gi|304319677|ref|NC_014414.1| Parvularcula bermudensis HTCC2503 chromosome, complete genome. [asmbl_id: NC_014414].2902643, gc%: 60.66% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 1595681..1596958 PHAGE_Strept_6: terminase large subunit; PB2503_08059; phage(gi93007440) 3e-68 MRSVLEGKSFLEGLSSTELKRALHEWKFYARQDQWNPPGDWTTWLVLGGRGAGKTRTGAEWIAAQIAAGRRRIALVGETYEDAREVMIDGPSGLCAIGTADSRPHYESSRHRLLWPCGAEAHIFSADDPDGLRGHQFEAAWSDELAKWRQPEAAWANLQLGLRLGDRPRQIVTTTPRPFPLLRLLMNDDRTVVTHAATTANRAALAETFLTEVTRTYQGTRLGRQELEGEVLDDREGALWSWSMIEASRLAGAPRCDRVVVAVDPPVTAGPDADECGIIVAGRIEGIEPEAVAILHDGSLAGASPRAWAEAVVTLASRFEADRVVAEVNQGGDLVEEMLRLADPNLSYRSVRATRGKIVRAEPVAALYEQGRVKHAAPFPVLEDQMIGFSGQGGQGSPDRLDALVWAVTDLLLTPRPSFPSIRTI 1596966..1598129 PHAGE_Salmon_ST64B: Portal Protein; PB2503_08064; phage(gi23505449) 2e-18 MRLFSRKPTAEATDHKSLGVPFLMNADWGASPRWSGRSGANLAKAGYGQNPVVYRCTQIIAEAAASVPLMVRCDHQVVTDDHVVRRLSRPNADQSQEGFFQSIYAYLLLAGNAYIEVVQGAEGPAALWPLPPEAVEIVHTPRGTLDHYRHRTGGQGRRLAPAVNGAGGVLHIKTANTDGSPKGVAPIAVAAKAIDLYEAATAWNKSLLDNAARPSGALIHRGPEGAATLTAAQFERLKQELAATYQGPGGVGRPMLLDGGLEWKPMSLSPSEMDFKELKHGAARDIALAFGVPPMLLGIPGDNTYANYREANLAFWRQTILPLVKKVVADLSVIFCREEVSITPDTENIDALFQSRVDRLTLLLETDVLTNAEKRALLGYPSDEQAS 1598126..1598362 hypothetical protein; PB2503_08069 N/A MKEDRHFRLIVALGGVLLTQSLAALFWAGAAAERLAQLEARENQAQELLERTARLEEQGSFVLRSLSRIEDKLESPRP 1598359..1598829 PHAGE_Salmon_ST64B: Pro-head protease; PB2503_08074; phage(gi23505450) 3e-15 MTSTAPTSVFRISGYAALFGRRDLSGDIIRPGAFTTRKRGQKLVPGHAARVMMLYQHAADRPVGLWRGMREDDHGLFVEGDILLTTSAGRDLAALIAGGAIDGLSIGFRPGRARRLKSGERELLSVDLWEISIVSFPMAPGARIIRAGIHPSHNAQ 1598841..1600031 PHAGE_Salmon_ST64B: Major capsid protein precursor; PB2503_08079; phage(gi23505451) 3e-74 MDLETKALGSAEEASVAELLYAFEDFKQTNDQRLADIERRGSADPLLSEKVERLNAVMTRQQSALDRLAAEASRPQTANGADLVSEEKQAFDAYIRAGNAIPTELKSLAGGSGDGAVLSPQETSDVIDLKLRDASPMRQLATVRRISANVFRKPVPLTPIGAGWVGETAARPETTTPTLVAIDFPAMELYAMPAATQALLDDTVVDLSAWLAEEIQAEFAAQESAAFVSGDGVNKPRGILDYSTAPDDTRAADELGTTPSSGATIDADDLIDLIYTLPQAYRQNGRFMMNRSTLASIRKLKDTEGNYLWSPGLGGQTASLLGFSITESEHMPDVANGETPIAFGDFQRGYLIVDRAGVGVLRDPYSAKPYVLFYTTKRVGGGIQDYAALKLLQMSA 1600083..1600622 PHAGE_Rhodob_RcapNL: hypothetical protein; PB2503_08084; phage(gi461474967) 1e-07 MFELVTPPSVEPLALNDIKSVLRIDHDRDDDLLTEMHRTARTYLERRLGFAFLTQTWQGRVDITPQASIRLRPFPLSSVTSVRLIAPDGMTSDASTESYQVTTGRQGRLTWVDTAAARLEVSFVSGVAAATEIDADILRALYLLTAHYYEERELFSRDRYVPVPIAVDALTASYREMSL 1600619..1600933 hypothetical protein; PB2503_08089 N/A MIGQLKEEIVLLTPAPVPDGGGGTAPSFSETGGIAAAITSLPARTIRFADRRRQVLRREVTIRYRSEVTLSCRLHFRALDFDIVDLRPDRDRRFLTLIAQERAS 1600930..1601340 PHAGE_Rhodob_RcapNL: gene transfer agent (GTA) orfg8-like protein; PB2503_08094; phage(gi461474971) 3e-08 MTLPAAWSLQVGLRAHLSADLDLATLLGTPSRLYDRVPDDAVFPLLTLGESRISPLDGDVKGMVHDVRINAFSRWGGRKEVRLLTDHLHTALHDRTFPIEGYRVVSSRFVFADLFRRPDGDTYQAVSRYRIVTSVA 1601352..1601762 PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; PB2503_08099; phage(gi461474972) 3e-16 MTPVPGKDILIEISDGQGGFEILGGMRAKTFSLSTDTVDVTHAESAGWRALMPEAGIRRMSVSGNGLFIDDQAAARAQNSLLSAQVDEMRLSLPSFGHFVGPFMVTTIDYSGTYKGEATVSLSFASAGEVQFTGSA 1601762..1602094 hypothetical protein; PB2503_08104 N/A MGSTATIRIGERQVGLSLTLGALAEIEDALGAPSLSELAVKLANPSAGQLLVILKALMRAAGDEDAFDRLEGEGVNLREVLAAIAALFRDGLGGPLPGKSTQTRLAGVAG 1602259..1602792 PHAGE_Cyanop_MED4_184: tail tape measure protein; PB2503_08109; phage(gi472340568) 8e-05 MSETDPRVPGLDDAALSQFGESFQRLVEEDVLPLTEVMQAAFAELGDTIGEGLSDAARQGQLSIRSMVEDVLRDLSRLAAERLVQGPLEGLAGRAFGGGRAEGGAVDPTATYLVGERGPELFVPPGAGRIATPPSSLSLSISISGDGAGPAADPLRRSSRQIARQVGRLLTQGGRRD 1602785..1603408 PHAGE_Roseob_1: putative glycoside hydrolase; PB2503_08114; phage(gi331028135) 1e-23 MIDGFHDVQFPTDLAFGSAGGPEFMTDITALSNGQEVRNARWQGARRRFLVSLGPRAVGRVRELIAFFEARQGRRFAFRFKDPFDHSSGPGEAVSPTDQEIGTGDGVTSRFGVSVQVAPSLPPRTNILPVVETIGVAVDGVVLTAGQFTYDDLENQVVLAQPPAIGSTVTAGFEFDVPVRFESDRLVVERHAGGGEGPEIGLVEVAR 1603408..1604274 PHAGE_Caulob_phiCbK: putative tail protein; PB2503_08119; phage(gi414087810) 1e-17 MRPIDDVTAARFARTVSSLCTCWQLILRDETRIGMTDHDKSIAFEGVVHAPGHGAEGRALSVSDDLRGDDSEILALLSLSGIDRNAIDHGRLDYARLEIWRVDWESPDARILLRQGRLGTVTRHGEGWRAEFLSLKDALGQVTGRRFGRVCDARFGDARCGLDIAAAPLKQLAAVTMGTEEELIVSGLMDDPSHYAMGSVEVTDGPLAGLSRSIRVAGAVGDEVSLSLWEPFPDSLLPGTGLAVVKGCDKHFSTCRERYANQANFRGFPHMPGTDILLKAAQPAENVT 1604271..1604717 PHAGE_Rhodob_RcapMu: putative tail assembly protein; PB2503_08124; phage(gi356870891) 4e-05 MRALDDVHIANAARRWLGTPYRHQASCLGHGADCLGVIRGVWREVVGEEPQALPPYAPGWARGGDAGALGEAAARWLERETGPQDPPPPGRVLLFRLARQGPITHCGIMVEGGGFVHAYQNRAVTLSRFGRYWQARLAGVFRFPLTEG 1604717..1608520 PHAGE_Caulob_CcrColossus: putative tail protein; PB2503_08129; phage(gi414088179) 2e-27 MGTTLSTAGSLLIEGARRLTPGLIDGATAYAAGQVFTAGQNLLFGPVSRQSEGPRREEIRLQTASEGRGIPRLFGRQRIGGAVIWATPFEERTEVTESSSGGKGLSRSVETRHVTYLYTVSLAIALCEGPITRIARIWADGELISLEGIDVRVHHGTETQDPDPLIETVEGSDRAPAYRGIAYVVFENLPLGRFGNRIPQFNFEVERQCPTDDPYSLELALEAITLIPGAGETVYDPSPVYTEEAEGVAKAENVTNGLGLPNATASLDHLAATFPNLKAVSVFVSWFGDDLRAGQTTIAPRIEDRARTLRPEGWSVAGENRATAREVSRIDDRPAYGGTPSDKSVRALISDLRSRQLSVVFSPFVLMDVPPGNGLPDPWGGEEQAAFPWRGRVTADHPNDDGTAAARQAVEAFFDRYDSMILHYAHLCVAAGGVDVFLLGSELRGLTRLRDDTGAHPAVDRLRQLAAAVRQILGPDVQLSYAADWTEYGAYHPDDGSGDVLFPLDSFWADEAVDLVAIDNYMPLTDWRDGRQHADAALFDGPTDPDYLAAGIAGGEGYDWYYADAAARGAQDRTPILDTAHGEDWIFRVKDLRSWWSEPHHARPGGARAATPTPWQPQSKPIWFAELGCGAVDRGSNQPNVFFDPKSVESGRPYFSSGARDDRVQRRFLEAHLCYWGDPQNNPISAHYGGAMIPREGIFAYSWDARPFPAFPLRRDLWADGENWTTGHWLTGRAGKVPLGALIKALTSEAGIGAVDVSAVDQLVTGFLLPGPMRVREALGALLDIYQIDMVERGALLVMRPRAGRPALTLGLEELAVVGDEPPITIERLPAEEVPGRLRLTFTDSLASYGSAEVAISDPHRQGAVTAFRETALVLEQGEAEGRAASLLAEAQAATVQIRFALPAHRLEIEPADCLELVDGDRIWRLRLTEILDGPVRQVEGVTIAEGSFQGIHGALRGRSADMAPPAGAPAVAFADLPLLPTGRDEAVLYAFAAADPWPGSVAVHAGAAADAPLAFSLSSPARLGRLTAPLGPGPLYRWDRAAAVTLTLPLGSLASVTEEAALSGATLTAIDAGSGRWELLVWQDAILLPNGDWQLTTLLRGLRGTEAEAALGAPAGARVIFLPASPKAVPLSPDIWGESRVFQAGPTGATPGDYPFVTTTVPVVGAGARPFSPCHLRARAEGQNHLRVSWIRRSRIGGDRFDREIPLGEGREAYILRGYAEDDSEIVTQEVTSPTALIPSAGLKRLEVTQWSETFGEGRAAVLHLS 1608541..1609545 PHAGE_Cafete_BV_PW1: putative DnaJ/Hsp40; PB2503_08134; phage(gi310831116) 3e-14 MAEGKITARHPLWSALFLSQNPYTVLGVSRQATADDIRSAYRRLAKQFHPDKNQGNAAAEDRFKAVNAAFDILGDTEKRRRFDRGEIDADGNERVRVNPGAAYGARPRGQSGPFKGSGPSTRQPPPGGFDDISDIFSDIFGRSAQGRARQGSPSRGADIRYRLTVDFLEAARGTTKRVVLQGGQSLDVGIPEGLRDGQTLRLRGKGKPGANGGPAGDVLVEVSVRPHPVYSLKGDDVTMELPITLKEAVMGGKIELPTLRGTVMIRLPANTSSGVSFRLREKGMKNPKTGTIGDLYAKTSIVLPEEPNEALKSFVEAWKEGDDQPREDLFGAAD 1609688..1611241 PROPHAGE_Shewan_MR-1: serine protease; PB2503_08139; phage(gi24375430) 2e-68 MFERISIMNSANFRRSLVAGVAGFALGIAAGGTLLAQEGPKEARPQLMAPDPGFIQQLSFADLVEEVSPAVVSIRTEADVPVSARMGIPPELERMLPPSFREFMPEMEEEEGETTRRSLGQGSGFFINDRGHIVTNNHVIDGADEITVVLNNGDELTAELVGMDPWSDLAVLKVDPSPDQRYVQFSEESDLRVGDYVLAVGNPFGLGGSVTSGIVSAMDRDGGARNPYSGFIQIDASINRGNSGGPTFDLRGNVVGVNTAIISPTGGNVGIGLAVPAELAADVVRQIIDNGAVTRGWLGVGIGDVDDRLAAAVGLDSPVGAIVQSVQPDSPAEKAGFEEGDVVLEFGGKSIDSATGLTRVVGGFEPGKSYKAKVIRGGRERTLTVTLDRRDPTEARAAGGADEGERENSSAAPTETELGLGLTLSSLTTSLRERYGFDEDTTGVLIAKVDRNSESAEAGFREGMVVSRADNETITQPEDLVKAVKAAKQRGKEALLVRVQTPRQGAFFLAMPVEGQS