gi|260060589|ref|NC_013222.1| Robiginitalea biformata HTCC2501 chromosome, complete genome. [asmbl_id: NC_013222].3530383, gc%: 55.29% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 3098301..3098313 attL N/A TTTCTCTTTACCG complement(3109864..3110604) PHAGE_Bacill_B4: hypothetical protein; RB2501_01351; phage(gi410493430) 5e-06 MSGVKADALAQAISDEQEKELELPEGRFLSKEQEEQLLDNHGKRKYDEGKSKALKDVFEGKDKDSFLEEFKKSVLDEAKLEPSKKIAEKEQALKALQEKYNADKGEWESKTSGLESQITKMRTLTEIAKHLPAELPAGLTREDATLIVSNNFELKDGEVYQNGEVLRDDLQNPMKFDQVIKDFSEKRGWNAKPTGRGPQPTYQGGTPKTYDDFVQYCESKKIQVGSAEANKLMADYAKDNPEFFND complement(3111008..3111298) hypothetical protein; RB2501_01356 N/A MSYSKYDRLEKNRRGEWEKVRTVTITEENAEVLNMDSKRTGIKYEPVETKKEEFNVKTAKLDDLKAYAEENSIDLGEATKKDDVKAIVSEWIESNR complement(3111285..3112919) PHAGE_Bacter_B124_14: putative capsid protein, major protein 3 (MP3); RB2501_01361; phage(gi374671641) 9e-05 MELLPFQVKEIIESGTPDWLILARKKAKEITMHLTGEGAKDYLEKLDNYENEAQRQLKEKLLKSNKSLISFLLRPADQVFSANGGSIQYNASDSQITRIKTEVSDVSEGLNIKDFLRKRVFKKYVADPNGLIMVDIDRDGMLQTSFYGTEQVYWYARRGNQVEAIIFEPFKSEDQNDDRQFFRVIDDKSDNIYAKNGDSIELLEDEMLPNYFGFVPAQVVGDIYDLNKPIFVSFLDEVLEDAKDRLHDVNTHLVHKLAHGYAKYWSYPENCTTCGGTGELKRNCADGDEQTTETYACYTCNGSGTKTRKDASDMMLLPIPREGENKLDPPAGYVNPSIEIWKQYKEDIKEIGDYMYECLWGSYFSRDPQAEKTATETFVNSQIKNARRKDLSKNFGRLHKFILDCYGKIALSSPSYESSVSYGTKYNDESPEVLLKTIIDATDKQISSAIIGDLQMKYYQAEYANDPIELTKRLKMLKTDPFPDLTAQEVRELGITGEELLMKIYHSQWALTLDNAKIMLMDVSELTDDLRQYVQQKQLSNELQ complement(3113122..3113451) hypothetical protein; RB2501_01370 N/A MKNRLENKLSLLLEEFPDMQCYLAALLLQSEFGGEILYNVDHCVLRVYCPDSGTVLYADTYNGVSDEPPGPLHSYQPMPMLKLKSIYGWEEQKELIRAAMQESKTPPHF complement(3113448..3114893) PHAGE_Clostr_phi8074_B1: putative terminase large subunit; RB2501_01375; phage(gi431810360) 1e-11 MQTSLEHKLRRYRQLKARLKILELHESLADPGPDTSPNYKLLHDALNSQDWGYNEKGQPYLKSGYAGVVLEGSSRSRKTWSGIDFIIWLATDHHKEDGCTINIYRETYNEFKTTLYDDFKRRLDDFDLPNPFHDAKEVKSFKIGKSRIFFLGDGKHGGGCDYAFFNEIMMQRREVFDQVEMRCRIFWWCDYNPSFTDHWVFDSVVPRSDTAFLRTTFKDNPFISPSELNKILSYEPWEPGTYQVTEEGVFYKGKPITETNQPPPHIRNVEQGTADEFNWKVYGLGLRGAMKGTIFPNITWIDAFPNMDYIYANDFGFTADPNALVRYSEDANNIYIEPLIYKPIETPDELAAAFEALGVEKRKPIPCDSSDKYTGENKGTVEMVQGLQDRGYRNAFKVSKKKGIMFWILSMKKKKIHVVKNHLFKEVKKEQENYKFKEVNGILINQPIDGYDHIFTAGRYGHMAWNDRPRKALGSQARGRV complement(3114877..3115404) PHAGE_Entero_IME10: terminase small subunit; RB2501_01380; phage(gi422934279) 2e-23 MAAPVGNQYYLLRSKDGRDRIFDSPEDMAEQINEYFQWCLLNPLMEAQVIKGRVIEEDERDGEVVKVTKNHEMVEVPKMRPFTLEGLCNYIDIGVSTFKDYEKRKDFSWVTTRARQIIDNQQFEGAASGFLNPSIIARKLGLADHQKVGRDDDAMTAEELRQELAQIKKEIADES complement(3115404..3115523) hypothetical protein; RB2501_01385 N/A MGLQERVDQGWDYVDSIPMSNLDNPMMRQVIIIWKKNIL complement(3115578..3115769) hypothetical protein; RB2501_01390 N/A MRWPWSKPEPKFYPVLDLDPTKIRLRLTEHEADAFKRICEKEFRRPEDQARMIISDYIKDYNG complement(3115772..3116125) hypothetical protein; RB2501_01395 N/A MTRDEIATQVAGAMASTAVDADWIAERAYDIADALLKARGPQVEHFPGLDVSVPENPKAQRPKKKRRSNPNALKQHLTHEWQDLDTLRKSAGLTYALILINKMTLLISCKSNKMLYF complement(3116122..3116817) PHAGE_Pseudo_F116: DNA adenine methyltransferase; RB2501_01400; phage(gi56692911) 3e-67 MLQKSRSYSEVYNDLDGEVVNLFRVVRDCGRDLLDVLRMTPFSRDEFNLSYNTSVDPIEQARRTVIRSFMGFASGLQSHQRTGFRSCSNRSGTTPARDWVNYPDALEGIIERLQGVVIENRDALDVISQHDTPDTLHYIDPPYVLNTRFKGQSTRIYAEEMMDQDHENLCQAIQGLQGAVVVSGYDNEIYNDLLTGWHKYYRKAFADGAKARMEVLWTNRMKPNLQTAIAL complement(3117170..3117478) hypothetical protein; RB2501_01405 N/A MENRVEYYPEAVQVGEGYLLPSLHRANTWVFITKTGIESECVIETKDDGNKQIKWKDFNLEYQMRQRIRQVIARDANHLISEWPEGGSKKTPVEEKAGSQKT complement(3117463..3117717) PHAGE_Persic_P12024L: VRR-NUC domain protein; RB2501_01410; phage(gi399528513) 2e-14 MVHNSASSRINGARLKTMGMVPGVSDMIYLKPGGRPLLIEIKTMRGTQSPKQVAWQARVVANGYRYYVVRSLDEMKEICGWKTG complement(3117822..3119312) PHAGE_Persic_P12024L: putative helicase; RB2501_01415; phage(gi399528509) 3e-91 MLRSYQKDLISRLRLAIRQGNRRIIAVLPTGGGKTFTFTHIVKGAVDKGRRVLILTDRIELLRQAGGALQVYGLDPIEIKAGRKPYLGGVLYTAMVETLARRVKKKDYQHFLQKMQVVIIDEAHMRSFDKLFPYFSADARVLGFTATPRRMGRKNQLGEYYHHLEVGVEIEYLVDNGFLAEPNYYGVESDLSGVRTVRGEYDANEVADRFSKTKLYRGVVENWKRISPGEKTLVFASNIASSQELITEFTQQGVDARHLDATVSDLDRRNTLAWFDRTPGAVLCNVGILTKGFDQPDIRTVILYRATKSVPLYLQMCGRGSRMAHGKTSFNILDFGGNIARHGFWHDVRPWSLEVMPMQDRQIGEAVLKNCKQCEAFIPTATVICPHCGYEDVKEKEEQQFARLQLLDPRELRRRAEVMTMEGKIEMAKKGLVKPFWVIHQLGRSGGGEDAWEEVKRFVSGMGWSPYWFSYNYERFWWKDHYLEEVSNGSRMIKVG complement(3119306..3119473) hypothetical protein; RB2501_01420 N/A MLEYMIKKLEEQLSEFENTALYPFELEFLEDIKKVIEVHRGGKEKWINDPKRKPC complement(3119734..3121998) PHAGE_Persic_P12024L: DNA primase domain protein; RB2501_01425; phage(gi399528503) 4e-157 MTKISYFNSGEFSKVGGDVELDDYLEYVRDGRWQDKVLAVRNGKSDKTGVPSVTVSGRFEDRRRRDNLAEHSGIIGIDLDAEDNADLLANRARLEQDPHCYACHTSIRGFGLVWYVKVSPEKHLEAFQAIERYLANQYGVVVDPSGKDVSRLRFISYDPHLYLNRGSKKWSKYLNKKQREFREAPARAIAYHDEDIRHILEQIQNRGVNIAEDYHSWLHTSFALASEFGEGGRDYFHIVSAQSSKYERGKCDKQYDIALRRDHTGGVGIGTFFYYCQQAGIETRTPATIEAEIYYAQRLKSEPGIDRKEAIRSTEEYLQMRGVEPERTREALEKIKDIPVHQFQTVQVNDKVLELETFIKSLGLRFNEITRYYESGEGEQLEDRDYNSLYRKAMHAVGFNVSQSKLFALMDSDLITSYNPFTSFFRDNKHLKPTGCLEELLACFDYEKPDLDGVALTEDEEAADYLEVFLTRWLLGIISAMNGTFSLLVLVLTGEQGTGKTKFFRNLLPESLSSYQTENKLNKENDIAPLMTKKLIICDDEFSGKNKRQADEFKELVSKEKFSVRKPYGKVWEDLTRYAVLCGTSNDDRVLYDMTGNRRIIPVKIRSIDHDRMAEIDKTELFMELYWMWRDLGDKWMLGKKERIYLNKCTGIHESENFEMDMVQKYFEPTDSLGGNCIPRTTTEIKIYLDEKTKERLIIHKLGAALKALGFEKRSVRDGGTTSKKWLVIEKYTSAPNVVDESPTTNLDSQTLDF complement(3122017..3122751) PHAGE_Pelagi_HTVC008M: exonuclease; RB2501_01430; phage(gi460042629) 1e-12 MNRIDVLDERFYQVGDEYYPSVTTVLSAYPKGYGFQEWLKNVGGEAERILREAADRGSNVHNAIEQILLGRELQWITEGKQHYSLDEWQMICRFMEFYQDYIQSGEQVATETQLFSKKMKLGGTCDMVAKINGETWMIDFKTSNGLYKTHEIQLAAYKEMWDEHNSPKIDRYGILWLNSNHRTKRQFQGVDWQLKEFTDSHEYNLQLYYHTRALWDCENPNYAPKNLSYPNTISIQPQEQLAEV complement(3122841..3123455) hypothetical protein; RB2501_01435 N/A MGKVVKSLGKEEPAEMEGVTTRINKNGDRVYELQLDYLRGFIKGADLKLPPDEHPEYGKTMEFRIEAENGAQCVLQVPFDSAYGRGFLYAAPGIELDSPVEFEPYQYFSKKKGRDATGLSIIQHGEQLPWAYGTKKNPGGVPPLEKVTFKGKETWDNTKQLAFLEKKFLEFCSLFSDGDQEQPDPQPQAAPEPAPATAGPQDDF complement(3123862..3124074) hypothetical protein; RB2501_01440 N/A MWDEMTSKTRKQVVEASATACGVDQKTFKNVYLWGERMPEEKQPIVVEIFDDALAEQEKSSRRARKAVQI complement(3124539..3124778) hypothetical protein; RB2501_01445 N/A MNSEYQNPKWNLRAALFFFVLTLAMLIAASCEKPTMDEYLYGANNKIQRKTENCYIDLNTDCSKLETPCKEVCELLKGE complement(3124906..3125034) hypothetical protein; RB2501_01450 N/A MKQPIYTREEYIADEKKCIEAERYDRAYKRMLEKMDEEYPRI complement(3125031..3125168) hypothetical protein; RB2501_01455 N/A MKDQHQTLAELFANIGYAFAEICDDFADATGKPTKTIDEFLNDKT complement(3125165..3125416) hypothetical protein; RB2501_01460 N/A MKLIANNFRGQTDWRIRTEEKDKFIYAYFEVCLPSGEWIKADFTVAVIWEDEGVCEAMKRLIADAEARWGVLLTKSPGKLLAI complement(3125413..3125772) hypothetical protein; RB2501_01465 N/A MNKVANLQESPTLPASQFCEAVLKLRRTTALDLDIGLDYISRNLEMGLRLTEDGEYIFDISARVRGKWFEPTLTDAQKQILREKLNREAELVEALLKAEELEEWEEPYHPYTNAPNYIP 3125863..3126240 hypothetical protein; RB2501_01470 N/A MNKIGQRFEEIMNDNSLNYRTFAEVLGVSDVAVRNIIKGKSNPKFDLLSALVGKYPKINSHWLLTGKGEKYTTIKGHTLSNASVQELAEYVVGNQKIFLEDPLFNQFVEKLTYKRMWEIDKSDKQ complement(3126226..3126414) hypothetical protein; RB2501_01475 N/A MNSDRKKEILDKLKGRDLVSSPANDKLYKELFEKEEAETNSFIEKINDLRKKSGKPLLSLLI complement(3126404..3126982) hypothetical protein; RB2501_01480 N/A MMIFISRVLTKIKSTRPGITAATVSGAAAIAIIARVGYILYNGDRDIEGDFMGFRWLSSFLYSFGIEIAFITVGMVINYSTNFMTKDAVNPFRFFGWAIQGVGFFFMFWIFIDASIFGDNVEIAFSICFAIVAVFVQTKLRKFFTNHISSLKRIIRRLNNTIILETPNHVKDVEVYYDEVMWPVLNEVADEL complement(3127242..3128021) hypothetical protein; RB2501_01485 N/A MFPTDKSTKYGWAMVGGPPVFINQLSTDNPPYSLDELPCGEQELFLTLGKIQIMRTLLVFLMCCGVAWGQVEFDGKGNFSLSQVHEVNGSRSDLQKWATEWAAKTYNNSNYVTRINDDDQILTKGSFEVPAIQTINGKEFTQGRRINYTLNVQFKEGRYKIDITDVALEQHPSYPDRLQDYFLGKEEYRNHLRRHYGPESGAELKSMTRLIENDRKYDELYTNIQKYGRSMVIPITVQIEKINQSLLAYMKQDHSDDDW 3128253..3128325 tRNA N/A GGCCATGTGGTAGAATGGTAAATACTCTTCCTTGGCAAGGGATGATTTTCGGGTTCGATTCCCGACATGGCCT 3128354..3128366 attR N/A TTTCTCTTTACCG complement(3128472..3129716) PHAGE_Strept_PH15: putative integrase; RB2501_01490; phage(gi190151416) 1e-07 MVQGKILLDTRSKGKKGHPIKIYISGNGSKKYISTGYFSMQEHWRDGVTRKHPNYSHLSTWIKRREFELQQQLNYCNEHGYTLREAVQYIKGKSSPQDEIEMLEKRLRELRGQPTVSLFDFWQQITHERKLASKSTRAFDQTLSQIRKFTDDIPISDITPGWIEGFKAFKYSEGCGDPGVHFYLVTIRTVYYAAARRKLIEDQKPFNGLIPQSVSRKKKVRLSKSDLLRIANYSPSKYAGAARGKAIEQRIAIFLFQIYIGGHDLVDVAGLTWDDVSGGRVSFMRKKIKRGVPVQVDNILLPQAQDIINRHGTPKAKRVFSFIPPHGTEQYEYYRRYYWKALKQMSEKLEITPPLKTKSPRYIFRTWAGDSGANIIHTMQIQGHKPKEETFKYQGRVPNRIVDQVLQQVLQEDV