVYGSLSAVAKAITGSHCNGYLFFRLGDKGGDA
3557116..3558708                   PHAGE_Deep_s_D6E: recombinase; Isop_2455; phage(gi423262352)                         5e-49               MNRNIKNPKPATLPVVRCAVYTRKSTEEGLEQEFNSLDAQREAGEAFVASQRQEGWTCLPERYDDGGFTGGNMERPALQRLLADIEAGKIDCVVVYKVDRLSRSLLDFAQMMQTFDKHRVSFVSVTQQFNTATSMGRLVLNVLLSFAQFEREIISERTRDKIAATRRKGKWAGGHPLLGYDVDPRGFRLVVNEAEAVRVRAIFNLYLEHEALLPVVQELERRGWVNKRWTTRKGRERGGQPFERTSLYRLLTNVAYVGKVRYKDEVHDGEHPGIVDPADFQRVQTLLQRNGQTRGAPVRNKFGALLKGIIRCVPCDCAMTPSHTTRNGSKRYRYYVCSSAQKRGWNTCPSKSIPAAQIEEFVVGQIKCIGQDRALLAEVLAQARQQDGARTSELEAEQRSLEKDLTRWHAELRKLSCQLRPGDDNGSIISRLADLQERIGLVEGRMRKVREQIQTVQQQLLDEEETAVAMSVFDPVWEALTPREQARVIGLLVERVDYDGASGKVSITFHPTGIKALAQQLADQRREKTA