gi|310286520|ref|NC_014616.1| Bifidobacterium bifidum S17 chromosome, complete genome. [asmbl_id: NC_014616].2186882, gc%: 62.76% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 85135..85147 attL N/A GTTCAAGTTCAAC 85345..86595 PHAGE_Mycoba_Breezona: integrase (Y-int); BBIF_0066; phage(gi508177369) 2e-18 MTDTRRRTRGAGSVFRDKNGTWHYRRELDRDPATGRPRRIEAKGRTKAEARTRFDAKVAEMERTGLMPGAKSPLLKDYCERWLADYRTRVKPTTYRTRAGRIRACCEVIGHVRLKDLTAEHIRLCTRTLGARLASSTLKDHYVSLKMVLDQAELEELIPIDPCRRVRPPRVEQRNVDVLGPEQPKRMIEAAASMPQARRGKRRSDEDLEMWALLFELAFETGMREGERYALMPYELELRDGQPGIHVRQQIQRYGKPENVVMPNWLEATHITGTLWLTTPKTRAAERFVPIGTQLWNRLWGWIRANNIGMRDFVFTSARGNPVCSSTERYQWCKALKAAGLPQVKIHSARHWMATMAARANMPDDARIAVMGHTSMQMTMRYTHRDAASLGQLMAAAIPDLGGGEIVEAEIMEDAV 86605..87330 hypothetical protein; BBIF_0067 N/A MPGLIESVPMTSVSCDDDFGVPDAEYWCFLDESGTPDYDPDSKPYFAFGSAVFEGDHGDEYMKVLRARASRTGVQGGFHASHDSNDTKQCFFECIGGMDVKFNATFMAKQRAYPYVKARGNLWLYKWTLYTHTGALVRQLWDGKSRIVVHLVVAKINLSKRERAVKDAVCDVCAQFDREQVHVVPHIWDSNSSAGLQVVDYGLWAIQRHVLSGGIKSGHYNRFVQPKMADDVWYPWGTVEI complement(87466..87849) hypothetical protein; BBIF_0068 N/A MRVEEAWACRVEDDWLPCCDALGLIVLHDKLNARQRLCTLQHELIHAHYHDIGCGSIAGLKAELRARRETALTLISPVEYRLAESAYDGEAYSMAVELGVTMQVLKDYQTLLEQHVRYGAEMVGQQP complement(87869..88015) hypothetical protein; BBIF_0069 N/A MDKNEIARHANELDAQEDIRKIERRVRKDERRVEGTGFKAVESETPDD complement(88097..88429) hypothetical protein; BBIF_0070 N/A MGSKPNTEVTDGAKQIMDYCKTLQVRSGLNAVDFAKKCGMGQNYWYVRARYDAPLTISDCERIAKACGMTTQELFRNALIGEPSSTHPEDYDVAANMDENRDVESETPDD complement(88763..88957) hypothetical protein; BBIF_0071 N/A MLTQRQALEEARGNIAAGTTIAARLKESSQNPEIRELAKAVHYIGFGSQQIVNAFTDSGRVKDL 89094..89345 hypothetical protein with the helix-turn-helix motif; BBIF_0072 N/A MRVDDVELIRANLRGEMARRGKSKADVANALGCSPQYLGRKLNGDAMLTVTDLDRFAKIFNLNFYQLMMLLLQPIDSIKQVNK 89395..90177 PHAGE_Lactob_c5: putative antirepressor; BBIF_0073; phage(gi418488189) 2e-44 MTSNNLQPFDFKGNQVRILTDKKGEPWFVAKDVCNVLGYQNASKAITDHVDAGDKLNNESLSSLGQRGGWVINESGLYCLILSSKLERAREFRKWVTSEVLPQIRRTGGYIHVDAGDDEKTILARALEITQRTLNRQGETIRRQALELEEWRPLALLGEAFVSTDGTMSVTDAAKHFRTLDQRMSRDMVYGLLRGAGYVEARSNAPTVKAIRPGYMVARQGMRDGRKIGKPYARFTAKGASWFVDRFIYGNAQGKLRGID 90174..90401 hypothetical protein; BBIF_0074 N/A MMSAPVDSSRVPLGERLAWTPAQAAQVYSLDYRGLLHAIDAGDVDTFRPPNRDGMPGRLKVSKAAMDRWIKGMEE 90402..90701 hypothetical protein; BBIF_0075 N/A MSSSAKQQETRRRGLQLTARERLATEEAQRIKLLLQQIRDSSKEIHSIFPEWARKTILAFSEVQGTKGLVSRLDHDDEYGDWERFMAILDRLEEKGEWR 90692..90898 hypothetical protein; BBIF_0076 N/A MAMSRKEKILAALWLLAFSASIVAAIWAGMWLTAGLLRDGAFSILHFIVLAVSLPLAVILGRPLGGDE 90895..91341 PHAGE_Pseudo_AF: putative enoddeoxyribonuclease; BBIF_0077; phage(gi431810354) 3e-11 MNVFELSVPGDPLSKARPRVYNGHGVTDRRTRNAENRVYSEFRRKYGDMEPIKGPVRIRLKFWMASRHPRDWDNLAKLATDALNGVAYQDDVQIVEAQVSKVLPDRRVPGSKPGTMRNRKTGDPLLFMGEPYEPHTEIHISEIINPTN 91354..91749 hypothetical protein; BBIF_0078 N/A MNHTDYITQALIEDENMPADLAALYPSASKIADAASTFIDKADQTIAKKNLAGQKAEIVAKCIDICQHVVKEGATISRLLRNPAGIMQRLRETRKPEEPVQPDMDEIIVAEVVDEIKAAHNADEANENGED 91749..92195 hypothetical protein; BBIF_0079 N/A MSANTIEATNDIQTLRHLAAEPSTGELAQQREEALADQREALLIRQAQRISELDERILVLTQERDELKARILEQHPQPGTYPAGKLKVLVKQGRRGLDGKAFTAAFPPAENPRLYELKPKSLTNVAKLVGELAVEQFITRSKPSVVVE 92192..92380 hypothetical protein; BBIF_0080 N/A MNAERIANIIATGITEADVVEDLCDELYMLKADQLHETCERIASQIIKDHRERRARKHGQHR 92364..93446 PHAGE_Mycoba_TM4: hypothetical protein TM4_gp59; BBIF_0081; phage(gi18496942) 1e-19 MANIDDVLAVAQAQADDLPAGHARHDDPNVLTDDEGRIIGLRNEDIDPLTGELRSKPPEPPATSVDTYEEPRLWPEIKMMLESWIRDQPRERQPEIGPSELGTDCLHCLAAKLAGWSQSRKPSWLAFIGTCVHARFEEWFNADQQTISDVMNAENLIEGCLDDMRRRKRFQAEMRVKVGSLSGLYGGTELHGSIDLYDRKTHSTVDWKITGDTTMRAAKANGPSQQYRVQASLYGIGLENAGEKCERNCIFMLPRNKTSLNDAYAWEVPFDPKPGRWAMSRAQLLINLMDCIELADGPEVRDAWIHSLPTSPSHCFQCGSWPDDQFGELSELNASLYPDVPAKWEALKQLLQPTHQPDNK 93463..94275 PHAGE_Mycoba_Angelica: gp65; BBIF_0082; phage(gi304360822) 4e-17 MYGQQMNQYGYQPQGYPQQGYDRQAAPQRPHMNASQMLDQIDSQTSKSVKFQQPGDTVSGIIESVTAGQVHVYDSINQRPTNQPDYWQDGSPKVQVIVTIDTGTRDPSVEDDDGRRSVYIKGWGLQKRAWLNAVRAAGLRKSSDVKPGDRFTATFTGYDPNSKNPNNPAKMFEYTIEHQSAVDQAMQPRQPMPQPAYGMPAPQPTPVMPAQTGPTATQSVTPQQTTQILQLKAVGKTPQDIAGMMGLTLEQVLAVGQSSQQGGQQPEPGF 94531..96918 phage primase; BBIF_0083 N/A MAGKYDNYAPIPAEDLPAKYAGVFKLLDLTFTPPNDFDRVMTITGQSLQLVTDGDNDNRRSRQLVMHAGYQKAIWELREGHLRYCPSQRRLWRRDPDVEDHAGDRRLLNSWHPIKSIEDEYHIGNSANDRNRNYSMSATIMREAKRAQWFRQVERGVRIDPCVWYRQNGRVICVRGDTDMAVTQTFDPKGMSNQAIEQAVSICKWLTVDDKSCANLLRMFATPWLEPFKQLSFVLSGHGGDGKTLLMVNAVQSVLGDRKSYPAFSAARYCEKGFGLASESMNDAMAGMAFVYDDESAGVTEAMLPALRSLSTGATVNARVVGGKYYSMTPTATIVILTNMPFADSSEPSDKRRFVKVEMHRSDGRSFDEYHAIELFIREHPAALYAASCRLWEQGDEPELVNLSPARAISDEMYWIITEILTNEEKYGQLIASRDAYRDEFHKPITGDVMSLLGLANGITKVWGGQKRVVRVQDESRFDVYRQAVKAEEGDDGSPVVPEPPLPLELDSQLPPSLFGFECDYVPANADKSAFNWKKLALDPNVDTSQVPANVEAYAVVPAPGFMVIDMDMSKASGDDGWTVLNRQVGRYGTPAFPATYLVRTPSGGLHAYYRLPEALHGRVKNAVHLKTGEYPDGIPVDLRVERKGYVIGAGSTVNEGDYRVCDLPGDDGIPEASAQICRWLESIGSIENTTPGLSASAPRRQLPAAGGITGLDIDRVMADEPPVRRRSGRPDMTPVPEGQRNQTLHDWAYGRAVNHPENLRQIEADLYERGHASGLKDNELATIWKSITRQLGKE 96922..97275 hypothetical protein; BBIF_0084 N/A MKHPKLFFGNMVIAISMCVPLLALAGCGSMSSAADPSPTTAQCQGSDGWNTCTITMPDTRQVTCIEDAAPHGLALSCDWAHADVKAAKAERAKERNRIVSSESHRRARMARKAGEDG 97268..97753 hypothetical protein; BBIF_0085 N/A MAKRRAGERKPPWLRLLAPDGNIAQLEAAVCGTCGRWVLRCRQGVWEAWDPGVIQGDDLTVAIILGVRLTRLKTVYGMCGPTLIDVCGERGIRSDGQYLAEHRCGFAPISLTPYKPAAKARQPGKPWASGIKLTEEDVREFERIWNMPVKELKCLTRSKVN 97726..97911 hypothetical protein; BBIF_0086 N/A MPNAIQSELILKWHGRGSKAGEIADLLKLPEALVQSVIDHPPQDKDRFKVRFVEQPTLDGL 97908..98129 hypothetical protein; BBIF_0087 N/A MTMAGRDGRKDESIPGRNFHNGFRRETVDIDDPEVRAFIEHCRAGDVSNEETSERRGFREKRTETPEREPCGK 98215..99015 hypothetical protein; BBIF_0088 N/A MECQHCHHTYQDETHPLCPACDLTLTLDPLRLCVWLDPLHASLDATVHPGGHQPTRVNLPNAPTPIRLDVLDLLDTIDATARAMWRRLEGVDALDWRRDAPAATSLRRLLMDISGHPRLTLLADAGMWLDSLDRLCALTLAIIDIPDRPKPIGHCPNPLCGVQLNAIDGQGKVTCPVCGGEWHVADVRLTLLESLAGSERLLTLTECARLLGECGYHVTRKQLQHRRDRGLLTPQTNDSKGRQLFRVRDVMATLPARFDAAPGWGR 99099..99440 PHAGE_Mycoba_Leo: hypothetical protein; BBIF_0089; phage(gi514361030) 3e-07 MSSRPNKRRANGWRRSQLIARHRAMGRDCQLCFRPIDYTLDSGPWRFVVDEIMPVALGGDPLSWANTEPAHAWCNRVKGTHTRAWAIQRIAQLLDTGTPAADNTIPTFDTSEW 99561..99956 hypothetical protein; BBIF_0090 N/A MVSRVCLRCGKVLGKNVGGRRKYCSDNCRKRAADQRRRHPGGTKPVSSVHASSSAPVSGCDYADLLRISLTALKRAVEDDGTPANAVAPLTKQLLAVGKEITDLENRPVDPLEEGVNVSGAADEPFDPETL 99916..101367 PHAGE_Mycoba_Leo: terminase; BBIF_0091; phage(gi514360974) 3e-100 MAQPTSPSTPKLSEIARHLSIPTGIETTGFGRVRTVAGRLGIRFDRWQDDLCRLMLAKRADGEYAASAGGVAMSLCRQVGKTFTVGTNAAIMCLLQPDFTVLWTAHRTRTSAETFKSMQAIVRQPGLTRHVKAIRRANGQESIEFANGSRILFGAREQGFGRGFAGIDMEIFDEAQILTEKALDDMVPATNAAKNPLIVFMGTPPRPNDPGDVFKLKRSQGLANEDGMTYVEFSADRDADPHDRNQWAKANPSYPTRTKPAAMLRMLKNLGEDSFRREALGIWDETTDRRAIDPDQWQQAETGERRPGGWVAFGVDMPPDRSRLAIGACMAYPDGTAHIELAQLKNTHTHGTGWAVEWLAQRWPKTSAIVIDAQSPATVLIPDLKKHGANVTVTGPTDMGRAAGRFLDMLRDRTLTHLRQAPLDAAADAAITRPIGHEGAFGWNKLGTDTDISPLVAVTLALHGAKTSSRRPTGKPQRIIRLK 101364..102839 PHAGE_Mycoba_Leo: portal protein; BBIF_0092; phage(gi514360975) 5e-53 MTSFPTTIAGLTNSQQATYRRLLRRLLAKRARNRTRTRYYEGKNELKDLGYALPPIAKDIEMVVGWPAKAVEALANRVVLDGVTTRDGSELSRTVSDLMDANDLAQTAENAHTDALVHSCSFVAAFRGDTTMGEPEAIIQEFPADCATGSWDPRMHALGEALLFDVSHDDGRNGKVRCGYLMSDGMIVTFAGDGTRFSKQTEAPYDGRIPCELLAYRPDSKRPFGRSRINRTVMSLTDSAVRTFLRSELQAELYSVPPRYFLGVTEDMFTDEDGESIPMWRIALDKVLAIPRDETTGSVPEVGQFQQYSFEPHVTQLRNTATMFAAATSLPPDAMGVLTSNPSSAAAIDKAVKELCLDAESCQRRFGPAWERIIDRAQKYAGSDGMATVRVSAQWRNPATPSRAAAADAAVKLVSAGILPADSEVTWDMLDLSDRQRQTLRREAQKARAQARIDQLRIRTGQIEGAKDGTEQPEPFAGTTPTSGAAARPSV 102934..103944 PHAGE_Mycoba_Job42: capsid maturation protease; BBIF_0093; phage(gi514051830) 1e-08 MRDYTDQASQLANDYYDTVRQLWQEEAGVEFTDFDHTDLIDSDRVLWQQQGGYSNTDYNGLTYTQVKNGQSRSGATIDDLWPALDTADDWQQFIADMISTSTRLTQQRNMRADPTKPRWARVPRGKTCAFCTMLASRGFAYLSEDTAGRQMQYHADCDCQIIPNWGKQALAGYDPDKLYGMWKEGVDAAGDGDWREALRQMRRLHPEQLKDGVHETSGPWPKDVIYPYAGVWEHVFDGHGPGTRIEGKTHFPDDWSAEKVKWAVMEAVAAPDYVKTAGANRENRYKMVDDVLIRVWLQKKRGNDQRFRIHTGHPTTQQERERLWPLISRQLKPTDG 103902..104147 hypothetical protein; BBIF_0094 N/A MATDQQAAEAYRRLREHCASLPADRLQSLDDGLDAGEPYLALSWLIADVLENHIDVPRETLLSAYALLDDADKEEYADMLG 104210..104294 tRNA N/A GGTGGATTGCCGGAGCAGCCGAACGGACCCGACTGTAAATCGGGCGCACAATGTTGCCGCGCAGGTGCGAATCCTGCATCCATCA 104357..104950 PHAGE_Mycoba_LeBron: gp7; BBIF_0095; phage(gi304360956) 5e-11 MFKFSNRNRMLLHRLRFIEGVGGEGSGSGSPGTAGNGGNGNGEPDTPKPQPPKPPEDEKQDPQAKDFSRALAKRVAEIEAKYADYEELKAKAAKYDAGQNDAEARLAKLERRFDEADKAKARRSEVEKVAKETGLPVDLVAMLDGDGDQLVENAKTVNAIIGKLKDPGALAPRVDQAGGGEQLTPRQLLQAAYAEKN 104973..105947 PHAGE_Caulob_CcrColossus: putative major capsid protein; BBIF_0096; phage(gi414088137) 7e-47 MALTLAESAKLSNDTLARGVLETFVQTSPILDRIPFMEIEGNAYAYNEEATLPGVAFRNVNEAYTESTGTVNQKSEKLVILGGDADVDRFIQQTRSNINDQRAEQTSLKVKAISYKFQETFFNGDTAVDAKSFDGLKKRLTGAQVIDGGAKGLPIVGESNTDIHAFLDKLDELLAAVPGINGQNGAIYASAPIIRRIGSALRHVSLDTVLMEDIAGKRAIQWNGIPILEAGQTAGGDQILAANETITPGQSAATVNNTSSIYAVKFGSSEGDQGVTGLTNGGVQVEDLGQLQDKPAYRTRIEFYVGLGVFSGKAAARLKGVLNG 105940..106170 hypothetical protein; BBIF_0097 N/A MARAKQADEEIDLDPTAQAETTAVEPSDAADMPTPVPEAFPPDGHRWERFEAMRPDGVRVMVTRDIETGDQRVTEA 106172..106561 PHAGE_Strept_SM1: gp42; BBIF_0098; phage(gi32469473) 8e-05 MATPASFATPDDLAKAWRTLTTAERERAIPLLAKASRRIRLTCPNWRKAETADPGVCADVACDMVKRAMTAETTNPAGWSQTSSATGPFSDSHTFANPNADLYLTSAEILLLGGRRGAKAFAVSMNGGG 118738..118750 attR N/A GTTCAAGTTCAAC #### region 2 #### complement(115729..116013) PHAGE_Lister_LP_030_2: integrase; BBIF_0110; phage(gi514051961) 8e-05 MVCLIRVVGGGEHQRQADFVEHARQFAVRVSADAPRNLRHTFGTLAIKAGTDISVVARQLGHSDIQTTARYYLKPDLSVLKDMQKAWQKLILTC 116055..116444 hypothetical protein; BBIF_0111 N/A MLQNFLAGFGGVGGACALITLGLKLWPGALDALATGLYAHVRPERLPYDSPLSQHFAKTRQLGERTAKFDERMDELCRDTIKNTIISLIYGDQSHDHSEAVRYELAKLEKLGAQCWIVNAAEKYLEDRQ 116607..116726 hypothetical protein; BBIF_0112 N/A MDDIVMTPEMTPQGDSLPPESIPVVSEEDAAKAVEGLED 116729..117523 PHAGE_Lactoc_bIL309: lysin; BBIF_0113; phage(gi13095861) 4e-16 MASVSALINRMRYWCAVANLGYSQADRWNFNASGGNCDCSSLVIYALREAGFDTGTATYTGNLSGNLTRRGWTRLPANGNPQPGDILLNDVHHVAVYLGGGRLAQASISERGTAYGKAGDQTGRETNIRAYYNYPWNCYLRYGGGNTGTASTGALAVDGNVGPATVRRWQQVMGTAVDGIISGQVVPDGRTYWRPAIDSSVVRYGAGGSDLIRAVQRRLGCGVDGLLGPATIRAIQAHYGLARDASFGPATARALQSALNQGRF 117534..117818 hypothetical protein; BBIF_0114 N/A MAEHAAEDSTLETVVNNLADEREDGQDNTQPDTAYTPVFSKQVRTVVYVLGLVASCVGLGFMTFGDAAIGGYISTVAGFLASGLGVAYNPLRKN complement(117974..118171) PHAGE_Tsukam_TPA2: putative regulator; BBIF_0115; phage(gi326425066) 2e-12 MTAVYLSLKQVGERLGVKNAAAYRLPEPDAMIGTTRGWLPETIDRWNAARPGRGVGGGRPRKEER complement(118168..118317) hypothetical protein; BBIF_0116 N/A MNTRKTIAASAAAFGIASITFGICGKPLPAGLFGLAAGIMAIACGWWAE complement(118382..118501) hypothetical protein; BBIF_0117 N/A MRILEAVDTILGIVANAIATITAIAVWRRTHGPRHGNRR complement(119009..119374) protein of unknown function DUF307; BBIF_0118 N/A MRVLGNIPWIILGGLAIAIGWALVGLILCISIIGIPLGIQAFKMAGLTLTPFGTTVQYGGGVSSALANILWVVLVGWWMALGYLGAGVLNCITIIGIPFGLQSFKMAKLALWPFGAEIANL 119638..119748 hypothetical protein; BBIF_0119 N/A MNLYRYAMFIAHACRGSFVGNILFANPQMALFSMLV 119979..122030 PHAGE_Lactob_KC5a: putative minor tail protein; BBIF_0120; phage(gi90592623) 6e-07 MTSQKTAESGSAASSVKPIDSHARFIVVGVIVVGSFIALLNQTVMSPALPALMRDFNITTGTVQWVTSVYMLVSGIMVPISGYLIDKFSTRKLFAGALATFMVGTLLCAVAPNFVLLLIGRVLQSAGSGVLLPLVAVVPMLVYPPDKRGTAMGMAGIVMAAGPAIGPVVGGLVIDSFGWRLMFIGIAVVALVILVGGTMMLKNVSELKNPKLNVLSVILSTIAFGGLLYGFSSASTMGWASPVVITSIVVGLVAFVAFVYKQVKLDEPLLRVDTLATRNFRNSAILVTLINAAVAATNVTLPIFIQNVLGQSATVTGMVMLPAAAVGIILSPVAGAAFDKFGPRGVGIGGLALMTISLGLLGTINTKTSVLFVAVFCALQASGQAIANMPINTWGVNALPNDMIAHGNAIANTGRQIAAAIATSLLVTAETSVTASHMSQGVKSATASGIAFSYLLCAAISLVALIICIFTVTSRAKEKAARNAKAYEAQASAEVAAETTEGQPAEHHYAGAYVAPASSLFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMKSIATYESRTVSTGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKSVMEHAFDALFPKDDR complement(122451..122705) PROPHAGE_Xantho_306: transposase; BBIF_0121; phage(gi21243165) 6e-18 MLPSTGTVGDSYDNAMAESFNDTYKTELVWRRKPFADLAEPELATFRWVSWWNSKRLHQSLGCRTPEQIETEYHANQAAQTVSQ 122780..123064 PROPHAGE_Escher_CFT073: transposase/IS protein; BBIF_0122; phage(gi26248359) 3e-08 MSIQSRALRPVGAGKTHLAVASGRLACMRAIPVGFFTATGLLMQLRRAKRGRLDAELRQIARARLPVIDEFGYMPIDRTVRHGRLTGFGGRLLP complement(123512..123832) hypothetical protein; BBIF_0123 N/A MRRWRRQDFGCWRVELVADMPRVDCPKCGVVVAMVSWAEPSSRFTRDFESECAWPVSVANQKTVGGFPHIVWRTAGDIARRVAERLGTAMPSLFDGLAAIGVATMC 123851..124210 PHAGE_Plankt_PaV_LD: ABC transporter; BBIF_0124; phage(gi371496158) 4e-06 MDCLSKADFGDRLKTLPDGLDTPLYKELDKNGVEVSGGEAQKIDIARALYQDAPFIVLDEPTAALAPIAEAEIYAKFNDIAVFDHGAIVRYGTHDQLVADENGKYYELWHAQAQYYVKE complement(124312..124719) hypothetical protein; BBIF_0125 N/A MAAIRERDIPAGERAWQQWNDAAQRLREDGADSESLTPTLPRPTWAMAVRYTLYLLERKAPGPGVEVRVAPWGAVKILDGPASDPHNLTPPDVIELDPEVWLRLAAGITTWPQEKDAGRITAVGERDDLSDLLPL 125056..127509 glycogen/starch/alpha-glucan phosphorylase; BBIF_0126 N/A MTEITAPKSPVTTAEFADGIREQLKYSQGVTVEQATPADVYVASSLVVRHYLQDAWFKTQQDMVNGNTKAVGYLSAEFLMGKQLRNALLNAGMIDQFNEAVKDLGFEPQDVIDVEHEPGLGNGGLGRLAACFIDSLASLGVPAFGYGIQYKYGIFEQAFDKDGKQIEKPDYWLTNEEPWGHIDYNRSQKVSFGGEVVEENGKKVWKPAWSVRAVPVDYMVPGYASGRVNTLRLWSAKSYDEFDLLTFNKSEYLDAVKPQVKAENISKILYPEDSTPQGKALRLEQQYFFVAASLHDAIRVFYPGQSKPDLTTFPSKITFQLNDTHPVIGIPELMRILIDEYGYDWDTAWSITTKTFNYTCHTLLPEALEVWPAKLISELLPRHMEIINEINEHFLAELKTKTRDKAKIERMRIVTDEENPKVRMAYLATAGGSHVNGVAELHSELLKDVTLRDFSDLYGDKFTNVTNGVTPRRFIRLANPRLSALITEGLGTDKWLSDLELLKGLEPLAKDDEFVKKFAAVKQANKEDFTAYAKREYGFDLDPNTMFNTMVKRLHEYKRQSLKILALIAKYADIKSGRVSADDVLPRTVIFGAKSAPGYYLAKMTIQLINNVARVVNNDPDVKGKLHVFFPWNYNVRLAQHLIPATDLDEQISQAGKEASGTGNMKFALNGALTVGTLDGANVEIRERVGAENFFLFGMTVDEVDKLYEDGYSPAKYYEADPRLKAAIDMVSDGTFSNGDRNTYAPLVADWLTKDWFMTLADFTAYSSIQSEIEALYRDPLEWNRKAVLNVANSGYFSSDRSIQDYLDNIWHTSPLA complement(128315..128536) hypothetical protein; BBIF_0127 N/A MENKSSNGWKFFALFFGALLAAVVGLYIYKQQNPDYDPWEEPWENSSSPVDLGLTKDADKGDADEAEAAPEAA 128723..129508 PROPHAGE_Escher_MG1655: rhomboid intramembrane serine protease; BBIF_0128; phage(gi49176353) 2e-08 MSNGRFSLFPGAPSAHNLFSKRAIQYQWRSNGPVFTSAIIIACVAVWVVEMVFSLFWPLGLATMIYYGRFDPMTAVAQPWMFLTSMFLHSPKSVLHILFNMLALWSVGPVLEKMMGHWPFLALYVLSGLGGGLGLMSWAALWPGGTGWLGGAYGASGALFGLFAAMLVVYRRIGEDIRSMLVWMAVNFLMPFLVGGIAWQAHVGGFIVGGVFTWLLISGVHALRGKSLTFRTMVYGAVVLALIVAGVLVCNLSNPALTYIM 129505..130242 PROPHAGE_Escher_MG1655: IS150 transposase B; BBIF_0129; phage(gi16131429) 5e-09 MIGLLPGESPTWRGVFENSRRRYGYRRVHLELRGAGVVVSAKRVMRLMARHGLVPVSRSARRYSSYRGEIGEAPVIHSDRGCHYRWPEWIRICKGHGLTRSMSAKGCSPGNAAVEGFFGHLKQEFFHKRDFTCVTVDGFADDARRVHDMVPRRTHQDRVRDEHHGQAHQAGARRLNTCDNLPDNHTDNEVQQNVATPELVMGLLWGGRGTGEWLGVEASHQCELHACSFPHDVENFVDNLGISWV #### region 3 #### 474724..474738 attL N/A CGGTGCTGTCGGTGA 478871..479476 PHAGE_Staphy_JD007: tail lysin; BBIF_0405; phage(gi428783012) 4e-09 MLVTLTACSPLDMLAFLGGCKNTGGSSTVQASQASGEWTGLVGRHQDQIKQMWPGQVSFCAPYDYGFQCTWWACMRQKSLGHDIGQYWGNGGEWDTSARNAGWEQGAQAGGIIVFNPGAGGSSSVYGHVAVVEQVNGDTVHTSEDGTGWGKVATRSFSASHPPAGISYWHPKGGGGAGAESVVQADSPSHSGPASGLATLC 479520..479807 PHAGE_Lactob_phiAT3: putative transposase A; BBIF_0406; phage(gi48697273) 2e-06 MADPRHPRHCEESFKRRIVRLYENGRPAREIKDEYDISRSTLHRWVQGIRDSGSAKAADNRTPERNEPVELRKRNGQSEMEVDVSEQAAPVFARR 480040..480804 PROPHAGE_Escher_CFT073: transposase; BBIF_0407; phage(gi26246249) 2e-33 MAGDVAGNDNGAVTDSRSLVDSLVASGALDPLFERIDGGRIELTGDGGLPGELTRVALERGLQAETTSHLGYAPGDGGSKASGGHANLRNGSCPKTLSTPVGEAAVQVPHGRDGSFAPRLVPRRSGRLGGLDEMIISLYAGGMTVRGIQHHLEKTIGADLSPETISNITDAVSDAVLEWQERPLDEFCPVLYLDAVRVKVRDNGRVPPKAAHIAIGVDMDGFKHVPGVWVQDDGAPPSGRTCAPRWPTGAWPTR 480801..481397 PROPHAGE_Escher_CFT073: transposase; BBIF_0408; phage(gi26246249) 3e-28 MIVCCDGLKGLPEAVEATWPKAIVQTCVVRLIRAANRFVADHDRKRVCAALGSVYCAPNGQAAEKALGEFAESGLGRRYPSVAATWKRSWDRFVPFLRFPPMLRRVVYTTNSIESLNYRLRKVSRDRGRFPNDQAVVKLFWLAICDIEDKRSLRRAENGNTTRRESEGRLIEGRMTTNWKQALAQLAAAYPERMEPYL 481421..482119 PROPHAGE_Escher_MG1655: IS3 transposase B; BBIF_0409; phage(gi16128284) 5e-21 MTSSDGHERCGAGKIKAVLERRGVTASGRRIVDIMKRRGMAGAYARRTSEPHKTRADEAGLANILDREFDGYGPRAHLASDLTYVRVGGKWAYACLLIDLANRGIAGHSADTGRTADLVMAAFATLDFPLTGVEVFRTDRGGGFDNARIDELLDVFDIRGSPSGKGNPYDNAVVESTNRLLKKELIYRNHYTSLEQLRSDPDDYVWRSDNQRLHSTLGYRSPKEFTEQGLVL complement(482253..482480) hypothetical protein; BBIF_0410 N/A MLTDHPDPVSSVIPNHWRMRRERSGEATEPEPMCLWSNNVYGVTTKSERRKRSYWTRTAAGNGIGGRKAPVPYGS complement(482887..483900) Transcriptional regulator containing cell envelope-related transcriptional attenuator domain; BBIF_0411 N/A MLLVVLALVLVLVVFPVIAIWWYAHMIDENIAMRNAEAEAALSGPEPNSDGAFYALLMGSDRRSNKESGRSDSIMLVRVDPKRAQADIISIPRDMMVSISGGVSKINAAYSYDGAAGAIRAVSKFAGVPITHYMEVDFSQMVALVDELGGITVNVPESFSGGNGGGSLKAGTQTLNGEQTLVFTRERYKVQGGDFSRAQAQRIVLTAIINKILDQPVTKWPDLVRQFSKGLSTDMSVTDFLSIGQKFYGKSVTLNTAGCPSYAFEQDGVSYVGVEYEEWQDMMRRTDAGLGPKSTIDIPEPQASNKKLGAASNAESPKDYKELVNKSLNSNSVIGNE complement(483849..484235) hypothetical protein; BBIF_0412 N/A MVEQMTANRPNTPVDKMTDDLQQFFRKMAEEEAEAGESADGGTAGESMDNDADMLANVADPAPRPARFWVRKATRAAKRIAAAAVATAVDPPVPIRAVRAAAAERRSAVAWQCFWSSSPWCWSWSSSP 484607..486190 PHAGE_Lactob_LF1: tail fiber; BBIF_0413; phage(gi418489400) 1e-06 MNRGRMMNEHEAHERDMQWDDAGDGAGLPETGERDAVQGIEPGAERHAAEYKAVALGDAVAADAAGAATSVIGNVPVPTAAEGKTEPAAQEGAGAAGQQAADDEGMQFLDNPAWDIPDVMFPSMGGVKDASSGSGPSYGAPSPHVPLPEPEDTVRPVHVSASDPLGLEDVSDIPAVPEEEEPQGNNDVTMVIQPLSAFPTPTQSVPPTAGVTPQTVPLPPEAGAAVPPHGSGEPGGKADGSSRKQHGHRRAIIIAVVAVVVVALAATGGFLWWRHVQNQNELDQAASLCKTSKTKADKAFSELQSALSEAKPAQQIPQGDVSDPTVLETLNGAVTKASSASEPVSCDVALGTETLNANASKNKQIARASTKAKTNVAKATKAVNDGKAEKIEFIKHELQTAVTGAQKIYDDSKGVVLDDSTRTTLQSAIDQANALLQQDDADLNEMQQSITDVKDAGDAVTVSMNEYTAQQKYLEQQRQQEQQRQQQQQQQDDQNDNGDDLNGSTDSQIGDSRGHETQPTHPQGSDD 498416..498430 attR N/A CGGTGCTGTCGGTGA