gi|301065125|ref|NC_014334.1|  Lactobacillus casei str. Zhang chromosome, complete genome. [asmbl_id: NC_014334].2861848, gc%: 46.51%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
980249..980261                     attL                                                                                 N/A                 TGGAGGTGAGGAG
complement(980331..981479)         PHAGE_Lactob_Lj928: putative integrase; LCAZH_0995; phage(gi41179288)                6e-33               MAIKKVELKSGAVRYRVTVNAGLVAGKRKNIVRNVQSMQKARLLESKLKLDVANGLYDENDTTPPVHTFSDLYNQWWPIYVQTVEGSTAYKTKQLFNNHLIPMFGSKTLTAIKTGSIQSAVSQWRETTTKAYKERFIYLKKILSFAVKMQYIEKNPADGVELPRGVRSGKSPVYWDNKQVARFLTCIDPNNDPEKYTMFLLMVSTGIRREELCALNVSDVNFKTSTLSINKAYATGLNGKESIKGTKSTAGMRTIPLTPKVTIQLKKWIALLDASKIISIRDDRPLFPSPQHFEKRLGINRPNKWLKDIIEANHLTPRITLHGLRKSFVTNMIRSGVDVSTVQRLAGHSTPDVTLRIYAGMNQSDAREGIDKLAEYMEQVTF
complement(981469..981585)         hypothetical protein; LCAZH_0996                                                     N/A                 MIIIMAEKSAATFSPFPAKTLQSNTACPAWRIGEEYGN
complement(981643..982206)         PHAGE_Lactob_AQ113: putative transcriptional regulator; LCAZH_0997; phage(gi446730276)     3e-10               MKNRIKAFRYEKGWTLSQLAKKAGMPITTLSNYERGTRTPSAEVLKKLADIFETNTAYLMGLTDAPAETLTNSNLKNIKFEVRSEAFQRLANIVLSIGSEYGGNIDEDSENIVSHILRFYISSSRSEHLHENIEELQIVLSLLVQLVDSDSRQKPLGVDDFVKIQNAINNQISRLYLNNHGQYTISD
982351..982626                     hypothetical protein; LCAZH_0998                                                     N/A                 MQLQISTTSEFENKLRSLVRQTVAEMMPQQQTNQPQIPEFLNLGEACKLLSVSRGTLDKLIKRGEIKVTHVNTAKRISKKQLIEFMASREV
982696..982917                     hypothetical protein; LCAZH_0999                                                     N/A                 MKLFSKEEMALDRELGDLMDDVSLNILAITEDSSVTVGGKHVPNSELAITAAKELLRVSEILKLYENEDDADD
982910..983044                     hypothetical protein; LCAZH_1000                                                     N/A                 MISIITWLLSHPLTVPALCMAFLIGAVCGAYFQFSEDDRHAKNG
983028..983219                     hypothetical protein; LCAZH_1001                                                     N/A                 MPKMVSTKYGWQWRDYVQADADCDRYWQAQKAEKRSLIEATKKSPRVAPQGEKKTSEKLYINF
983264..983539                     hypothetical protein; LCAZH_1002                                                     N/A                 MMKNVSNSTKAPDLGEASWNLSTAKGLLEALSDEFDIMEGSVVSYQSNRNEKNAAILAYGTDRSFYTWMALLKAIQEYVDSSLATIDEVNK
983536..983724                     hypothetical protein; LCAZH_1003                                                     N/A                 MMKEDYYTTAQALLSDTSAMVNILRHQINNEQQSALADTVADMIIDARRLLMEGDAVDGRRA
983699..984535                     PHAGE_Lactoc_bIL310: hypothetical protein bIL310p24; LCAZH_1004; phage(gi13095885)     3e-21               MLSMVDVLKVALGYQQHGFAVYPLAPATRTPINGSHGYKDATKDPEQAKKWWGEHPNYNIGLGLDGVLVFDIDMGHKSEANGNESLAKLSAEGRADQIPSTYIETTPNGGLHIFFTYPKELQLTSRSDLFSKNGEKTGLDYIATGVPVFPSIRENGMYQPLKGHKITKLAPVPQWLLDEIQRVSHPNPQLGGSTVYRGKRWTGKLLDEIVNGTSTGNRNDFLTMIAGKMFFTGAEPQTVYNLLFTTNDNYLDTPLSEAEVNKIFKSVLKAEERRRAVG
984528..985952                     PHAGE_Staphy_2638A: ORF003; LCAZH_1005; phage(gi66395453)                            7e-67               MVKAMPEDIKQEAKKVVNVDFTGQEQWRNDLKLDGNGGIRKDSVVNIQLLLDNDQAFANVVAWDDFSEMLIKTKGVKGLPIRKGFWTDEDDAVVRSYMERKHNLLFSKQNEQDAMVVVGKEHSINPVKDWIETEKWDGTPRAERYFIDYLGAEDNEYTRAVTRKWLAGAVKRVYQPGCKFELVPILEGKQGLGKSTAARNLFPTKFSDSLKSMGKTDEDYKKLQGNWIMELGELSAMKKTEIESAKSFISAQSDSYRGSYSHYVYPHLRKCVFIGSTNQQDYLKDATGERRFFPIRCGVTKPTKVVWRNEESVPKINHDVHQVLAEVKTWVDAGESVFADDKLMQLAKPYQQEAETVDPMKEAIEDFLNMKVPSNWEKLSLSLKASFFHTHIDHNGDVATWLQQHLDAGELQPMQQTTTREIMEVVFDKSVDRYLMGRTNSDAKRIKLIMDNMPGWQAQRIRIAGGQPRGYVRQ
986225..986566                     hypothetical protein; LCAZH_1006                                                     N/A                 MTKTAYRKAALVDVKHDRDKWAELGALVKERYLVRSMTPKDWFIIVKQREGYEIEVYPTFEMSDGFQFSHVNLLTRSSYGSISHIAYHELCSSASDTISSIDRMIDLVKDKRY
986649..987023                     PHAGE_Staphy_phiPV83: phi PVL ORF 63 homologue; LCAZH_1007; phage(gi9635713)         6e-15               MIPFNQRFCEEHKQDKSKQATNQERMQYEEKELRFYKSTTWTKLSKSFRLRNPTCASCLKRGIIRQAVLVDHIEPIKTAYGWQHRLDESNLQSLCQTCHNAKTAREVAQRRMRSPKRSTPARKF
987148..987618                     PHAGE_Staphy_phiPV83: phi PVL ORF 1 homologue; LCAZH_1008; phage(gi9635714)          1e-18               MGAPLKSVTNLSAHLSKKQLADRVASEKALFTYKELQVQPPTWLDDYAVTEWHRIVPLLKKDIPVSELDAALIASHCQAYSDIQKAAELIQEQGMMVETTDSVKANPAVKMKLDATNQMMRIDEVLGLSVYSRAKLALKSETKKKPDDPFAELVSS
987615..989318                     PHAGE_Lactob_LF1: bacteriophage terminase large subunit; LCAZH_1009; phage(gi418489385)     1e-118              MNYATEYTDKVLSGEIVAGKKIKQAARRYRRDLRASKRKKNPWPYYFDEDFANKAIEFIELMPARDGSPLKLELFQKWLISELFGWRDKETGNRRYDRAYISMARKNGKSFLMADLGALYLLRENKPAMNREIVYTANSNAQAHLAFDMLSSGLRQVSKMSKSVRDRLKINRNEIIDLPSNSRAVPLASDLHSLDGYQSDLAIIDEFALARSDEILRTLKTGQINSDNSLLAVISTTGPDLNGPMYKEYKFVSKVLTGREQADRYFIAIFEQDSKDDAFAPETWEKSNPLLANAERAKTMRPSLQADVDLAAKQGTLRPILVKNFNMWQSARADSYISLDDWEKATIEPPDTRDKDVYIGLDLSKSSDLTSISWLVPEDGYLYADSHSFVGTKYGLEEKIKRDGFDYISGASRGECSITKLDSGMIDYDEVLRFILDLIERNQWNVRAICYDPFAMGYLIPEFEKRDLPLLEVRQGVRTLSIPTTRFRDDLFNGQLKHPDNQLLAYAVNNAILKYDANNNPIIDKARNATKIDPVAALMNAYTIAMDQSKESEVADNDFYSSDDFSF
989284..989463                     hypothetical protein; LCAZH_1010                                                     N/A                 MTFIRAMTLVFNVQTVLLLLGLICMVVGIWWLFGFGVGMIAVGTALISVAVIINFNKGR
989468..990652                     PHAGE_Entero_EFRM31: portal protein; LCAZH_1011; phage(gi327198113)                  2e-50               MSFFTNDTTQPRDDNSDPFLDALVSMTSNDSGLYVGIGALRNSDVFTAVRVIASDLATNPIEYSDNRISVLLNKAPNGHMTAWAFKFAIAANMLLNGNSFARVTKNPSGQVTGFELVPNSQMVVKQDDTTGIISYEYTPDNGRSQRLNASEVLHFKCFTQDGYKGISPLYSLHDEVGVQKSGHALLKGFFNSGVQGTGILKVNKTQLDTKAKENIRNKFEAANSGDNALKTIILDNDMDYKQLEVNTDVLNLVNSSDWTTKQISKAFGLPLDRLGIESEHSNAVQSNVMYLQNTLIQYFTCFTSEMDAKLSTGDNRFSFNTDKLFSADPATMQELAVKGLQGGVLTTNEARAKLNLPPITGGDDIMASLNYTPLNNLTNYQNTRQRSDPENESR
990639..992192                     PHAGE_Entero_EFRM31: major capsid protein; LCAZH_1012; phage(gi327198115)            2e-44               MNQDDVEKRLNPDADLAAADATKTDDDQDKAKTGSKKLSGYAVVFNSPSKDLGGFKEVVDPHAFDNVDLSDVYMVSNHDFSQVLASTKAGTLTLNVDDKGLQFEATLPDTTTANDAYNNVQAGNLSAMSFTFNAAPDGDTFTKDDSGQVIRTIKQVKSLFDVSLVAIPAYDDTNVQVDKRSYTEWLKDHVEDPEQQLPPTEKRKGVNHMTEKTIIDKEEHTESRAYEDYIRSMGEQRDGLTTTTAGAVVPKEVINDVWDLKQSDYDLAKYVTVKQVGTPVGTYPIALTNNGVLATKAELADVADVDANMFKGVDYKVATRAGKIYLSNELVEDSEVDIVAEVKNQLKKLVQNTDNSNIISVLTGKTGTNDNFKHITGTGLDDLKQTFNVELDPALSLSVIVNQDAFNYLDTLKDSEGRYLLQPSITAPSGKQLFGAPVIVIANEVLPTDKAGTYRIIIGDFAQAIFLAQKNEVNTQWERFDSYSQGLAVVIRNDYEVVDPDAARIVDITPVAATPAA
992248..992538                     PHAGE_Entero_EFRM31: head-tail joining protein; LCAZH_1013; phage(gi327198117)       7e-06               MSVTTEDLKKALRISHSEDDAMLSAYLLTAKQFVISAVDQTLTDENFGDDPRFDFAVSLLAQHWYINRGVDGATYVPDSVVSMIQQLRGVDYATGK
992522..992863                     PHAGE_Entero_EFRM31: head-tail adaptor protein; LCAZH_1014; phage(gi327198118)       3e-10               MPLVNSISQLNELITLVSYTMGNVNGVPVSNVRKEHFTTWALVLSQYLSEVRASVGTKLEDTVTFVVRYDQPETILNSWRIEWQGKQYDIVKLTPDTAKKQWTTIIGKPVANK
993159..993296                     hypothetical protein; LCAZH_1015                                                     N/A                 MVVLDNKNRLGNPEFRDWLNKVRNSDVQERTSKLWVRWEKASQKY
complement(993382..993522)         hypothetical protein; LCAZH_1016                                                     N/A                 MDALKAAFKFMVASTLIVGGVLVAGTVFAAKGIDNAGDKLQEKLHD
complement(993538..993786)         hypothetical protein; LCAZH_1017                                                     N/A                 MHFLWALIVGAIIGAIAGAITSKGKSMGWFANIIAGLVGSAIGEGLLGHWGPQLAGMALIPSIIGAIIVVAVVSFFVGRSKD
complement(994012..994143)         hypothetical protein; LCAZH_1018                                                     N/A                 MLALLAGATSRRILNKSAIGVELHVAGVMDRSSILLTSTYHYH
complement(994028..994389)         tRNA                                                                                 N/A                 GGGGGTGTAATGGTCTCGACATTGCTTTTCGCACATGCAGTGCACCTCGGAGGCTCGGCTCCGTCATCAACGGAACAGTTAATATAACTGCAAAGAACGAAAATTCTTACGCTTTAGCTGCTTAATAACCAGCTAGCGTGATCCTTCCGACTTCGCTCAAGGGTCGGGTCTGGGTCTCAAATGATTGAGCTACGGTTAATGTTGCCACCTGAGGCATTAACAAGAGACTAGTAGGTTAGCCGCCTTGTGTTAGCCTTGCTGGCTGGCGCGACATCGCGGCGAATTTTAAATAAGTCAGCTATAGGTGTAGAGCTGCATGTAGCAGGGGTGATGGACAGGAGTTCGATTCTCCTCACCTCCAC
994029..994041                     attR                                                                                 N/A                 TGGAGGTGAGGAG
994499..994894                     putative integral membrane protein; LCAZH_1019                                       N/A                 MILLIAGCMQLLMGILLAVFRPRHQSGFWGYTSYLAGVNAESFRLAQRWFCQALIITGALEAGAGWLIHFLAWDNFFIVWLFLAVMLFLPGFVYTETRLKHYLQAHDALPYDYVSPDDAPKPQRKKGFKDL
994910..995638                     PHAGE_Feldma_virus: putative hybrid sensor histdine kinase; LCAZH_1020; phage(gi197322490)     2e-06               MKLLMIEDNTSVAEMMAMFFQKEKWEVVNAYDGEEGLAKFKEAPDSFDIITLDLNLPKMDGMQVAKEIRKISQTVPLIMLTARDTESDQVLGLELGADDYVTKPFSPITLIARIKALHRRAEVGAEVGAEQTTSEPPDGFDVETDHFKLSTKTREAYLDGKQIEGLTPKEFDLLHTLSKSPKQVFSREQLLQLVWDYEYYGDERTVDAHIKKLRQKVEKVGPQIIQTVWGVGYKFDDSGLDR
995635..997110                     PHAGE_Ectoca_1: EsV-1-65; LCAZH_1021; phage(gi13242537)                              1e-17               MKMLYQQLIGFFSVIMVTLVIVSILFIRSTTNTVWENGFKQLEQYTDVLKNNAVDENTYVINARFIQNAEEILSDQHVHFVIYDANNVAKYPVSQKGQMPAIKASYWKKLKQGAAVAVPEMMTNPISGHAQSMTIYYQPVFLSEKLLFVIAAFAPVEQIQSSISKTEHNLLIAFVLSTLAAFIISYFIASYQVRRINQLRRATHQVAEGNYDVEVKIKSRSHDEVAELADDFRDMVTSLKASQQEIQRQEDRRRQFMADAAHEMRTPLTTINGLLEGLAYDAIPEESKGKSIELMRNETNRLIRLVNENLDYEKIRTNQILLSKQTFNARTDLDNIAEQLAQKSEEAGDKITIDAPADLPTYADHDRFVQILFNIVQNAVQFTKNGQITVKAKVGYHQTEFAISDTGIGMSKDQMKNIWERYYKADPSRKNTKYGESGLGMAIVHQLMGQHGGTIHVDSTLGKGTTFTLTFPDEATAPKQKQPGADQQTSS