gi|291297538|ref|NC_013947.1| Stackebrandtia nassauensis DSM 44728 chromosome, complete genome. [asmbl_id: NC_013947].6841557, gc%: 68.13% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 4504245..4504257 attL N/A GCCGTCGGCGGCG 4504415..4505935 PHAGE_Strept_R4: recombinase, serine integrase type; Snas_4207; phage(gi414090037) 1e-19 MDKWLALYCRASQDKRGFRESVGDQETWGRAYGAKHFPDLPIKVYIDNDLSAADPTVFRPDFERLREDVRMGHVAQIWSVEQYRLVRQEVEWFSFAAELVEADIIRLHTDRDGVILVDDDVAGIKAVLGGGEVRRQKKRLKSRQDAQAAKGWPAGSRPFGYVHARVKGERTYKVVPEQAEALRWAAGAVVDGWSLTNIAAELTARGFEGAHRKHVKDEHGDDVLDEDGNPVTLPTVINAASVKRMVSNPSVAGWRVHRGQISGRGNWEPILTESLWQQVRTKLSAPRTVRTKAGKQYPVKTTRPGGTARRYELSGGTITCGKCEAPLVGSLKQLRNKKGVRSVPYYFCHPMNGGRSCMGIMAKLTEKYVAARLIKELNKPAVKAALAKDNHAEKRDELTAELVRIDGQRPKLAKAWAADALSDAEWLAAREELDEREAAARAELVALPAPTRRVDPALIADGWDEMTLDERREIISMFVENVTILPARPGLQRFDSDRVKIKWREL 4506770..4507000 hypothetical protein; Snas_4208 N/A MGKRSRVHINVEAVKAALTAQGAVGVCAQARRIGITREAWGRICAGKLKTTPRTETLARIVAATGLNYSSVIAHND 4507078..4507425 PHAGE_Mycoba_Corndog: gp13; Snas_4209; phage(gi29566297) 9e-06 MPTVVPPTQNPPTDPAPVALDDCGALVSSLRHAEAMAAQWSDAAAELRRVLIERLGDAELGTINGHPAVRHTTYRDTRVSTKMLRELAPADLIERCTTTTTRRRFTLVDTDSGVA 4507422..4508180 PHAGE_Rhodoc_REQ1: hypothetical protein; Snas_4210; phage(gi372450070) 2e-47 MNAVAFAAPEARIALSIDLARVIREYSDSRPRSRQVNIGPSEIGVECLRRLGYKALGYAASNGGGDPLPPFIGTAVHAELAAAFEADNERLGRVRWLVEHRVTVRGSIRGTLDLYDHDTRTVIDHKIVGPSTLQKTRAGGPSEQYRAQVHLYGYGLSAEMPVERVAIAYFPRAGHLDGRIIWAEPFDPAVAETALDRLASVIHLAGVLQVDDHPDRWAHVPATPGPGCAFCPFFNAQGVTDADTASCPGTST 4508225..4508764 PHAGE_Tsukam_TPA2: hypothetical protein; Snas_4211; phage(gi326425074) 6e-06 MSQFAPPSEGIKPADLLGHLVIARPLRYEPEVTTIHGVKDAVAVDVADVDTGEIYTECLWFNGVIVGRLRRHLGEIVLGHIIEGTPRPGQKPPLLFNYANEDAAAVARGQAFLKAHPEFATTDTPAPTASTPAPVPAPKPVAAPAASPAAPAGISPEVLAALPAESRALIEQLSAAQAA 4508868..4509782 PHAGE_Rhizob_3: p101; Snas_4212; phage(gi195546631) 9e-13 MDDGSRILATAELTRHALDYAARGWPVFMLGAGKVPLRLCRPCREADGDHDMEACPCLTCHGFYAASTDPERVVAMVTGHPRGVLALRTGASSGVVVVDVDPRNDGTHTFVRLLADGVLPATVTANTGSRGLHLYYAHPGGTVKSGGNRLGPGVDVKADGAYVVLPPSTVNGKAYTWRPGTDPTSLELSPIGHKLAELLAPAEPSAPVFRPAPMVSASASAFAAPSNARGRLAGLVSVVLSAPEGNRNDVLNWAAYKAADVIMTGAAPAEAVVAALADAAAHIGLAPAETRGTIRSGLRAGGVA 4509779..4510873 PHAGE_Mycoba_Omega: gp153; Snas_4213; phage(gi29566888) 1e-62 MTTLDGAGEPVDPQELARLIVARHIGDVPELAAEADLHAHLKQGGAWVLDVPDRPSAVWGSGDEVLWASGEALMVCGGQGSGKTTLAHQLIRARLGLDNSLLGFPVQPGNRRVLYLGMDRPQQAARAMRRIMGETDRRILDAHLRVWPGPPPADVGKHPNTLVDLATEADADTIVVDSLKDAAVGLVDDVVGATYNRARQQALAAGIEILELHHNRKTGSSGGTPDSISDIYGSTWLTSGAGSVLMLSSEPGDAIVEARHLKQPAADCGPLRIVHDHASGRSSLDDPVDLVELAERCDGITAADAACRLFESATPTRNQTEKARRKLDRLVETGALRRTGGGRGRGKQAAYLPVVAASGWETDA 4511109..4511441 PHAGE_Rhodoc_REQ1: hypothetical protein; Snas_4214; phage(gi372450035) 2e-06 MSNTRPVSTPAQARLCRCGAVVLEGLAEGVPVRADAAALNADGELDALAAGRRSYVLNRRELVLRDTTRLNLPGPVVADHRCGQPVPAAHRAPPAPSATTRRPRPLDPPY 4511471..4512025 PHAGE_Rhodoc_REQ3: hypothetical protein; Snas_4215; phage(gi372449990) 3e-11 MTTQTRKRRGRATEQAVAAAMRADGWPYAEPVGAGRQGSDITGTPGLSLEVKARRGLNLGAWLSQAVRQADDGEVPILVVRLDGQGPASVDEWPSVVPFAVLRRLLRLAGYGNPTPPPPGLDNPVADPAREARGTGETVDYWLGTPGGGDWLGCMACQASAAGRDPAGLAHAPRCPHAEQGAAA 4512712..4513701 PHAGE_Mycoba_Tweety: gp72; Snas_4216; phage(gi157311261) 6e-56 MSLQQDTLRTRPQWRVFSRRVGGELVPRIGSLCSGIGALDDAVAAVTGAELAWVADTDPDAARVLTHRHPHAPNLGDIRTAPWEDAEPVDILVAGVPCQPVSKAGKRTGVADARWLWPHAARAVRDLRPALIVLENVAALRTRGLGDILTDLAALGYDARWLCLRACELGAPHQRDRMFLAAATHPQRHPRSQDHPNRFAAAGSGRTPSHPASQRRHQRLTPPTGLQRGRDLAVTGAETWGKYAPAIARWEHLTARPAPAPTAPTGRGEARRLSPRFVEWMMGINSGHVTDVEGISRTAQLRLLGNSVVPAQAEAAVRLLLDDTLWPRP 4513686..4514003 PHAGE_Strept_R4: putative HNH endonuclease; Snas_4217; phage(gi414089986) 1e-21 MAETVTAWHGSNRAAQLPGDWPRRRAIVLERDGYRCTRIRADDTRCPEPATDVDHIKPGNNHELDNLTALCQWHHQKKSAREGGRAAWMNRPPKKRPAEKHPGAL 4514708..4515529 PHAGE_Thermu_77: phosphoadenosine phosphosulfate reductase; Snas_4218; phage(gi257136436) 9e-17 MSPLRVIAYGGGVQSTALLVLAASRRIDFVTFLFSNVGNDSEHPATLDYVTRVAKPFAERHGLALVELERVRRDGTTETLYRRLTREGSRSLPIPVRMSNGAPGTRSCTADFKIKVLGRWLKANGATKDNPATVGIGISLDEMHRVNRRRALAYENPVYPLLEHSPPLRRADCLRIIAEAGLPVPGKSACYFCPFHTRDAWATMARDEPDLFARACHLETILNHRRATLGRDPVYLTRYARPLGEAITPAQDTLAGLADLDDDATCDNGACWT complement(4515526..4515777) hypothetical protein; Snas_4219 N/A MGVTIPAIVFVGLLTLIVLCAMRGTTPSERVEILKAAASLAREWRHPILSLRRLPNVSTNGQAPVVDNGLPQITDGVNDKSSI 4516176..4516607 PHAGE_Rhodoc_RGL3: hypothetical protein; Snas_4220; phage(gi372449797) 8e-25 MGTRGPVPKRSDQRRRRNLDAQVDTAPALAEPVAAPSLDFPAHPLAEDWYRSLSESGQAQYFEPSDWQAARLVAFDLTRHLNSGRASSQMLAALWSAMADLLSTEAARRRVRVEIERVADDGDQNVNGVVAVLDDYRRSIGAA 4516642..4518222 PHAGE_Strept_R4: putative terminase; Snas_4221; phage(gi414089990) 4e-118 MTGPRGLPERTLGWEVLAWTAAYLHQPDGPYAGNPWRATPEQVRHVLWWYAIDEAGRFLYRRSILRRSKGWGKDPVAAVLSLVELLGPCRYGGTNAQGQPVAVPHPSPWVQIAATSEAQTVNTMSLILSMLEYGSLVDDYSLDVGKTLIYTPRGRLHAVTSSPRSLEGPRPSYVVLGEPQNWLPSNGGQAMSEVIRRNLGKSRDGAARSTEIGNAHLPGEDSVAESSYEAWLSMVEGRSRDTGILYDSREAPPDTDMSDPESLRAGLRAAYGDSHWVDLDRVMGEIWDPATPPSVSRRYYLNHVTAAEDAWCAAHEWDSCETTDRIQPGDTVTIGFDGSVSDDSTAIVLCRVDDGLVDLAAVWEKPDGPAGDDWRVPRDQVDEMVDHLIATYDVAADYSDVAYWESYIDTWSIRYADVVRHKASPKSLFGWDMRSHAKEFVLRGAEATLSAITDGTLKHTGNPILRRHVLNARRRPNRWGLSFGKESRTSSRKVDAVAAMCLARIARADVLATGAGRQRTGEVWAL 4518250..4518996 alpha/beta hydrolase fold protein; Snas_4222 N/A MNSTNTPTLVLIHGAWHDGRAWDDTAEHLRAQGYEVHTPTVAGHGPDGDRTTTLDGAVDSIVEYIEENDLTNVALVGHSLGGVYISQAAPRIADRLSRLVFLVAFVLSDGESLYDVLPEALRDNLLNSTNDDGVIPPDYAFVRNGFMSTADEAATREVFAELSPQGDTTFSVRVDQSGFETLVADGEVGISYIDVSGDVLLGPDGWYSAFGERLGAGVRVIRVAGESHDLMHTDPAECAEAIIAAARD 4519538..4520950 PHAGE_Strept_R4: putative portal; Snas_4223; phage(gi414089991) 2e-96 MPTPTDTAVELLARLSDETERLDRIDKYLRGEHDGPYTPRKASREYKILAQRSVTNLLPLVVNGLAQSLYVDGYRSGDTDEPASAWRHWQHNGLDARQSAIHRAALSYGRAYVVVVPGKDAEGAEAVPTVRGYSPRRMIAAYADDDDEWPEYAVRWASATVEGKSGRRVWFYDDETVHVFTSTSADGGDLAPEDSYEHGAGVTPVVEFRHLPDLEGRALGEVEPLIALQDRANQSTFDLLVAQTFSSFKIRTVSGMAPKFDDDGNPVPLPVDAARLLMATDPDTKFSQLDETDLRPLLDSIDAAVRHMAVVSQTPPSDLLGQLVNLSAEAITAARDGANRRRAETQAVFGECWEKVLRLCELVLGGDADTSAQVSWRDMEGRSLAQIADALGKLAQTLEVPVEALWPRIPGVTQTDIEAWQRMRATDRAADPLSKLADHVNQTAGGDGGLDNVINAADVAASAATGAASG 4520985..4522508 PHAGE_Strept_SV1: putative head assembly protein; Snas_4224; phage(gi410491724) 7e-22 MLDPRRLDATTPLWLPVAEQLVDVYRKTSAEAGLDYYQAHRAAKGIHAPLPDLAAETGNRDAVRTSLIVCGPVAIKHATGQGATLAEAVHIGETRAEAAAARHVLNGGRDSVHAAVDADAECLGFVRVTDADPCWLCAMQASRGPVFLSEVSAVLRRETTPEYAAFLRANPDGGRYRGKKFTGRRVPYHDGCQCTAEPLYSYDAPWPGTGREFDALWQDATKGRTGADARRAFRRAVAAASPTQSADARRRKRADARRAEAEQHPPLPEPDTDRAGTRSDVPPEEPAPAPEPDAAPAETGTGPGPLGDLSRLSDDELFALFGEHAADENAVAAITAEMDRRDVPDGGDVAQGVEELTPEQRRVEELVSQGWDWQDAYAEAHGVDADELDRQARAAEVDAHRYTGETRDEAVRRMYDEYVQVSYVAAEDATAGHMLSKAGRAADVNPLSLFSGTTARARKYASEDLLRWWSEHGRMTFTEYRAQVLGRETDRAAAAVTAMQSNGRDFI 4522505..4522690 hypothetical protein; Snas_4225 N/A MTPTDTQRAQAIRAARFAAARGLPITACPYPISGSASLRVLAVVFVREYARLRPGRIDHTA 4522773..4523435 PHAGE_Cercop_2: envelope glycoprotein G; Snas_4226; phage(gi56694786) 2e-08 MPTTPGTTPEDAATGTGATGEESGTLAEVPPEPPAAASGTTPAATGTTAGDSGTSGDAPPPPAPAPADSPPEAPPWERTGQPFDAETAWKLITNLRAEVARGKAGAPTGPGGTDELAQRVTSLEQQLAEERAAARARIGEQHQMPEPVVALLGDGDGKTLAARAQALIDWAHTLNRPAPSRGARRRPVAELRSGTTPEQPPEDTDPARLAAQVAARRPHY 4523475..4524443 PHAGE_Strept_R4: putative major capsid; Snas_4227; phage(gi414089994) 2e-37 MNNQFLKPSVIAATALGLLERDIVLPGLVWRDAVESFDGADDDTVSIRVPARTKAQRRRMRVEPRGKIVAKKLKETKVDVTLTEHVISAIDVTDEEMTLDITNFGAKILAPQTRAIAEDLENQIAETMAAAPYETELTLDVAHPEDTFVDARRALNVESVPVADRVAVVGADVEAAILKADGLTRVDKSGDNTALRNAEIGKLRQFPVYLSNAIDPGTAYLFHRTAYVFALRAPIVPDGAPFGQSQSYGDLAMTWVRDYDSDYMQDRSIVHTFSGTAFVPDPPRDKTPETTDPKKFVRAVKITMPDTVALPAPKPGRKKAAV 4524440..4524856 PHAGE_Strept_R4: hypothetical protein; Snas_4228; phage(gi414089995) 2e-05 MTASASPPLASIDALETLLAEPLVGRRRQRAGAVLAGVSAEVRAVAGRRWTNGAPDLAVSITLKAAERAIVNPQGLSAENLGDYGRRFGGSGPAGVYLTEGEVDALVKLTEASGVVSVPVERDVTLGGTPVSDPAVRM 4524861..4525232 PHAGE_Mycoba_Peaches: gp19; Snas_4229; phage(gi282598625) 2e-05 MLYPHTPIVYPSEYRSDSDGNAVRWPSLEGVPVPANIQPHASAVTTVEAGKGGPSQQTRVEAVAYLSGTFCPALDAYAALDWDGWRWVMVGDPIDHQSPDGTLRMWRAEIRRDRALADAPRHG 4525213..4525512 hypothetical protein; Snas_4230 N/A MPRVTVKDDRRTRHRIARSAVVDAALASVARDVLTAATADAPRGKSRDYVESLEIAKGKVDYHVNATAEHSAAVEFGHHNESTYVEGQHVLARALDAVT 4525532..4525933 hypothetical protein; Snas_4231 N/A MPLPDPVTAVVDIIRTAIPEAVVGTLVPDQLAEHLPYIHISQTGGPITSASARGGLHREAARLVISVWAAPDPAAARGLARRVLAALLAVRAQRVSGGVLVRTHVEAAPAFLPDDHAPAGVFRYVATVTTHIH 4525946..4526548 PHAGE_Rhodoc_RGL3: major tail protein; Snas_4232; phage(gi372449745) 3e-14 MLTDGATIIPGKGYIYTAEPSTPRPEYGAEAPAPWVDLGHTSEEGLTISLEVEKTVKKTWRNRVGLRTTVDEVTFELTWMGLQFDTPNLMAYFGGGEVPEPGVFGVTGDFDKPYERALFIRLEDGDAEVDLYLSKVSLGPGDEAEISPEEFAPLPIKAVVLDDADATYLLELMAPHIGYPDKPVAVSRKAKTRKTAKQDA 4526669..4527082 hypothetical protein; Snas_4233 N/A MSDVDAVAAEATTDPNSPVLETDMHGRRWVFYRPDIRPAALRRYARLADKVTGGGEVADADAIELAAVAEDMLRSGLPDAETREAFDEAPFNGTDITALSEEYFEALGATVGESSASPAPSPTTVARSRPTSKRRTE 4527169..4527390 PHAGE_Strept_R4: putative tail chaperone; Snas_4234; phage(gi414090001) 3e-05 MALRGSEHDGWDLTAHLLAALIDAANTTTYAVAQVHSKKRLAKPEPVPRPGATTKPTRTVTVAQLAKRVRQHR 4527430..4530699 PHAGE_Strept_6: minor tail protein; Snas_4235; phage(gi93007453) 6e-54 MVLSAGAVSVRVKPDLTKFAAELKAFLVAASRDVVHIGADLDAGKLATQVKAAVTRAGAGRGVEVPVTADTTKLAAAVRSGTPSGKTSVAVDADTSTALSQVARLKSQLDDLSRRHIELSASGDTAGAEHLVAQIRDAAAAAQEIDLSHIKGAALGVDTKAARAAAEKLRTDLARLSGETFRIDVTANAGDVERVRAELHTLAADASDIDIPVAADTSKLAAQVRSGLAAADGGRVRVPVAADAGQLAGQVRRAAALAQQGTRITVPVGANTKGIGGSLAGLSGIGGALAGIGKVAAIGTSLAAAAGGAAQLAAALAPVAGALAALPAFALGAAGAFAVLKLGLSGVGAALSGDSAAFAQLAPSAQAAVTAIRGLSPQFERLKTSIQGNLFAGLDKQITRVADVLLPKLQQRLPAIATAFNGLAKGVAGGLSSDGFTSGLDAALSHTATGIAGLAKGMRPLFSGLGQVIGAFAPSLTAAGQAAGGLAARFGEFISKAAETGQLASFVDGVKTALSQVGGILSNLGSVVASVFSAASSSGGGLLATLETITGAAREFFSSLEGQEALSGFFGGIQSVVRAVLPTLQNLASGIGSVLGPAVGQIATILGPALETLSGSLVDGVAKLLPGLMPVAEALASIVTAAAPLLGVAGQLGAILGGILGSALSMVASLFQALVPPAVQIAQILLASLMPAWRSIESALQTVIAAVLPVIQAFLSVNQALAPILGLIVRVAAAILSGLVKGLIALITPSLTITKIFVGALAKGIATVYGWLKEKLGPAAAWLASVWNEKVSPALSKVSAWLSEKFSAAAASAWSWIKEKLAPLGQKLATIWSEKLAPAIQKVGLWFREKFVPAAQQVWTWIQEKVIPVVSKLVRWFVSKLVPGIERVVEWLVDLAGWFLDLAVDIGTAVGKAIRFWGRFIAFIKALPGKVIGFLKGLPAKFVQIGKNIVSGIVRGIKQAAGRIKDAAVGAAKSAYEGAKDFLGINSPSRLMAWLGSQMGAGVEVGLDGSVGDVVSASRGLARAAYDPWRGFTPHPKSRTDTDGPGGVNVSVRIGEREVADMVVDAVRARPEAVASTVAHGTRLSNLRR 4531328..4531340 attR N/A GCCGTCGGCGGCG