gi|283782520|ref|NC_013721.1|  Gardnerella vaginalis 409-05 chromosome, complete genome. [asmbl_id: NC_013721].1617545, gc%: 42.02%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
976453..976465                     attL                                                                                 N/A                 CTTCTGCAGCAGC
991036..993360                     PHAGE_Lactob_JCL1032: putative DNA primase; HMPREF0424_0874; phage(gi418489153)      3e-72               MDLEKLPKALKNKNIFCSWKYEQQENGRLTKPPYNPITGKKAATDNLSDFTSLDDAMKVKDQYDGIGIKLVDNLLGIDLDHCIDNGIIKDWAKEIIAHFKHAYIEYSPSKHGFHILLLFNGAYDKKSYYIKHGDIEVYSALATNRYLTVTGDVYQEGELLEDDEAIMWLLDTYMKRNINTHEKENNACTRSYLSDTSVIEKAGNAINGAKFTALWHGDISAYPSHSEADAALVSILAFYCGGNKEQIDRLFRKSALFRPKWDEHRGADTYGNTTIQKAVSKCHTFYEPFHNASAEEDFDDLLSKLQELKPDENIRYRNGDLGNGRLFADIFQNILHYVPERKMWFIFDGVRWTCDIGTLKTMELCKDLALSLIRYAGVIKDERTRSMLVEYWNKWSSRRNREIYIKEAQSVYPISMEAFDKNIYLFNCQNGTLDLQHGVFRKHLATDLITKVSPVFYDPKARSERFRQFVDEIMSGDCEKALYLQKSLGYALSGDTRYECMFFLFGESTRNGKGTLMESVLSVMGDYGKAVRAETIALKKNPNSSQPTEDVARLAGVRFANISEPSRGLFLNSAQVKYMTGSDTLNARFLHENSFDFKPQFKLYVNTNYLPVISDMTVFSSDRMQIIPFNRHFEAWEQDKTLKAEFSKKEVQSAILNWLLEGFTHLRDEGFKPPNSVLDAIFSYAHDSDKMAQFAEDVLVKDQSSEIRTAVVYDHYKKWCIDNGCFSENSRNFNQELRKFAEVVRKRPKTGGEKTTLLKGYRLKSEFSDFLSGN
993779..994726                     PHAGE_Azospi_Cd: Phage major capsid protein; HMPREF0424_0875; phage(gi168495136)     3e-18               MINRDIEKEMKLASQDYHNTFWNVLRDANGNANNIAGKLRHIHTGAYDLPTSSLAKLEAKLANKSNLRKLCTVVKAHSQSSKLFIYEGTPFTKWMKDYDANIITHMPIKDGFKRIDVTDYTLVNLIRLGTDFTADLDFDIEEFITSELTKQFTLSESEAFINGDGITKPTGILSDTSGAEVAVQAKEISADTIKHLFFSLDSKYRENATWLMNDETALYLQTLKDTTGAYILPDFDGNLMGRPVVIDNAMPSSQKGAKVIAFGDFSNYWIIERHNPTIKVLNEIFSLIDQIGYLSFEYLDGKLVHPEAIKVLQLS
994984..996636                     PHAGE_Bacill_phBC6A51: Site-specific recombinase; HMPREF0424_0876; phage(gi31415812)     3e-25               MNKLNRQPSYTLDNVGKITALYCRLSKDDELQGDSNSIINQKSMLKKYAEDNHFNNLMFFVDDGYSGTNFQRPDWLKLTALIDEGKIGTIIVKDMSRLGRDYLQVGMYTEMVFPNADIRFIAINNGVDSNNQSDNDMTPFINIFNEFYAKDTSRKIKAVFKAKGQSGKPLCINPPYGYLKDPEDKNHWIVDEEAASVVREIFRLCVNGYGPSQIANELIKRNIPTPSEHFFSLGIKIPSAKSEIKGVWNQKTISNMLEKQEYLGHTVNFKTRKKSYKCKKTLLNPKEDWLIFKNTHEAIIDQETFDIVQRIRNGRRVRTNLGEMPVLSGMLFCADCGNKLYQVRGKGWSHDKEYFVCATYRKQKGKCSSHQIRNIQIEAILLHELRMITSFAKQHEEEFVGLVMKKSEKELTQKLKSSNRELEQAKARISKLDTIVQHLYEDNLDGKISDERFKSMSESYDKEQAELKSKIESLEAFISKAQEECLNVDSFLKLVRQYTDIQELNAEIIRTFVDKIYVEKSEKVAGTRTKKQTIWIQWNYIGAVDIPLHK
complement(996728..996804)         tRNA                                                                                 N/A                 GCGCCAGTAGCCCAACGGATTAGAGCATCTGACTACGGATCAGAAGGTTGCAGGTTCGAATCCTGTCTGGCGCACAA
complement(996958..997632)         PHAGE_Lactob_JCL1032: putative ClpP protease; HMPREF0424_0878; phage(gi418489116)     7e-11               MASEEAKFVARAERLAGFGGVTSAQRITNRYVLPQFGEQTPYGMKTQDPYTKLFEDRIIFMGVQVDDTSADDIMAQLLVLESMDSDRDVMMYINSPGGSMTAMTAIYDTMQYINPDVQTVCLGQAASAAAIILAAGAAGKRMILPNARVLIHQPAMGQDFGKATEIELQAKEMLRLRSWLESTLAKHTGQDIERIRKDIEVDTILTAPEAKAYGMVDEVLERRA
complement(997635..998246)         PHAGE_Entero_mEp213: head maturation protease; HMPREF0424_0879; phage(gi428782594)     5e-15               MTELFTASPVMEQAEAPTSTDPIFNRLLKDRIIWLGSEVKDENANVICAQMLMLAAEDPKKDIWLYINSPGGSITAGMAIYDTMQLIEPDVATIAVGMAASMGQFLLSSGTPGKRYITSHARVLMHQPSGGVGGTATDVRINAELIMDMKKTLSELTAKQTGHTVEEIYRDNEYDHWFTAQQALEYGFVDKIVTTPASMRGEE
998461..999249                     PHAGE_Helico_2: hypothetical protein; HMPREF0424_0880; phage(gi370703030)            2e-13               MDPNQLPDNNYSPAPMPNNEYPNNGYQNNTYPNNVNPNNGYPNNGYENNEYQNNVYPNNGYQNNNYPNNVNLNNGYQPNVYQNNQQPVNNYPANAYPNATNTSAHKSKYTWLIVVIVVAIVAVGGYVISKPHYNSTNLKPHYNCSAPKSANIEEYVHCHSEEAKKLTNGFNDATSSSPFNITFATKGDQLNINAKFKKHLSDLEITALKTGMQTYGDSLSNLMPQSASDEMKEKIIAPVRIHFSFSNDDGTFIADKEFSFNN
1000956..1000968                   attR                                                                                 N/A                 CTTCTGCAGCAGC