gi|254555169|ref|NC_012984.1| Lactobacillus plantarum JDM1, complete genome. [asmbl_id: NC_012984].3197759, gc%: 44.66% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 38452..38652 PHAGE_Lactoc_bIL312: Csp; JDM1_0028; phage(gi13095918) 2e-23 MKNGTVKWFNADKGFGFITGEDGTDVFVHFSAIQTDGFKTLDEGQKVTYDEEQGDRGPQATNVQPQ 38744..38974 hypothetical protein; JDM1_0029 N/A MDFVDVYGIKHENCTLVAPAREYQRVVIFMDALGRRFVAMGPDPQPTKYGSSSQHWHQAQPSAAPEGYFHIDQEQP 39143..39159 attL N/A TGATGGGCAGTCAGGGG complement(39443..40597) PROPHAGE_Oceano_HTE831: integrase; JDM1_0030; phage(gi23097608) 3e-71 MATIKKYQDKDGNTRYQFQVYLGVDPQTGKKKSTRRRGFKSKSAARIALSRIEVELQQEPVLPVDNNILFVNVYHEWYDQYINTVRESTWARTAGMFDNHILPLFGNKRLRTITVNQCQRAVNLWFKEVTYNYKRWYNYLVAVFEYGLKHGYITHNPARMITMPVKPDSWGDKPDNFWDRDQLKTFFKCIDQQKETEKYCLFRVLAFAGVRRGECLALTWQDIDFVHKNLRVNKTLTQGKRGKQIIQAPKTKKGRRTVSLDNTTVEILQRWHKQQREYYLFLGFNTLQPDQLVFANTKNGFKSLNTPGKWLKRIITDYHLTPSITVHGFRHSHASALFAAGATIKEVQTRLGHEDVATTLNVYTHVTKGQNQQAANKLANYLGF complement(40676..41320) hypothetical protein; JDM1_0031 N/A MIKIDLKKLAKSKGFTLTDISKATGISMNTLSVLGRNVSTGIQFDTLDKICRFLTCTPNDIIKVLPDDYIVQVPAQKSKDGAIYAIGVKETVIHKSIVENSMYDADAEENIFHVKLISYTDNEAIFFVGLPVGSGFFNTPTESEEKTTKWLVSLNERNRASISKQATGIYLENYWNKKIALPQKVSIVFNVPNQGSVYSFTLHEKDNHVLLEDH 41511..41648 PHAGE_Lactob_Sha1: prophage Lp3 protein 4-like protein; JDM1_0032; phage(gi418489838) 3e-17 MEELHIGSVNTVYKMINDGLKVTSIGRLKRIERKELDKYLASKTI 41691..41798 prophage Lp3 protein 5; JDM1_0033 N/A MIATAILWVIKFMIVSFVGNVAFKLVKNPRRYFGM 41916..42146 hypothetical protein; JDM1_0034 N/A MTNSELVEQAKNLSVARDNLQMAIDYLDMVSASVNSGDTWAGQLFFSNHRAGNVVENMQNVADSIMAVSNDICPED 42160..42960 PHAGE_Lactoc_bIL310: hypothetical protein bIL310p24; JDM1_0035; phage(gi13095885) 4e-15 MKEFATLDKAIELAQQGYAVYPLIENTKKPPKGVAGYQAATSDQNTIFAWFKKHPAYNLGLRLDLSDLLVVDIDMHDPTKNGRASLAQLFKQGQTLPNDTYIERTANGGVHYFLKYAGAKARKIDVWPGIDLLSDFTVIAPSEINGKPYQAIDGRTLADIKPAPQWLVDKLAGQKVNWTSEHACNTRQKKYTGRLLDEMVTGTTQGNRNAWLTKIAGRMFGVGANPKTVYNMLSVINDSFIDPVLPSKEVNVIFQSILKRESKGVH 42960..44354 PHAGE_Staphy_2638A: ORF003; JDM1_0036; phage(gi66395453) 2e-72 MGKAMDLPAETREAANNVIKMQRDADWQNDFKKNSDDGIKTQSLYNIRLIMEHDEMLKGLVVFDEFSEQIVKTPQAENSLFKKGFWNDSDDTLLRSYIEDHYNLLFSKENITDAVVTEARRKTINPVKDRIEAVEWDGQPRAERYFIDYLGAEDNHYTRTITKKWLTGLIARAYVPGVKFEIVPILEGSQGLGKSTAGKNLYPDKFNDSLKGMGKQKDDYQQLQGSWIIEVAELSAMKKTDIEGIKNFISAQSDTYRNSYGRYALPHPRKCVFIGTTNQTDYLKDATGERRFYPIKCGVNKVKLDVWHPDENYMLQVLAEAAHWFRNGEPLYLDQATMKEAKAYQMAAETVNPMRDAIEAFLAMEVPADWENMSTGLKQSYVSDYGHHSKWLKDQVSNERKLLNQTTTLEIMEVVFHKTVDRYLTGRTNSEAKRIKLLMDNMDGWEAKRIRMNGKFPRGYVRVQ 44498..44917 prophage Lp4 protein 12; JDM1_0037 N/A MKVIYPSLVEQAFDIYVKQYGPVVSNRVNELKSCIYRALIKEGALDQNGEPTQKAKDKGLVGSFTPNEDGEYEPETVRDLKLMYPIYAQFSDDHFMKSSQGWLADAYVIRNVSSQVLNNPLSDEEQRKNAYKMLEQLDD 44942..45124 hypothetical protein; JDM1_0038 N/A MIKTKTIMRMSVQDLDRAINRELANRIDSDNVIDIKFSSNAFGADLDSSSAEYCAMIIYK 45134..45472 PHAGE_Lactob_Sha1: phage head-tail adaptor; JDM1_0039; phage(gi418489808) 2e-09 MKNYNLNRLNKRVQFGTVKSVQNPINGTTKQQFVPLFTVWCGEYTLTISNTISLTGTTATTNQLIAVRHDDRITTALEAILDGVTYKVAGVSSDSELNAYDVVTLTKVNGHG 45465..45854 PHAGE_Staphy_phiPV83: phi PVL ORF 63 homologue; JDM1_0040; phage(gi9635713) 3e-20 MAKPMKQCEHPGCRTLVAYDTRYCEKHRKATNKWRYHKRMYDSDESKYQQFYKSSAWRKLSRRFLESNPVCVQCYQDGVIRKANVVDHVIEIKDDWSRRLDESNLQSLCHRHHNRKTRLVREQREQQTK complement(46663..47661) PHAGE_Staphy_phiPV83: transposase; JDM1_0041; phage(gi9635740) 8e-55 MSPYNHLTLKDRECILLGVTLNDTYQVIAEKIGCSKATVSREIKRNGGRKAYSAVKAQENYQGRRLKSRRPRLLTDLKLRDFVLHCIVQRQWSPEQISGRLVHENSEWHVSYNTIYRGIERDNLGIKRKNHEARGFARKLRHRGKTRKVKGTIKERRGRFNDVPSVHERPVSCENRSWFGHWESDTVRGKTGRSALVTLVDRKSRYLLSQRVPKVNAKNVTQAMIDLLHTVTPKRVRTLTPDRGTEFAGYREVSQELSIPVYFPDPHAPQQRGTNENTNGLIREYFPKGTDLDQLTDQDIDKFVRDLNHRPRKVLGWKSPFEVFFGTKLRLI 47806..48279 PHAGE_Entero_EFRM31: terminase small subunit; JDM1_0042; phage(gi327198110) 2e-13 MSQKVKALASMKKHLTNDERDQRKDAEKALFDYPSLDLTPPDWLHDRALTEWQRVAPYLKANTPISELDRAMLASYCRAYATVQTCENDIRKNGLVQTNQDTGVRKPNPYVALQSQAMKDLKALANDLGMSLSSRARMELNKQKDETPEDTFEAMLS 48276..48683 PHAGE_Entero_EFRM31: terminase large subunit; JDM1_0043; phage(gi327198111) 4e-23 MIEYVDQVLSGRVLACQKIKWACERFKRDLSRSKDDSFPFYYDEDKAAQAVKFIELMPKTDGSQLTMQPFQKWIISELYGWREKTTGNRRYDRAFISMARKNGKTYLASGMAANGLLRERQPARNRQVLFRQQRP 48706..49980 PHAGE_Lactob_LF1: bacteriophage terminase large subunit; JDM1_0044; phage(gi418489385) 4e-85 MLSSGLRQVRKQSKYMRQRIKVQKQAITDLETDSQALALASDTSTLDGYAGTTVILDEWHEAKDRKVYNVLKSGQAQEDNSLLAVISTSGLNLNVPMHAEYDMLTDVLKGKTEADRYFVAIWELDDREEVYDQTNWIKANPLFSEPHVKQRMTEKIQADVDLAIKQNNLIPILVKNFNMWLQASEDSYISADDWAAGKLAKVPDLHNRDAYIGIDLSKSNDLTAVSWLVPIGNGQFYCDSHSFVGTKYGLDSKIKRDGIDYRSMERAGECSITRLDSGIIDYDNLFYFVQKLVGKYNWKVKAIAYDPYNAQTLITKFEKLSYPLFEVRQGTKTLNIPTRNFRDQLYDDKIKHNGNKILAYAVNNAILKVLNNGWQLDKARNSNRIDPIAALINAFVAGMDYYQESEDQQHAEDYYKTATAADLF 50135..51235 PHAGE_Entero_EFRM31: portal protein; JDM1_0045; phage(gi327198113) 9e-45 MSFFVKSNTTSGTHDPVADALVSLSSNDPYTFVSAAVLRNSDIYAAINIIASDIASNPIMCDTAIFNTMINQNPNSQMDGYHFKYALAANLLLNGNSFAEILPNHTLKLISNNQLTVEQDDVSGALTYTYTPTGGNSRQIAPNNILHFKYFTKDGVSGISPLYALKDERQIQSAGNKLLTGFFTAGVHGTTIIKVHQSDLGPEAKGNIRNQFDEANTGDNAINTIVTDDTMDISNLSLNTDVLKLVNSNDWTTRQIAKAFGLPPERLGVENNHSNQEQSGVQYLQGTLQHYFDSFTSELSFKLGHDFTFNTDKLLSLDPKTQQAQAVAGFTGGIMSRNEARAKIGLPPTDDGNIFLNLQKNGVTNS 51232..52773 PHAGE_Entero_EFRM31: major capsid protein; JDM1_0046; phage(gi327198115) 3e-40 MKQDRRLTIDAELRAQMPQSETPEDGPAENSADPQSKGSQTSKGKTISGYAIVWNSPSKDLGGFTEVVTPKALDGVDLSNVLMLNNHDYTQVLASVKAGTLTLETDDKGLHFTAQLPNTSFANDVYEEVQSGNVDSCSFGFDSDDDTDEWTKDDGGNITRTINQVKSLFDVSVVAVPAYDDTNVQVDTRSYEKCINQEKEPDNMAKQTIIDPNNNDNGNGNKTGIPAFEQYVRTHGETRDGLKTDGASAVIPKELITPVFQLKQSNYNLAQYATVKQVSSGSGTYPIATSQQSAVLATKDELADIADVDANMFTEVPFDVKTRAGKIALSNEVVEDAEVDIVSEVKTQLQQLVDNTDNTQIMSLLTGTSFAKATAANIDDLKKIFNVTLDPALSKMWLVNQSGFNYLDTLKDSEGRYLLQTNPTAPSGFTLLGAPVVMISDKLLANNADGTFPMIAGDLSQAVAVFRRNQVTAQWDKFDQFSQGLSIIVRNDYEVIDKTAVINVALGTVTAGK complement(53042..53113) tRNA N/A TGCCCGGTAGTTCAGCGGTAGAATAATTGACTGTTAATCAAGAGGTCGCTGGTTCGATCCCAGCCCGGGCAG 53182..53448 PHAGE_Entero_EFRM31: head-tail joining protein; JDM1_0047; phage(gi327198117) 2e-06 MAVTVDDIKLSLRIDVTEDDPMIQSYLDAAKDYVQTAVSKNEDLTVYKQYDFAVSLLTQFWYQNRVTDMKQTPYQVISMIQQLRGLIS 53592..53960 prophage Lp3 protein 20; JDM1_0048 N/A MRQDVKKIRNLLKQYAKLKRDLTVFNQVSSPSFDGVSSHSSRNGAESRLINYVDLSYQLKEVDDALNAIDDPQYQFILHDYIIEKRFNRNEACNQLSVSVSKFNYLKNRALEVFKLNYLRTL 54083..54283 PHAGE_Lactoc_bIL312: Csp; JDM1_0049; phage(gi13095918) 1e-22 MQSGTVKWFNADKGFGFITGSDNKDVFVHFSSIQTDGFKSLDEGQKVSYEVEQGDRGPQATNVVPQ 54370..54600 hypothetical protein; JDM1_0050 N/A MDFTDVYGIKHENCTLITPTEEYRRIIIFMDSVGRRFVAISPNPEPTKYGSAKSHWKQGKPNDVPKEYFHIDKKNC complement(54804..54879) tRNA N/A GGGCAGTTAGCTCAGCTGGCAGAGCAACGGACTCTTAATCCGTGGGTCCAGGGTTCGATCCCCTGACTGCCCATCA 54804..54820 attR N/A TGATGGGCAGTCAGGGG 55203..55910 PHAGE_Feldma_virus: putative sensor histidine kinase; JDM1_0051; phage(gi197322366) 2e-11 MKKILVVDDEKPISDIMKFNLTKEGYEVHVAADGEEALQKVDEVHPDLILLDLMLPKMDGLEVARQVRKNYDMPIIMVTAKDSELDKVLGLELGADDYVTKPFSNRELVARVKANLRRQGAPSAQPAEVEENSDIEIGDLVIHPEAYMVSKRGENIELTHREFELLHYLAQHIGQVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKVEDNPSHPKWLVTRRGVGYYLRNPENE 55924..57798 PHAGE_Feldma_virus: putative hybrid sensor histdine kinase; sensor; phage protein; JDM1_0052(gi197322490) 2e-21 MLRFKRKNFFKTINFKIALVFALLLLITLEIVGAIFVKQLESKNIQDFKQSVQIPTYIDNSLSEQLTVSSTRKANGQIKTILSNYNNTNVDEIQVVDSKGTIRGTSDVNDQSVVGQKTTDRNVKNAIYNNRTYTKSTYDTQNNGRYYVSIVPLYSSNSAGNSSQLVGVLYVRANMKSVYSTINNIMGIFVIASLAAMVLGLGIAIIIARAITRPIEEMKQQTQRIARGDYAGQVRVYSDDELGQLAKAINNLSIRVEESQESTEAERRRLDSVLSHMSDGVIATDRRGNITIINETASDFMDVTAEKAIGNSILDILKIRDDYSLRDLIENQDELMLDFSSNERDLILNAYFSLIQRESGFISGLVCVLHDVTEQQKIDNDRKQFVSNVSHELRTPLTSLRSYIEALSDGAWKDPEVAPGFLKVTQEETDRMIRMINELLSLSRMDSGTTRVDMELVNINEMFNYVLDRFDMILKKDDNPAKYYTIKREFTKRDLWVEIDTDKFTQVLDNIMNNAIKYSPDGGVVTCRLLETHNQVIISISDQGLGIPRADLGHVFDRFFRVDKARSRAQGGTGLGLAISKEVVQMLGGRIWVDSVEGKGSTFYISLPYEPYEEEDLWDDDSQA 57779..59104 hypothetical protein; JDM1_0053 N/A MTTHKLRRFILPILLTILILLSVVLSMYIWLNPSRYEHESKVSTTSSNSSLTTRTIDDIYLPTQLIHTNSQGGQSLLINKNVSLVSQFSEQLRKWDARSISKVRITSAKSYRALLNGTDSYVLNFPDSITVSMFNTVFKQHLSNFRSSEFSRIVIPVNDTNHIYFLNDDHHEIYSVRLKKKSLSSLKKVLAVDKVKRIAVKMTYEDNTTYIDYPKQVTMQHYSYLMSKAAASEIANRLLDADGNSTVSVHNRSGKQEYTTGSYKRMTVDSKLGTVYFEDYSDSGTTRNLSLTNQLKKSFNLLTSLGVPMDNIRYYGFDATSNSVIYRSYVEGFPIFNQTENGDVRIQLTSNGLDRYYFSLYSLQVPVPTTGQKQAVTLPSSTSVLKRLKAAGYKDSKIGSIELGYEWSQNKSSKLVIDLTPTYYVYYNGTWRTYTSMLSGS 59116..59970 hypothetical protein; JDM1_0054 N/A MNFRRIEWIFLLAFVVLDIFLGFMFVQTSSKSTQTTGDTATTIIREMRADNISFKNPDTSEGTGYYIAGSNESGLKQLLSQLTEQTARVQSGGKLVSTLRATTTIDTRNPKADLTTFMSQRTNVIHGTEYVYDADLSSNGDYVFVQKVADGEIMTGAGQVHLFVNKNKQLTSYTQTYVNHVKTLREKAVTISEKKALVALYQYNQVASSSRIVWAKLGYSRLLKLKDSSVYVPTWIFAVRGKNSSNVTLHRINAFTGSSMKNGSTASDTSSLDATVGMMWNAID 60329..61144 PHAGE_Lister_B054: gp51; JDM1_0055; phage(gi157325335) 1e-15 MVLKLATDDMKVSILASGSTGNVTYIETPEHKVLVDAGLSGKKIANLMASIDRDINEVDSLFISHEHTDHCHSAGILARKYGMDVYANQGTWDAMAHKIGNVPAELCHVFDPNTTLGLGDLDVESFSVSHDAAEPQFYELHHAGKSFVIITDTGYVSEHVEGVIKDADGYLFECNHDLEMLRMGRYPWPLKQRIIGDEGHLSNEDGANALMDVIGRHTKRIYLGHRSQDNNLKSLAHLTVASMMTERDFGVEHDFQLYDTEPEQATKLITL #### region 2 #### 513507..513522 attL N/A AATCTTCTTGGCCGCA complement(513673..514830) PHAGE_Lactob_Lj965: putative integrase; JDM1_0470; phage(gi41179218) 2e-45 MKITHKMIGSKRVYDVRGYLGKYTDINGNTKTKTYHHGGFSSSKAAKLAFDRAKVEFDHRKNNPAAIMDNPTFDEVYEVWLKTYKLGVKESTLNRVEGIFKHHITPSFGGMRINTITWQKCQEEALKWRESVKQFNKLAQYAALVFRTAQKMGVITTNPMKLVDVPKIAVDYSKDKAADNFWTAEQLATFLAVVDATDGHRTQPRYDRSALFYLLATTGMRKGEALALTWSDIDLKNGLVTINKTISRSIDNHQIISTPKTRNAYRTLSLNSSTIDRLKKYRKSLVVIPRAKDLIFTNQKGQIMSVMTPNHWLEALIGETDLPTITVHGLRHTFASIQVANNINVKALQMQMGHSDIKITLNIYAHLSQQELSAQVYDMSKILAQ complement(515000..515668) PHAGE_Sulfit_pCB2047_A: hypothetical protein; JDM1_0471; phage(gi472341905) 3e-05 MSNEDYGFVYALENKSFPGYIKVGQTKNLKQRLLQFNNTGIPDGKPTLLLFAAFLNNYKKAERILHRSLSDKRESSSKEFFKATYNQVKAEFELLIFNDSNAELIRPEKYNSLITGKTYIVSKRQIGSRPNRTFQYLSIPAGAQLTFKEDSSIKVTVIDKKNHVLCRCGKEHTLSRAAICCYDFFHNVSIEQQGKDRNGFAWFKYENTIISDIKPMVNQELE complement(515781..516212) nucleotide-binding protein, UspA family; JDM1_0472 N/A MKNGNVILVAIDNSASAFKVTDYAIKIANALHKSLYFIHVINESTPKIQRNQQDSVEGPTIQSLSEFYLKECTKTAINNDVDHAFHSIIYGVTKRKLVAMSNTKNVAFTIIGATGYDDLYHNRIGHIAQYVSSWSKSTVTIVR complement(516895..516984) tRNA N/A GCGAGCGTAGTTCAACGGTAGAACAAAGCCCAAGTCTTGAAGCCCATTCTTTCTTAGGCTGATATGCAGGTTCGACTCCTGCCGCTCGCG complement(517037..517705) hypothetical protein; JDM1_0473 N/A MLDLLSIVIILGLGAFIVGIILFIIDYAKQNPKRVAVTVMVSGIAVSAIAFATFGGIVSHNDKVAEQEAEKQALIRKKKEKRFKSAYSDLKVEATEVGMSSEKIGNKLSQVWHDAIWEDDGVKIDGKYYTDFNKAINKQYSIYVSDGTITELTSEESAMDSSYTTLKKNKTAKNNSKFKQATKIRSEAKKFSNLVTDPNGNYSTFTDNITEVDNALSSDVED complement(517797..518228) PHAGE_Lactob_phig1e: hypothetical protein phig1ep06; JDM1_0474; phage(gi23455774) 2e-31 MNSYKLYLQVHQLADKLGTFDPFVIADSLGYRVEYASLGNLKGICTTASSGDVYIGLSDELQEVPEKYVVMAHELKHGLDHTSCAALYTIGNNWEGKMEREANLFACSELTALYKEQYGDRPQSFNEIQMAYGLPDKFYELMF complement(518238..518615) PHAGE_Lactob_phig1e: repressor; JDM1_0475; phage(gi23455773) 3e-23 MALFDRIKFLANKQGKSVNDVESELGYSKNTLYRLKKTNPSAKKLEEIADYFDVSTDYLLGRESKAPTWATEDDKIDLDEWLKSNVPMGFQGMDMDDETKIKVRAFLEGVFWEDKQKHRNDDNKK 518928..519137 PHAGE_Lactob_phiadh: hypothetical protein phiadhp12; JDM1_0476; phage(gi9633012) 8e-09 MPTTLAGRELIKKYIDDREISITSLAATFGVGKMYMTQVLAGTRKSAAANELVLKIIETFKIRPHEGDE 519141..519356 hypothetical protein; JDM1_0477 N/A MTEKLVLRKQHLNGNNGTKPIFVDVSILDSIREIKEETGIPMRRIVEQFLCYAMKNVQTFVFYKNIRSEKL 519607..519879 hypothetical protein; JDM1_0478 N/A MDGVTLNLPSESLAPIKQELTRLITDVFKQIAKREALPYWMKKQEAQIYMNVSDKTLDKFIVDGLKVSIIDGTQRISKKSADEYYEDHEL 520018..520467 PHAGE_Lister_B025: gp52; JDM1_0479; phage(gi157325269) 3e-39 MSKETVEINGVKFEVDMDTAKRIDTFKVGDNVRLLDKRYNSSEIYTGVILGFYNFKELPTIQVAYFKDSFSGATIDFVNINSKSDDFELLPSNKYEADFDRDTVVGSLNQQIESKTSEMKSLEAKKAWFLKYYGKYFVNDGEEDANEEG 520623..520808 hypothetical protein; JDM1_0480 N/A MNNYKTQAKHWYRKLMKTPVGYVCLATYRFKQWQLYKHLARQSAMDHLRGEDHADIQPENN 520885..520950 hypothetical protein; JDM1_0481 N/A MGVLSPEAVLDKIGVQEKVRE 521271..521522 hypothetical protein; JDM1_0482 N/A MKITDIRDKHEQVLEYKLGQVFNDGDYTYMVTASRESKYQLTQLPDGVALSSSESSLEGLYEATDHYEEQLVATELIIRGVKL 521519..521998 PHAGE_Staphy_92: ORF029; JDM1_0483; phage(gi66396435) 7e-23 MNLYEMATNYRDLTNRDDLNPDTIADTLDALTDSMNVKVDNIASWIDENAADIDFLDKRMKSLREEKQRLKSLNDRLNHYLADTLDQAEIKKLTTDQHLVSVRNYRASTVVSEPDKLTADYVKEVHEYQPDKTAIYKALSAGKNVPGAHLEPNRKAVIK 522150..523409 PHAGE_Strept_Sfi19: putative helicase; JDM1_0484; phage(gi9632923) 6e-109 MADIARRATAKGNRVLFIVNRREILEQAENTFKSDDVNMSLCKMGMVQTITRHIDELTKPAIIMIDEAHHALSKSYQRIIQAFPDALKLLFTATPWRMDGKGLNVIADDLIMGKPISELINQGFLAPVDYYAPSEIDVTQLKTKRNGEFDEKSIDQAVKPKIYGNAVRHYLKLAPGKQAIAYAYNVASAERLAEAFNQAGITARAVSGKTDRAARKRIVADYRAGKIQVVTNAELFTEGLDLPNVDCVIMLRPTQSLSLYLQFAMRSMNPREGKRAIIIDHVNNVERFGLPTIDRQWILSGRDKHSKSSNGSPIKSVSVCPECFATFYRKGKTCPFCGAELGEEKIIETDESIKLKKIEANKRLALAKEIAENNAAKAVADKSPGELTTYAEIKAYAKLHGYKPGWSYFQAKMKGLIRK 523406..524122 PHAGE_Strept_PH15: putative NTP-binding protein; JDM1_0485; phage(gi190151434) 3e-60 MSILPKNEPHKPAGTPRNFFIWGATMSGKSYLAEHFPNVLVLNTDGNSAMGTRPSIQLRNVRNPDGSLKSSVIDQLQEVILELGTTQNTYETVTLDVIDDVCQLIEQAICLKAGVESLADMGYGRGYALFNTVLQSLVMDLKALPINVVYISRENDFTDDDGNTKTVPSLKTKFYNVVNGNCDLVIHTQHVGKNYLRNVTEIRRRYKASEINDSKILSILKAIPNALAPEVQTTKAGK 524125..524724 PHAGE_Strept_PH15: hypothetical protein phiPH15_gp20; JDM1_0486; phage(gi190151435) 1e-10 MSLLDIAANTLDNFDPKNDSVNAGSTGLPDGDYLTAVESIEHRSFDSGWDCLQVVFTVLDGDHAGEKEYDRISFATKSKAGKAIPDFILSRSIKFVIKLGSLLGVEMKPEYFASENETDTHEMLANVLAPEKGKSVILHVKHRPNKKDPDNPYVEYDLDATEQPETADITDADLPGDLGGAPMPTDADAPADPTDEAPF 524738..525292 hypothetical protein; JDM1_0487 N/A MSLNFYAGIDSFKNDNKDNTAITLKVGGGGLDNLLDKLRELKSDEVVNITIESARIHYDKITDAETGQSMYYYSRNNEGVWEEHQTDDTHLELEGVDNTVTTAETITADIVDRFLMNENYDYKPKSKFNPRKALVMISEGYSFDEVAKAQSFTTTKMLDELNMARDKFAPYAATWWQIEQALKD 525366..526160 PHAGE_Strept_PH15: putative replication protein; JDM1_0488; phage(gi190151436) 2e-57 MRNLVNYAVRYAQAGFSVLPMIGKKPMIKFADQPALTIDQIQSYWRSHPYAQLALRTTNFFVIDIDEHPGGADGFKSIADYPNPEYLRDTLSQATAGGGRQLFYLKRDDCAIQQRIGWLPGVDIKAHVNNYVMVAPSERNGKLYQWENHNPIVTAPRELVQAINANRDDTVDVFTDLNIDYTEKSGTATLFETIVDGLGATGGRNNALASFAGGLLFRGVDPRAVIQLGLLANANTDDSLTQREAKTTIESMIKKEIRRREANQ 526157..527431 PHAGE_Lactoc_bIL312: helicase; JDM1_0489; phage(gi13095906) 3e-83 MSAEEEADKLRKLEEQQKVVPLKNRINFMETAKGGIKANSLENVCLILEHDPLLKGKFAYNEFSYETEFMEDSAELMLEHGPLQDEFTPAVQRYIERKYKVMFTPKLIDAAVTEVSRRNVFNPVINYLNECYKKWDGVTRVADFLPVYLGVEKSPVTTLQTKLFFVGAVAKVFKPETKFDFVLDLVGGQGTGKTTLLKRMSNGWYTDQFTDFENKDNYGNMMRAWIVNDDEMTATSHSSFEILKKFISAEIVEYRPAYGRYTVRRYKNFVMARTTNEVTYLKDKTGERRFMPVMVNSALQKKSPITDLPQGTIDQLWGEFASYYRDGFRFGLTQDQEQMMADNREQFMYIDAEEDAIEQSLAQIKGDFVTSSEIAFKMGVPDIVKNRKLANKIKYVMDNKKEWHATQRRIKGVPKRGYTRVKSE 527689..528021 PHAGE_Pedioc_clP1: phage protein; JDM1_0490; phage(gi356870760) 3e-37 MREQEIQNQIRVAVSKNKCTIFRANVGKVEMKNGRWFDTGLPQGFPDLFGFRHSDGSIFFIECKNETGRPRADQIKFHKFLMKQHTIHGIARSPEDALKIINEGLVGYGF 528041..528265 hypothetical protein; JDM1_0491 N/A MQYEQVAVTEPKVLESTLGIQNNHDGTYTVTAIKKFIRKNDQVVSMLFTKNGLAALTGYLRMLTDNGDDDDNQV 528291..528677 PHAGE_Lactob_LP65: hypothetical protein LP65_gp037; JDM1_0492; phage(gi56693085) 2e-13 MADYVSAIQNGDTQGTPSSVNVIVNGKNETWDIKNDDVELLQFTGLKDVNGKDIYVGDIVNVWSNMSELKMEPKVNEIVSEDLFGTPGMFLKSLKAHFIEPCLHDYWSNQFEVIGNVHENPELLEEDK 528674..529135 PHAGE_Lactob_LP65: hypothetical protein LP65_gp009; JDM1_0493; phage(gi56693057) 2e-14 MKFYRKQPLEAEQFDGSQKLVFGYSVIPSGIIDAITGKPVYYSMLVDDVCQDSDDDTGVVLEVSDWIVKEADEIEVIADDVFKKTYAELPVIPENVACLIKQDKEWDYNLGMAFDDAFSGYIWKSGVGKWIIAHSDTFARAWLDGYVVEGKHD 529262..529573 hypothetical protein; JDM1_0494 N/A MEKRIDHEKLNSLVCEVEDRHKNGIIDASSKEMAPIWKMTKATMKSGYLAVSLRQYNLIEAYATKSSHTTEEKNQTLKQLHKKYSWLNRRVTEYRHGNLIIRS 529585..530016 hypothetical protein; JDM1_0495 N/A MGDFETNKKFLRRYRPYFRQIKRLETKLFVIDDRIESTHSPSMTGQPGGGKRRELADDLIQREEIEGRINRLIKKSRPIKAEITDCLDELTNSLEASILEQYFIEDIQLDTIALQMSYSFRQVKRLYGDGVKHAKIPRNCDTL 530195..530902 hypothetical protein; JDM1_0496 N/A MSKSEVIQNLLDELNNQNQIYIAIIGTILAVLGLAFTIFSFMQRRFSDKQIQKMEDDFKHDFKQDFKIEENNEVLRDMRATLAEVRKSEKLLKQEIITATDLNFENSSFLLSQVDGDTHTLELNNMLINFNTTFDKAISTHKLNLSTLQHVIVNLINCLQRIRRYKIRYDEEAYYKINSLFDKLSRQSTISIQANSDMNRYFTQHSLLKCLKSLKSELKECDKYMNNELEDHDID 530971..531186 PHAGE_Lactob_phig1e: hypothetical protein phig1ep39; JDM1_0497; phage(gi254854752) 2e-08 MEQPEFNATQAINETCYGLVKQGYSLHDIYSGLGNVMNGIEPKHLTKQELVIDLNIDTSKATCKLRHALDK 531649..531762 hypothetical protein; JDM1_0498 N/A MMTATIILLSERDYKPIQHVVFINQQTGKVFYQSTDW 531796..532047 hypothetical protein; JDM1_0499 N/A MRSRTDNTKQVVVYVVMRDQQANVLFAHRVYFSERRAKNYCKRMNNAKEFTGYYYINKAIFFDWKAFISKFTEAPGVKKIGEK 532158..532445 PHAGE_Lister_B025: gp1; JDM1_0500; phage(gi157325218) 9e-16 MQRIDKKSAVEKEKVDRYISLLDAFYQLDESIQQHGVMVKIENGKQIYWKTNPAVSEKNRINSALITLEKDFKPVKATPKVSNTATTSDEKGGLV 532442..534124 PHAGE_Lister_B025: putative terminase large subunit; JDM1_0501; phage(gi157325219) 5e-146 MIQQKYVESYLQAYKDGSIRLNKRRIKLVELIEKTVLTNENYYFDEEKIEDCLTFADKWFFPFTPWEKFLTAFVFLYDHTTERRAIRKFMVVVGRGAGKNGWVSVISSFLLSRLHGVRNYNGSIIANSEEQAKTSVDEIHDAVDLHSELKGEFYATNSQVHSKSTNSTLRYRTSNGNTKDGLRDGFVIFDEIHAYQNNQNVKVHISGLGKVRDSRVFEIGSQGYVRDGYLDKELAKADAILNGKAPIESMFPFVCELDNLKEMDDPANWELANPSFSKPMNGYAKDVYQETMDDYNDLELDPSGYDEFVIKRMNYQVEDLEKSVAPYEQIKATNRPILLDDLQGMEAIGSVDFASIRDFTADGLTIKREGKQYFISHQFARRQFVDKFYAYSAKPQDRPQSAPPIAEWEERGLLTVVDTPTIDPQAVVDWFLEQRKRFIIKKVVMDNFRADLLRKFFEDAGFEVVVIRNPTAIDGLLAPRIETGFANHQYIWGDNPLLRWNTQNVLVSTDSHGNKRYGKKEEIRRKTDGFKAFEYGQYLVDQLPDYSVNESLDMLADIDF 534143..535285 PHAGE_Staphy_P954: HK97 family phage portal protein; JDM1_0502; phage(gi257136404) 7e-95 MSVINSFFDLFTRRKDSSFIYDLDLFQDIKNRAYLKRMAIDTVINYVGRAVSQSEFRVMNKGLPVKDAMYYKLNVRPNTDESASDFWQHFIYQLIYYNEVLVIQDDDGDLLIADDFSRHEFAVYEDAFDNVTVKEYTFKRSFPMSDVIYLRYSNDQLEHYLTGLWGDYGELFGRMYELELRNNQIRATVKADMTAGVNDGKANKLQMFIDKIFQSFSKNSVALVPITNGFEYNEVSNGVGKNQTFDESNSVLMAFIDHVARLVGVPPALIHGETAESSDNQELFNKQCLSALLNKIQSELNAKSFSQRDYLKNGKQVEVIGINRPTLIELAEQIDKLGSSGMVTQNEVRSAVGLPPREDGDQIVMTKNYTMKGGENNEED 535272..536015 PHAGE_Lister_B025: gp4; JDM1_0503; phage(gi157325221) 2e-50 MKKINVKGPIISNDDKWIYDMLEMDSTAPKDVIDALPDDGSTVEVDINSGGGLMDAGTEIYTALMAYQGKVMVNIVGMAASSASLIAMAGNPTRISPVGQIMIHNVAGGLRGDYRDQAKLSEILKQSSEAIANAYHLKTGLSMEDLQAKMDSETYLNADQAKELGFVDEIMFDDQIELVADGGLPKPAIDKITELMKQNNSGMTTARSINPFKLSDSDIDRITTAVTQKLNVKPKVQTEKTFNPFAF 536036..537214 PHAGE_Lister_B025: Cps; JDM1_0504; phage(gi157325222) 4e-104 MIKFDTNVFKNFTDAREKYAQLVKNAAKPEEQQQGFTDMMDALGEDTLSEIKNQVHAQTEDYLDARRHDPKMSNEEVKFFNEIKTDTGFKEPKLLPETVVTEVFDDMVQAHPLLQAIGLQNQGISLKIIQSDASGVIGWGNIFGEITSQLDAKFKETKADQSKATAFLVLPKDLSDFGPSWIKQYVITQITEAFAVGAETAFLTGDGNQKPIGLNRSVKEGVAVTGGVYPEKESAGTLTFADTKTAAKELAGMIKELSTKENGKPVVAKGKTVMVMGPGESLDVEAQFMVQNLAGQFVTALPFGLTIIESEFAPENKVIAFVQGRYDAFQAGPLKIQPYDQTLALEDMDLYTAKQFFYGKAKDDKAAVVYDLKLATPGTTTTEPTTGGDTGK 537354..537659 PHAGE_Lister_B025: gp7; JDM1_0505; phage(gi157325224) 1e-10 MADEKMNPLLDQFKLRMKIYHKAEDANLSRILNASQRRITDITGIASNASDDVYDELVLERARYAYNDQVEFFDANFLDDLLSASLVSYEPGDDEGESTRV 537640..538029 PHAGE_Lister_B025: gp8; JDM1_0506; phage(gi157325226) 1e-20 MNRPEFEYKAPSVRTNQLNTPVRFFRTVKNLGPEPGRGQTEQAFECLGLAYDPSTKDREVLNVNEAKYGVTIKIRDTFGEFDPTTKDTVVIDDRRYLDATGQPIVWDILQVAPDLENNQFVKIVLGVTK 538026..538433 PHAGE_Lister_B025: gp9; JDM1_0507; phage(gi157325225) 2e-14 MTEVTVKFKGVDEVINKLAEKFSPAKLNRIENDALRVAGRRVAVELKNAVASYRDTGQTVLQVSVGNPHSRGGVRTIKIGWHAGSRWRLVHLNELGYTRFGKTYHPRGMGKVQGAFDSSRGPAKALEEAELRKLL 538430..538852 PHAGE_Lister_B025: gp10; JDM1_0508; phage(gi157325227) 7e-15 MTETKDMLATIYTALLANATIAKLTLAGDGSHRISYFESPETADHDNLFVVITPVGPPVPAAVGSDDYLNVQFTFQVNVESISRPARNAVAREIQNEMLALGFSRLAGAQNELDEFMTETNRFVDVRRYRGNTKLYDTNY 538867..539478 PHAGE_Lister_B025: Tsh; JDM1_0509; phage(gi157325228) 3e-19 MFVGYKRLKIQPFAEDGTKKGDLIIVEGQAHKGATTTAEISGLAKDPVKVPGSNIDYYLSRQGLGDAKVALGILDLPEASADLLAGFRVDDDKISYGGEDTLPPYCSIEMESKEDTGEIALVGFFKGTFTRDKISLSTLDSSKSFTPEADAWTFTPISSIATATNGEVMQKFVGDATKDATTVTKFEKQLFDPAGSDTTPSNG 539571..539885 hypothetical protein; JDM1_0510 N/A MSTPLKMELLIDGKKQTFTESFIPAGRILDALDLIETDNSDRKLRDVFEERVAFLSKVFTNPLVTTETIWNGFNAIGFEDHIFELICKVANVNPKKLQMATTPE 540072..543977 PHAGE_Lactob_LF1: phage tail tape measure protein; JDM1_0511; phage(gi418489397) 0.0 MADEVLGRMVIELGLDHAAFGKGLTGAKREVKYAMAEMKSSMAVLGQSGRQFDVLSAKSKGLSQVMMSQQRVVEKLGKAYKDSLVDGKPTAQTAKLATQLQNANAKLASLQTQYKNNAAAMAKARVEQTGFTGGLNKVSKAAVATGTSMKNIGSTMTSKVSAPIAAGLAIATKSAITFDSQIKSMGPLLTNGGAVTAKYRSQLDQLGDASKKMSMKYGVSTTEINNGMAELIRRGYTTNQVLGSMPSILDATMASGEDMGTVMNATASIVEQFGLKTNSTAGTMKNTQRVTDSLTYAANATAAGFGDMSDAMSYVGPVASSLGLSVEQTAAAVGELSNQGIEGQKAGTNLRGMLTSLIKPTKQNTEGFKSMGISSKQLAHDSHDLPQLIDDITHGTKGWSNAERGKALAQAFGRENQAAANALVKAGSKSLRDLTKDTENAGGATKKVAEQMSNTSANNVKKLIASLQVLGIEIGEKLIPKLTPLVKKATDMVQGFSKMDDATQNTIIKFALLAAAGGPVLSMLGNIVGGFGTFGGGIVKVISATAQWHAKNQAAKESLAMLKGATDATSGGFKAFKGSVDTVNGSASTAKSTFGLLKGAFTTAEAGAGVLGTSLSVTGAAVTGVGLAAVAGVAYWQLYGKEAAASAARIRQWGSDVGEQADSALTKFKGFSTNASASLTDFETASHTSTKSVAKDFGDMYTEMEKDSKDTIQQMQKDMKGLPDSVQGDLKKDIADRKKHNTTVLADAKENYNNAEAILKNHNGKMSGLSDTERTALLNSQRKMNSDEISLLKIGGSAKKNVLAALNGDIGNMTRKQRDTTINQLTSSMQKENKLYNDQSQQIKSMYDKGEISASQYGKAMKDLQATHRSTTDNMAAAIYKLDKANGTSKAQITQDLLNVGYTYKQAAAIVKRQNDDMSKSTSLVVAETGNMSKKSKAAADTWNSLVFDSKTGKVKTNAQAEVNKAAKSKDKWNQMKLLVKQGKMSSNAAAMVGVAAVQTKRWDGLTLKEKQAMIKSKGGDDLAGLIEKGKQWGKFTPAEKKAIITSKGGPELLGVMTKAQTWNKLTMAEKRAVLKDNASPAMKQASVSVKDWNNLTPQMKTVMAKAKGAEDVAKGVKNLKDWNSLPEREKRLIANDKGATGIIKKVTGNYKAYQNLPKNATKNLFAKDNASKNAGKAKISVDKYGRVKVTGKVLKATDRASGPAKNGKKGLDKFNSTKMQTKTAKGKDSASGSMNGARKSAMKYNGVNMALKTARGHDAASSPINGAHRSLDRYNGVGMRGKTARGYDSASGAMDALKVR 544082..544615 PHAGE_Lactob_LF1: phage tail tape measure protein; JDM1_0512; phage(gi418489397) 2e-17 MGNVTHFITTVFRKITRHATGTTGTDGNPIIVNDEESSVYREAVKYPGRPAFIPHGRNVYLDAPKGTQVIPAGLTAKMFGVSQYAAGTIPANSSIIQASKAINDSIGGDNTTINYNLGGSDSTQAIVAGLEAILNKLDDQQPTFEVHNDMIGEKLRTLIKQKDSREHNLNRFFPQGG 544619..545440 PHAGE_Entero_phiFL1A: tail protein; JDM1_0513; phage(gi281416378) 1e-31 MDALITNLNGTEHKLSDFGFQVLDFEESAPTITRTTKSFDGRAGSLDYGGRHVVKKIIINGLYWVKSLEQADDVRDKVNAALSQAEPIYLTRIYGGRNLYDVRESGKDFVMPAQTVDKKRFKVYRTDTNLPSIIERTGKGVYYTWSLEFETVELPYGESKPRSQTLVSGQSITYNGTVACSQLEQAFYFVVTAKVASASGFTLTVDGQSLIVTSPVVAGDVYTLSGMNNTRGNQNINDKTNAGYFVLHPGAANKVVCSISADIQIKNLCDLCI 545460..549428 PHAGE_Lactob_8014_B1: prophage tail super family protein; JDM1_0514; phage(gi431809813) 6e-76 MIKFHDPSGTPHFGQATITRTTSVNGGLSLTGEVFAGDDVLNGLDYGWWLNFDNEKYVITYKKLSDDTNTVVFDAVQQFFWDFAKVALHAQYTGSHEYTFYLGQLFDKSGYTYKNDITVPAFEKENWGYKNKLDLFNDIIDQAGVEFEVHNETVHIAKQIGSDLTSFARKGINLSDLTEEMKISDFATYAKGYGAFKDAEDQSKGRLEVEYRSELAKQFGDLEMDPIVDERYTIADNLIAALKKQVDATYTVSMTMNIYDLENAGYPNYEAPKVGDWILAIDEALNFKRKIRIIQLEEQFDVTGKRIGYTATCGDLSIVDQYTHLQSSLDSKVQRIQESVDNALSSANGKSTNYYGAKEPVSANEGDLWFDQSDSDPDKWSIKQWVNGRWEQLTLNPGEVDAKVDVAKKEAETAVENAKSASDKADQLAAKYDDTNALANQALDRAIDAQNSAVGLIDDVNKASQNADDAKSIANSVNSKYTTLTDGSTMTIAELENGLAAKLTKDDLSGYATETWTQNQIKVTADGINSTLSSVKTTVDGQTTSLNDLKADSRGLKAQFVTVNDTLGKQTKDIGTLQATNKSLTAGFDSLNADNTVNQHNISQLQLTATSLSNTIENVNQKVEDGLISTNIFRSANDFSRSYWTDTFGYPFTTIQTESRYHDSLIHYQGQGKTPAPYSTIAQQTITDDAMAADTWYTLSFYARGAGDNNTVGKFGVYFYGNGSDQSMSSSDGVEVLGTSDTHCIITLTPYFRRYVITFHTPKDFSGGHSFWARNDLDLNDGSLYCDFWHPKLELGKVASDFSVNPADTATISALSSISQTVDAIQTTVRGKVDNDTYQSKMTQINNAIIAKVSKGDITNENILPYSGYWSDTTGWNLFAWGASDKTLSLVHHDFYHNAADATLCIQTTQNATAPVGSSKFTLIPNTTYTFSFWGFASSNVVGTNVYILGRSYTSTKDYDFVHAVFENLKMSPSGINKYTATFKTGPTETQAYIRLDNGGSNNGQSAGSYFAELKIERGDTATPYTRVSSGEIQVTSDNINLKVSKDGVINAINISREGTLIYGNKLHITADTYIDNAVIKDAMIANLSANKLTAGSINAANINVYNINGANIVSNSITADKIQAGSMLLAMNSTLQTLKIGTDGLYTTNTSGAFIGKIHANNLIEHPNDWGLHFDLAAGAQYMAWGAQNSNDPNGGYVVKFGWTRNSSAGDFTLPWGGFWFNDNVMLHKNLSFDGGGIDVKDAYQLMKFAWIEMNGTKYPFFGSSNLKAGWLFGSSETYLVRNGGIINASKILGILNGQHYKFIKDLNSNGTVKGYVDVNF 549455..549937 PHAGE_Strept_3: hypothetical protein SpyM3_1099; JDM1_0515; phage(gi28876269) 5e-10 MNTTISFKNRELAGIANTLGKFKLKGKASLGRSALIRKLASKQEEYVSDRVLIQQKYFESDKDGNLKTQDDGSEKLIPKSELSDKKDPSKLAKDSESNLNSEMGELSDDFANIDFSEYSARFKALKLSLDDYPYELEKEDAIVYERVYDQLEQAFSKGEK 549939..550373 hypothetical protein; JDM1_0516 N/A MNLINRSIQYALSAETGNTDSVVVGVYGKSDNLEINGTLTIVADDLDEGTTFDDLSKKQLFALATKKLPTLLPTLAYTNYQFFVQNDTPVRLTAYSDLSNNGSYISLSSTLDQSDFTNKAIESVGYEDVKSAVKTILSQEFPTS 550403..550780 hypothetical protein; JDM1_0517 N/A MGIRRNYSILMTGVEIIMIGAFFVANTFRFDRPDLLNNLASHIDDPPFATINIIIGTVIVMVAIFDIRPLIKWCYAVAAFIWTIYGLAFMLQNIEVMGQPFGRLDCWLMFAIAGRVILESWAGDD 550780..551052 hypothetical protein; JDM1_0518 N/A MNWTVIIQSVLTFAGGFAAAYWSFKGSVKKASFSNEGIYADKTGDLFERIDKLTNERDDLKEQVMKLQGEVKDLTKAVKEMKQEMKERDI 551052..551336 PHAGE_Lactob_phig1e: holin; JDM1_0519; phage(gi23455817) 7e-07 MMEFIQLLNGGTIAMIAIATFVIVWGVKQTPLKNVYLPMIALGIGAVIGIAFGWLNGDIKPVVGLVDGLVAGAVSVGGNEVFKSITHALDGGTK 551336..551722 PHAGE_Lactoc_lato: putative lysin; JDM1_0520; phage(gi30089910) 7e-24 MSLNGFDVASYQAGMNVGEVAGDFVLVKATEGIDYTNPEFNGHAKQTLSAGKKLGVYHFIRNDSDIKQQADYFLTVVKPYIGKAMLVLDFENTTGSTIQNQAGVGLAKQWLDYVYQQTGVRSVLYTGD 551805..552269 PHAGE_Lactob_1: putative lysin; JDM1_0521; phage(gi62327117) 7e-12 MNGYQPRDLYGSLKHWKTAVMFQYTSTGRLPGWNGNLDFDVFYGDEAAWDKYAKATKMVINKSIVQKTTTKDGVWTITNEVGTFRPNQKLGIFKYPGLELTGKYYDKGESVKYFGYVSNPQAGYVYIAYRYNSKLIYYVACREIATGRALGTFE 552448..552463 attR N/A AATCTTCTTGGCCGCA #### region 3 #### 1021445..1021645 PHAGE_Lactoc_bIL312: Csp; JDM1_0954; phage(gi13095918) 3e-22 MKNGTVKWFNADKGYGFITGEDGNDVFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQAANVVPQ 1021832..1022839 oxidoreductase (putative); JDM1_0955 N/A MLKLGIIGTNWITQQFIDAAAASGEWQLTSVYSRHAETAQAFAAKNHADETFTDLDAFFSRGSFDTVYIASPNSLHFAQAKQAIAYGKHVIVEKPAVANQQEFEQLDAVLKAHPDVLLFEAARQIHEVNFQRVKDQIKKLSLVQGATLTYMKYSSRYDAVLAGEEPNIFSLNFAGGALQDLGVYLAYDAVGWFGMPEEVAYYPTLIRTGVDGKGVAILRYADFTVTLNVGKTSNSFLPSEINGLRDAIVMDNPAELGQITYQDKDGQEHAIGAQPDTNPMLAEARDFATVINDPSNHQTEYLAWRQLSRNVNKLLFNLRQSGHLYFTGEAPDTDK 1022852..1024186 PHAGE_Cafete_BV_PW1: putative superfamily II helicase/eIF-4AIII; JDM1_0956; phage(gi310831360) 1e-36 MLDVFKTKFAAAGFTELSPIQTAVAEPLAAGQSVLGLAPTGSGKTLAFTWPMLEALRVGEGTQALILAPSQELAMQTTNVVREWGQLIDAKVLAITGGANVKRQMEKLKKHPEVIVGTPGRITNLIADGKIKLGHLKMMIVDEADELLTDETLDQIREILDATFAETLQLGFFSATETKILDELPRWFGQHVEKIDVRAIDQTQGVVRHRTMQVGNRHRVDLLKRISRVDHMRALVFFNKMQELQHVALELRHQHVSYVALTSNQRQVEREKALRLFRQGKVGLLLTTDLAARGLDVPELPAVINYQLPKDVTTYIHRSGRTGRMGADGLVLTFGDDHDVRDFKKLMATTDYEIKPGYLVDYHIVDTKPDKVVPPLTFDHPETAGNAANGRHRVVSAGHPDEVKRVETSRKRPAAATPKKKKGHNKHSKKKGMRKKNRDRFSNQ 1024234..1024306 tRNA N/A GGCCTCATAGCACAACTGGATAGGGCACCCGCCTCCTAAGCGGTTGATCCCGGTTCGAGTCCGGGTGGGGTCA 1024293..1024306 attL N/A TCCGGGTGGGGTCA complement(1024428..1025609) PHAGE_Bacill_BCJA1c: integrase; JDM1_0957; phage(gi56694872) 1e-62 MASINKRGKKWNARVSYYDDLGNRKFINQGGFRTKREAQEWANQNEIDVSNGINPRLGKQLFTDYFLKWYQTYKEPTLAKSSRLRYQYTLGIVNNYFAGKRLDEITRTDYQKFLNDYANPVGRSPRSLSSSEKVNVQIKSAVQYAIDDGIIKRNFTVHTKISGRPEKPKEMKYLDGKDAEKLTRALESDLTFAHLTKLMALVSLQTGARYSEVAGLTWDCFSFDFKTLRINKTWDTLQRNGFADTKNEQSKRLIKITDHLADILKSFHALQIIKLEELGIDNPLDLIFINQYGRVPDNTSANQTLHRVLKRIGSKDITFHGLRHTHASYLIYKGVSIYYISERLGHSNYSTTIRVYSHLLREMEKKETVKALVALSSMDGLVHILVHKSYKNA complement(1025777..1025866) hypothetical protein; JDM1_0958 N/A MFDANRFDYQTAPAEVKKILKIWSKFQSN complement(1026143..1026235) tRNA N/A GCGAGCGTAGTTCAACGGTAGAACATGTCCACTCCAAAATAGAGTCCCCCGCTCTTAACAACTGCTATGCAGGTTCGACTCCTGCCGCTCGCA complement(1026425..1026625) PHAGE_Lactob_Sha1: hypothetical protein; JDM1_0959; phage(gi418489829) 5e-32 MGLLIMIVIFLALWKILGTLGHIFLPILAVLFILATWIPSQAIVMVIWVPIAILYFIGLAGYKHAK complement(1026637..1027413) hypothetical protein; JDM1_0960 N/A MRKIIMASSVLLGGLLLAGCGNSSSKSSSSNSDLKKETTSQLNKKYTSKIAEHAQEGKLTSDEKLILAAHDKVQAQEIDKTKAKFVGKTAIFPKRGTVEITHVAKVPTYDDNTATGKRVVVVIAKITNTSKKTRSADSIQTGNNEDASLGLTVYQNSDSTKENLSDDHEIDDPNALYNDATAKLTDQDLSFQKHSILPGKSENVVYEAFNLVNNKNPLIFKIQDGTGESNSSDVLSGHSTVKIPMSNVKEATLSSLIS complement(1027478..1027726) PHAGE_Lactob_LF1: Lj965 prophage repressor-like protein; JDM1_0961; phage(gi418489418) 3e-08 MAHELGHVINHDEGILYFSSFSNKSKYERMANLEALKILIPIYLSEVDTYADNSVMPFMENFGIPKRLEDDVVNAFRTNVSN complement(1027898..1028224) PHAGE_Entero_phiFL3A: CI phage repressor protein; JDM1_0962; phage(gi281416216) 2e-18 MTLFDRIKTISKERGYSIAEVERKAGISANYMYQWKKRNPSPKALASVADVLNVSVDYLLGKTDDNSTSMKPKQVDITDDDYIMTYQGKPIPPEDMEYIKRILNGGKD 1028481..1028696 hypothetical protein; JDM1_0963 N/A MFIRMETNNKAEAIKSWLANHRQLENQGTIADHFKKSITFVNLALNKKITTNGAERLVNEVYDYLVKKYKI 1028779..1029513 PHAGE_Entero_phiFL3A: anti-repressor protein; JDM1_0964; phage(gi281416221) 1e-40 MQEVQQVKFNGDLILTTEQLAEFYGTTSRRITDNFNANRDKFIEGTHYFHLEGSQLKQFKNQTRKTGLVSEHAGAINLWTKRGASRHSKMLGTDQAWDMFDELEENYFNPKQFALPTSPREIARLALQANEETNQRLDSVEGDVKDLKENQVIPNPEYSALNRRVNQRVSEVAHSYGHITQKQRGELFKDIGSGIKKIANVSARSMLRKKDYQMVMDFINDWEPSTATKTIIRQTSLRLDKEPA 1029525..1029734 PHAGE_Lactob_phiadh: hypothetical protein phiadhp08; JDM1_0965; phage(gi9633008) 4e-05 MEFENVREALKFLLEYNDTTLNPNLKSRVNGGKWEPSTVSEVQATNYDALAQAADMLGMSDLYLNEQPA 1029747..1029962 hypothetical protein; JDM1_0967 N/A MELIIKGTPEEIKSVLQAIGGSKEHGEIRMPEYEKSRESLESKFQKLDQTANCALKKANSNYNLIVQSMKS complement(1029949..1030158) hypothetical protein; JDM1_0966 N/A MGLSPKPVFQPHQLGWKDLDDFLLTNFKAGVGSISISPLLYSMNLEEIVNELESKGYSVEIQGDRLKIS complement(1030327..1030452) hypothetical protein; JDM1_0968 N/A MKLGKYTIIFRVNNTDIIQIIDISRNKLTDQQFVNRFQDKI 1030865..1031125 hypothetical protein; JDM1_0969 N/A MDSLISALSKLFTQAYEQGIADGRSQQAVDHKMIGRKDFYSEFGIKVDTFDKHYRDKEGFPKPEEDGKWYAPAVEKWLLNHQNLSN 1031268..1031447 PHAGE_Lactob_Sha1: prophage Lp3 protein 4-like protein; JDM1_0970; phage(gi418489838) 4e-27 MSKTEIQWLTYQQVMEELHIGSVNTVYKMINDGLKVTSIGRLKRIERKELEKYLNSKTV 1031481..1031735 hypothetical protein; JDM1_0971 N/A MVRDTDAFVGLGNKLVANADKAQANDLITEMNVASLSGHHSIIWNKSGISIGVINTLSKEDVSVSKCPGGGYVIDWQEALEMEE 1031738..1031938 PHAGE_Lactob_Sha1: hypothetical protein; JDM1_0972; phage(gi418489840) 7e-29 MKVHVGDRVSFKAEYSCGQLIREAGVGKVVDIKKIPFTLRTQKDVAVIEQNGQQFEIITNGIQVLK 1032263..1033123 PHAGE_Entero_phiEf11: putative replication protein; JDM1_0973; phage(gi282598768) 9e-44 MANEVINLPDYTVDYQPVPIKINNLEGLQASIAQYVSRYSNLVITEDNVTDSKQVRAKLNKLKKALDDRRKEIKRNYNQPLREFKTEVKKLEASIDMIIDPIDEGLGELEVQRREQRKADVMDLIAEMAPNYDVGVDEIEFDPRWLNKSISNKQITQEVASSMTVVKQAKDKLATATTMITKYAQAVDVDPIPWIDQLKQGQDVQYLLQAIDRQVESAKERERQRELKQQVAAEHQQETSTGKIVDTDTGEVVSLTRTLKITATKDQMWGLSSYMKKNGIKFEAVN 1033123..1033749 PHAGE_Brocho_BL3: gp45; JDM1_0974; phage(gi327409437) 7e-20 MSLEEAKTMGSFASALALFQQQVVAPKENGHVSYKSTKYDYVMLKDLIKAINEGIKGTGLAWLQDTKTNAGIVSVRTIVFHKDGYQFESSWTEIKTSGKAQDVGSAMTYARRYSLSTTFGVNSETDDDGQSANEGAPQFEQVSHDQQKLLTNLFNEMAKTTGKPAKDVQKGYLGLTTIGALRHDMANSLIKLITEQLEKLTGKVGDKA 1033746..1034207 PHAGE_Brocho_NF5: gp45; JDM1_0975; phage(gi327197630) 6e-47 MINRSVLVGRLTRDPELRYTNGGAAVATFTIAVNRQFTNQNGEREADFISCVIWRKAAENLTNFTHKGSLIGIDGHIQTRNYENQQGTRVYVTEVVVDNFSLLESRAESEHHQSANSNGHSSNNSNNRKYDNNQNQYGNNGGQIDISSDDLPF 1034223..1034789 PHAGE_Staphy_88: ORF027; JDM1_0976; phage(gi66396359) 2e-32 MTVYKKIPRYEGIYEASDHGTIWSVEGKRTTRKMKNGQIQKRIWKRRQIMPKREKRVRSKHSDLRVDLWKNGSHKTKLVSRLVASAFIPNPENKPCINHIDGNPLNNVPKNLEWCTYKENQKHAFKTGLNKSSKRVVLVGSYDNIQHSFISMAEASNFLGMNHGFISGLVNRGITNFGEYKIIVQREE 1034795..1035487 PHAGE_Lactob_Sha1: hypothetical protein; JDM1_0977; phage(gi418489846) 4e-123 MQRSRAKYFERQGKHYLLVELNEQPNLDHAETVSGSRDLFYVDGEIADTRKARPQQRRLFFALLSDIYTWSGMPTDFLKNLFYLQYETYTFGKQISLSDTTESSVSDANQLLDLVIDFMFEWHVPFKEGYKLLPREQEYYLFQCCRHRVCMICGNRADIHHVDVIGAGLNRTHVDHTKRHVMALCRVHHSEIEQIGSVAFSAKYHVPVDGIKLDKETLKRIGLKGKYSSD 1035537..1036343 PHAGE_Lactob_LF1: DNA replication protein; JDM1_0978; phage(gi418489431) 1e-44 MAQRRMFSNTITDSDLFMDMPKSAQLLYFHLNMHADDDGFVGNTKSIMRMTGSSDDDLKILLAKQYLIPFENGVTVIKDWHIHNYIRSDRKHPTKYTSELKQLELNEDDSYSKLTFGSQASTNGQPNDGHLVGNCHTEVRLGKDRLGKVSKGKVNKDSHHLAKPNYDPSSQPYKIASHLLTRIKQRQPDFKDPNLQKWANDIRLAHERDHRDYEKLDWLVDWSQDNSFWQANILSAGKLRKQYDTLMGQAERDHPTNVAPQTREDWFG 1036343..1037128 PHAGE_Lactob_Sha1: DNA replication protein; JDM1_0979; phage(gi418489789) 6e-147 MKNVTKLFNQATIQKVVAARGIDTTKLPTKEELDHQTIDRANAGVIANRKRYYYRMSVWSGGVPLRFSFNDWQVDKQPNQAKARELGNQAFKLARQLETNQFNVALAGGPGVGKTSLALAIMYQLMSVGQTAMFVSTAELLRLVNEKYDAPDVRERLNYVLKDMKKVDVLVLDDFGTEGGKPTEKGFYKPVHKDLRTLMYDVANARWNLNINDGKLATIITTNNTRSQLENMYSGQTIDRLYTKDTSCQLLFDNMEGVRSV 1037264..1037572 PHAGE_Lactob_Sha1: hypothetical protein; JDM1_0980; phage(gi418489790) 7e-51 MASKNWPKELEVIHKLEARYGSMDNVPESKLANLHKMPGIKTVSGDYMEITRTQYNAIKLVMEGKQSKTRTSRELKRSNSWIDRRIRAIDENKYYITEDEDA 1037847..1038278 PHAGE_Lactob_Sha1: phage transcriptional activator RinA; JDM1_0981; phage(gi418489798) 1e-74 MKRSTIRKVEDILRDYPKIDKYIEEREQELRYPTATRDENVGGGKAQYKYPETTLNTIITIDDDRRINALKHQREVIDDCLDDVGHDTEVIVTELYFKKHQRYTIDGLITNHLINVSHTKAFKLRNEFIMECAKGLGLYEIAY 1038606..1038767 hypothetical protein; JDM1_0982 N/A MSGAQIRLNKDYPDSAPLELWGTKVNDPTMWEYLGMWNPGINDWQSQSWQVKY 1038789..1039448 PHAGE_Lactob_Sha1: HNH nuclease; JDM1_0983; phage(gi418489799) 2e-18 MVKMINTKYGYVTPQEAEMDAHLDKWMKRHAKQHGAFSLDKNKEVQHAMTLMKHCNWGGCNKVVSKSQSFCDKHEAMNEQRKADYKASLNHQSQTDTGKQVRRDHQAYYNHVRRDPEANTFYHTKQWQTVRDYVYSRDMATCQVCGNAVTDRKIVDHIHPLKVSNEERLSQDNLWTLCYRCHNIKTNLEMKIAAKDNGNAILKHAKREWWQKIISERFK 1039721..1040074 PHAGE_Lactoc_bIL309: Orf38; JDM1_0984; phage(gi13095843) 3e-15 MLKDNSFANEMDKTLVEALCDNYFVLRSSAKSISEHGAQFEVFDYSTDSKGKVIHKELKAIKKNPAVDSLDKATKNIRAISSELGLTPQSRAELLKLGDPDDDDEDSPFGGDDDGEF 1040061..1041977 PHAGE_Lactob_Sha1: phage terminase-like protein large subunit; JDM1_0985; phage(gi418489802) 5e-121 MASSKVQQFDFSQRGVEVDSVFRKLDNEGYFDEIWKAYRDPATAYAYLVLSGKQMAGRKMKLALFRHLNDLKRSFYDDAFNYEYDLKQCHHILDYAKVCPDVESGKPMPLMVWQQAILCLLQGWRNESGEKRFTYALISVARTNGKTYLMNILLTYGYLIEAGNRKNLDFAYSGTTEQISKKGFRYLGSTIDYLAESQSYFKKRIKAKEINASADLIQSFKSRNQILRLTANSGKWDSYHCNTAVLDEYGDAAYDDDVLSKLSSGQIHQTNKQLIAISTAYENSNVPMFHDYQRLTRVIEKDNERKSETSLFLCWEQDSIDETDRPDTWEKSNPLLGLAEMHERLLKGLLDEKDKRESTGNVAWFQNRNLNMWLAVSKDKYLQLDDIQKSVVPNDSFTIDGRDVYVGLDLSRLDDDSSLAFIFPHFKKERQMMFVYQHSFVPTAHSQQNVVLKSKHDGINYSDVEAKGYADVARNADGLIDEQIIGDWFLDFIEEHRLNVKAFVYDVHLASPMVEWMDKNHPEIPFITLRQGTLSLDAPTRLLQKQFIRGLITMYDDPILKYSLTNAVLTSNNYGVKVDKAVHSAKIDCVDAIIDAISEAQYWYTSPDRREAEDSAKHPFANMKPDEVNDYFKDEFSF 1042197..1043315 PHAGE_Lactoc_bIL309: portal protein; JDM1_0986; phage(gi13095846) 2e-67 MFEKRSQFLGSKGYVPSFSVSNGKVIPHNFVDARRALQNVDIFAMINLISSDIASCAFQNTGKYDHLLKQPSKLINGYSFWQSSLIQALLTGNSYLLIHGELGSTQWLEQIPTSQVNVNLADGLENISYEINFTDDRGTVVADNFEMIHIRLMPTGEIVGGQEFMGISPLDSLIYPVEVSENANRLTLSTLINGINPSTIINVPDAKLDKESKKSIRDSFDEQNTGENAGKTIVMDQSAQLSTIQINADVAKFLNNLDWSADRVAEAFGVPSSYLNRTKADAQSNSQQIMSFYASSLNRYINPMISELAFKLNLPDLKLNVRDSTDVDGSQIIDMISKLNTGANPVFNADEVKTLLAEKGVISNGIIGNQDS 1043287..1043892 PHAGE_Lactob_1: protease-scaffold-major head protein; JDM1_0987; phage(gi219563201) 3e-42 MELSATKIHKDENVRSIYIQDLKTRDLSSDDTTAIGQVSGYAVVFGKPSEDMGFTEYISPDAFDGVNMNSVIALYDHNLDNILGRVDSGSLELKVDQNGVLFTLNMPNTTLGRDVYENIKNGNLKGCSFGFTIADDDWEFDNNDNVIHTVNQIDQLVEISITALPAYTQTSVSVSRGLKQFNDDQQYRLKAGFLLDLLEKE 1043899..1045281 PHAGE_Lactoc_bIL309: capsid protein; JDM1_0988; phage(gi13095848) 2e-112 MKIETLQEELAKNEAELKAKTIASRSLLDKEDSDIAEIKRSVDEVKELRSKSDGLREKIEALKLLSEEENRASKTDSKGDSDKEDGDNTEDDGESTTDSTKKQTKSSKRDDDPDDSDDGGSDDGSSDDSELEEDSKTKTKNKRGSEKLKTLTKDKEMEINKRDMLSVLKNGKTTRDVTGGIGLSDGSVLIPQDILNVEHETHQFPRLGSLVRTVSVKHTTGKLPVMWDTDEKLSDHSEYGATTKNNMLKVVPINWDLQTKTGAYVYSQDLLSDSDYDWQSELAQNLITLRDNTDDDLIIKALTDGVTAVEATDLVAAIKTALNMTLKPNDSAAASIVLSQSAFNALDQLKDTQGRPLVQPDLTKGTGSTILGKTVVVIDDTLFPSAKAGDVNIIIAPLQKAVINFKNNEITGKFMDTYDVWYQQLGIYLREDVVQARKDLIVNIKGTTNTTSGSTAGTGK 1045372..1045650 PHAGE_Lactoc_bIL309: Orf44; JDM1_0989; phage(gi13095849) 4e-06 MAKQVCDELHIDQTDEELATITSLLVSSQLIVNDSIEYSAYPDIADSPLYARAIITLAQALYYDRNLANGQPKGVLLMLDHLDAICLAKGAG 1045930..1045998 hypothetical protein; JDM1_0990 N/A MDDSNGYLTYDYLTLKLVTKGA 1046001..1046408 PHAGE_Strept_DT1: putative tail component protein; JDM1_0991; phage(gi9632427) 8e-28 MANDDMADQLASWLKDVHKPVPNEAEQEKITAAGAKKLADNLTEVTRKKHYSSHKDEKYGHMADNISYSANDIDGEHDGSSIVGWTNKYHDMNAMRLNDGTKHIRADHFVDENLANSQDDVFNAMLDEYKKGDDD 1046408..1046788 PHAGE_Lactob_phiAT3: putative tail component; JDM1_0992; phage(gi48697268) 9e-16 MLLPVSQVASLVNALNLTWLDKVYLNTIPKEDLDNTDLTVMLLQETDSSPAYLANSTFKGLAMGVEIQIFYKVNLADDFNPLEAEIALMKSFKEAGWLIVSSQHHTTDPDTDQVTKTIYVTKNEMI 1046803..1047444 PHAGE_Lactob_Nu: major tail protein; JDM1_0993; phage(gi78000030) 9e-23 MSKHNIVKATFALLDDNGDLIKDATKGLSTDGIYVADHQGEGFSQINVTAIEAAGTPGWGNGQIKRTAYGKSMPTLALTALDLDFKINQMLKGFTQNPDTGAWVRQLPKPHVALIAESQSLDGNISIYECFNNIEFVEEASNNSTDTNSEAAYSTVLNGTVLTPLKPDIFLAANGVQQPYMIAKSNDTNFKLDKLMAETFGGYTSSPSVVPGK 1047521..1047895 hypothetical protein; JDM1_0994 N/A MKINAKNYFKINKTADVTPTNNIIRLATKVQIGMLESQDAEKEITELDAMKNGLELQDEMTDFVQQVMGYTDKQMETINDTISIERFGEGVGYLIMRLNGISDADIKLSEQKQRKAIEDAKSSK 1047940..1048125 PHAGE_Lactob_Sha1: hypothetical protein; JDM1_0995; phage(gi418489813) 8e-06 MKNQQEDFNLLAKQLLTEGLSPKEFDDSSFFNMMASLNARKKEDRAELVDPLEAINQTYGL 1048157..1053307 PHAGE_Strept_DT1: putative tail component protein; JDM1_0996; phage(gi29165636) 0.0 MAKKVVGREMTSKVGLDSAEAVKSLKQLTAEVRANTSGWKAQETALKSAGEYQKAAAARVDGLAKSMEAQKAKIDELKSRQSGLNRDTKDGEETYLKLSDQINKASRSYDSMGGQLDRAKSKLQYYNSGLADLQKGYKQSTALSESYVKRLEAEGKSAEANKAKLGGLKQAYSNMEAQYKAQTNELERIKTASGATSDAYKRQQVRVNETATAMAKAKTSQNELLKAMEKEPHGFMHGVRSKLDSIDDKAKKTSHLFGTILGAHLVANGITNALSSMTASFGELTSAVTEYDNKQRTMTATWTTLTGSNGKGKQMVDIGNGLASAFNQNINVVDELNQSFYHVFDNAPRTKELTKSILTLGDTLNLSDENVTRLGTNFTHMLSSGKMQLGDFNMINDQLPMYAGKMLEFEKKQQHNSKLTMSTLRDQMSAGKISAKDAEEVMNSLGGKYAKASENLMKTIPGMERSIRTQMPALLDAVYKPIANMKSPLMGQFTKWIGDKNTKAEFKDVGNALALQINDITKAFAGKKFNVGDSLNKMLSNLAKGIDKVGANIIAHKKEIKSFFGSMKTASKTSFNVFVQSLKDIDPILKIVGGFAEKHPKVFAGLASSAFVASKGISALKLAFSGLDLAKGLGGKLSRIVLKPKVDGAEGKRELTKFVSFVKRSGTGMGHWLKMAASVTTTKAKGVLSSMWTHTKSVGGKIGRGLKWTAKIAYKGASKAFSVLGAGIKTLGKSFLSLGRLLLTNLIGLVVTAVVALGVAIYEAYKHIKPFRDAVNGMGTAIKKLFTGKYGWEKKVGSALGKVGNTMGKWAKTTTGFFKKHKTEILTTLINPFAGLATWFLKDTKTGKNIQKWSKGFSKDIKKMGFKKAMEKQVNDASKAFSKTKFGKWFKTVSDSFDGFKKSFKKSWNSHWSAVGKSLRNNWNGSVKNTRNFFSSVSKKWNGFKNGFRKGWNSHWNAMTRNLHSAWSSSYKHTRDFFSSMGKKWNGWKSSFRKSWDSHWNDMRSNLNHYWNRSYKHTRDFFSSMGTKWAGWKKSWSHSWNNHWDKMRSNLHSYWNKDLSHTRVFGHSMGDWLSTFKKSFKGGWSSLGTGVENIFKGLWKDLKRFARDGMNDVIDLINGGINAVDSVIHTFGGKKKTIGDLSHVHFAEGTGVLSGSRNPITHPTMAMLNDGNDSPQTGNKEMVMLPNGDSGIVQGRNTKMMLPAGTEVLSASETAMLMSMQGVSHFSNGTGVGGFFGDILNSVTSGISGVTSWVGKKVNGLEKFFNAAEKVIAHPIKSLENLFSWSSKGVSGVMSNIGHGLFNGVEKQAKTWWSTLWGGVSDSLDSGASSSTLVNAMEKYGATNKYVYGAEGPSAFDCSGLVEYTLKKLGISFPRTSGEQYRASKHVSNPKPGDLVFFGPGGSDHVGVYTGNGEFYSAENEHSGMGISKVHGGGYGSFAGYGRVPGLSDSTSSDKKSKSSGLLETIKKQVGSGFWKFISKLADMFGDGGSSNPGGSGVQRWKPDVIKALKKNGFEASASQVSAWMKVIARESNGDPSVVNNWDANARMGIPSKGLVQTIQPTFDAYKFPGHNNPLNGYDDLLAGIHYMKAKYGSGASAFARVSGPEGYENGGIINTNQLIEVAEHNKPEMVLPLTNKSRANQLIAQASQVVNGNNGSQVASTNSESNEKLDKLISLMSAILGNMGSVQAVIAKSDVVNAVKSDNKTASQYSQMMGY 1053384..1055156 PHAGE_Lactob_Sha1: minor structural protein gp75-like protein; JDM1_0997; phage(gi418489815) 0.0 MTLQRDDFEYAGLNSRDDLQVEMGNVVLPSAPAMAEQVTDIPAMYGNQFNGTDFTSRTISIPVSIYCADNQDAFNQVMHNLSGLLLSDDPSDNGKEFPLVFGFEPKVTYWGHITAISDPAPINTGMYDMALTITFVQSDPRATLPQVETPLKNGLNTITVDGTARTEPVIQVVPKRDLKHIGFTLNGGEYGLGPDSDEDQAVAVQPYTQVVNSDVLNTMVEWTNDANAIAQMKTAGKYIYQGEADSNRDTQVLMVKLANGVKQYGSHQPDWYGPGVRFTGMTNSLTNYRVKTRIHHIKHSGTHNGRAMGRVEVLLLDPNGVTIGRFGLADTNSGGTPTCYLQITKPGGTFAGGDGKHETFYNGKGPSGSSSNGRDQKIKIKTGTTTKTVVKRSRNRHGKVTTRTIKRKVDKYTTVVNKEEKSALSTSWLELDLIKNGKVFSWSITQYYTSGSHNGQPCRDPKRFLIVHGTFVDRDSKYQSALGGIGGVFFKHSITEDDQKVGYENPYLSITHLDIYQVNNVAQDKPKYIASAGQEIVLNCETDSTTVGGKLASPIWSTDYPKLSPGVNSLTMIGDLDDAQITLKYLPRLL 1055223..1057634 PHAGE_Lactob_Sha1: minor structural protein gp89-like protein; JDM1_0998; phage(gi418489816) 0.0 MALNNQYLILDSNLKRIGTLTVDGATKFSNDSVKIQLADSDTTSTSYDDDVNVGTNDTFDGTINLNAQSKKFDHQGQLDVLQGQPDSDKVVAGNNLAYYDELSGHWYVMRIYSVEENNTAAVKHVTTANFTNLCLYSLAHHYPIATTASASTIQTAFNECFNATGWTLDYQTTNVMTPSITIDGKTKASTLVQTLIQAYNVEIDPYVEIDSQGNITKKVCVITDQLNADVVYNEAVFGKNMTSIKRTTVSTPVTKLIPYGANGSTIAVVNDGKPYIVDDEANQKYNPDWQAGLYYEAIVTANQISNSAGLKSWAKDMLKLYNHPRTYYEVNVTPNFNPPLGATIRFKDELIEPVLDASGRVIQRTISFANPDGNTVGFGEYTTVQVATPAWMMQYQNALSKAVDEAKKDASSIKPVALTPDGNNFTDTTQTKRLILQAWEGSTNISSYIDSKGFIWRRYNTDGTVDTSYQQTGYLINAGSDAVGTLHGTIEADYIQDDPEIKLDATGISYLGVYGPDDNGAHSATQYMARLSNGQYLTSRARDDNGSSDTMFALQDSKFAVQSVMLQIHGQHGGTFGVQEVNNTVYIWNIVSLKNDHNYILVRFPYLPGVTLQPTDSRVQQIMALKGYGRINYDRQHDMVSIGYSDGSTDILKASDLLAGNYNVLYSFNITDYGIDFNKNTYQSECLDFPYFYFAAGGGQETNDDPHKVWALNVVHKGAEFEVYLDNDLDFPNLTDENREVETCNVFYQNGQPYMLFTFNTNALLINPASMEREKVYTIPMINRSAASVIDKGTISENDNADD 1057651..1060446 PHAGE_Lactob_Sha1: tail fiber; JDM1_0999; phage(gi418489817) 0.0 MAESNATQVILTDDGIKIIKAQNTADNAAGGVANLNDPNLMSVIEKQTQASQYAGLTSQYNVILKRAKDANISTTALTTAYTNLNTFMATILTDTTKASDVDRDTYKALTGAYNTALSNVQTALSNSFNTDISNMQSSVSVASQAASSAVIVASQAAVTGNNASQSASQAVVVASQAKSAGDNANSVANSASQAASNAILAGSQASVSASQASADYQKLSAGVNDGSIVHITTETVIDKGVIGTAEIANAAITNAQIGKEAVGMAQIANLAVGTAQIGDGAITNAKIGKLAVGTAQIEDAAITDAKVGNISANHLTAGSIDFNTIAGKNINASNITTGTMSTDRLNVGKLSALSANLGDVTTGSLKGVDIVANSFSTPNGSFTTDSNGSVVASNLTIRGVTNLVYNSALLGSSWTSVPGWSLTNNGFCGLNVTHDGVKSIGFNNTTGAGVWNLFAQTKLYPLNGITSQSFSQPFSASVWFLELGSDTSLMYAFTLAFFDSNGNRIDGAYANQVWNGIGSKQDWRYVTINNAVAPSNAVSVGLQYWSYNGHGNAYFSSPMLTQTAQVTGYQPDTGNVVSAGEIDGSVINGSTINGTTFHGGDIINSANNTAKYYPMTITPDGAYKSTYFDSAVGLQSSVESGAISYKYRSMIGSGQYLAYDSVINGQGFESQSGYTSAKDTTFSNPETITGYVNVTPASGIYLYGPTQKINFAGNADNIGSNGITMDAYGNMYAQANSTYWRIRDINGNDIADFGIDTAGANNIFLHRELDVGNFQINTAHTFTSADGDAIHFAKGRGGAADIYAGAVHYDSLVKSSLLSVKRDVRKADTAYWAQLVNSIDLATYQYKTDDNTSHLRLSSIVDDVNVTKQWQLPDVFISRDENGRLNGVDDSVLLNATLATVQEQQKQIDQLNGHNMELEARLNKLEAKLNG 1060439..1060678 PHAGE_Lactob_Sha1: hypothetical protein; JDM1_1000; phage(gi418489818) 5e-35 MDSILITNYKPDYTNNIMTISIQINTLGISSQVSITMDEFNTAIAGGAGGADRVKLKVLNTLIDSLTALKPVTTTTQEA 1060827..1061942 PHAGE_Lactob_Sha1: prophage Lp2 protein 53-like protein; JDM1_1001; phage(gi418489820) 1e-78 MAKTLSFTDTSAQTVKIGDTTTSFTLICGNDNVATDLTNATSITVKLGNASGYLKSATVDPASLTDPTTGQVTVKFNADLMTSLPAGSYVIEVWVVDSTGTSIYPSDGSTGFTITNNIQSANGYTITAITFDDFVKEMNKAASTIAKGDKGDKGDKGDTGPQGDTGPQGAKGDKGDKGDTGSVDNDGLTKAPAFVKLQTQVTNSAVGTNLLIGTATPVSITGNNSNNKVADTYTLVGGMSAYALYQKYGSTFTLSYDWSVTDTASAYAGQMQQQFVGNPWGFNDLTTISNSNTSGHKITTFTLSNNSGNTATKIQFHIDNVPSTSTITVSNMKLEKGNVATDWCPNPSDILTQSDYAKIQAAIVALGGSLK 1062209..1063366 PHAGE_Lactob_Sha1: endolysin; JDM1_1002; phage(gi418489821) 0.0 MNKRKLKALILMVGAIFMAFLMINLNSQASTSRDQGVDWSKFQSNSGVFGYSTDKFVFSQAGGFYGGTNIPQTTYNSQVKSAQHAGKRVHTYLWDGVGGNMTNAKAMMAYYLPRVRTPKGSIVALDYEDGASDSVTANTNVILAQMALIKAAGYTPVLYSGKAYLNAHVDTSAIVRAYGSCLWLAEYPNYLVRTIPDYNWFPSMDGVAIFQFTSMYKAGGLDCNVDLTGITKSGYTTTSKKQAQANVKKAQAAKVVKYNQRGVFYPNRTLAVRYTDSDKVSQVATYYKGESVIYNAVIIEHDYVWAHYTRSNGLYGFIKLGVTNGPAYGKRVTGQPVSHTYYTVKSGDSWWTIAQRNGLSMTTLASQNGKTIYTTIYPGQRLVVR 1063366..1063629 PHAGE_Lactob_Sha1: phage-related holin; JDM1_1003; phage(gi418489822) 6e-42 MAQYDDTTKLLMDIQKDVAATKTKVENIEEKLNQVDDIGDKADKALAKSIEASHQIDRVTAIQNWLIGVLVSGVLVTLVIYIAEKFL 1063641..1064108 PHAGE_Staphy_IPLA88: putative holin; JDM1_1004; phage(gi215401230) 2e-05 MIKKISFKNVDGSLNGKLIAGIISLLIVLIQQVFAMFGVKFTGDWSAIIAVVNTVLTILGMLGVITDVQTVTVPTVKSDEESQVEAAANKVADEAQTPTSTVAVVDSSDHLTLKRRQNPPHKQAKSSIINPLRFGVGDFLCITRLGILVHIWCTP 1064151..1064164 attR N/A TCCGGGTGGGGTCA #### region 4 #### 1074721..1075896 PHAGE_Mycoba_Tweety: gp19; JDM1_1014; phage(gi157311208) 2e-10 MMNKRRWLLSLLPILLGLIGVGVWGSQQLGQGARQVTPKTIKVQQAASKIKSATKKQMTTKPKAKPGQLTEEQAIKQIDQLIKSHHIMGTLLLTTNGPAGVRVRTYGYADDANQVRNTATEAYPLASLQKAVTGVMIQKLVNQGKLSLTTKLSHFYPEIPYANQITMRELLDHRSGIRMTEITPKTILPTETARLNFTLQHLRSTNNHAYAYSNANFTLLAGVIRKVTHKSYQAALTNDIIRPLGLKHTYEYNDIPGNVINPTSYRLANGFGQSGIISKPLQSSELGCGSLYMSVGDYYKFMHGLQSGQLVGEAGLKSLADNFQIKYSAGVYYQAGQLIRVGGNDNNFHSYYMGTRNAKVGLVLFENQGVFGGDNQVAYKIRDILLKTVPF 1076086..1077204 PHAGE_Megavi_lba: UDP-N-acetylglucosamine 2-epimerase; JDM1_1015; phage(gi448825506) 4e-30 MTKPIKVMTIFGTRPEAIKMAPIVLQLQQQPQFEPVTVVTAQHREMLDQVLTIFHITPDYDLNIMKPNQTLAGITSRVLTKLDAIMDTVKPDIVLVHGDTTTTFAASVSAFYHQIPVGHVEAGLRTWQKYSPYPEEMNRQLTDVLADMYFAPTELSRQNLLKENHPDAAITVTGNTAIDALKQTVSMDYQHAALDLIQPGHRMILLTMHRRENQGAPMEAVFTAIKRVVAQHPDVEVVYPVHLSPAVQTIAKRILGHTDRIHLIDPLDVLDFHNMAARSYFIMTDSGGVQEEAPSLNKPVLVLRDTTERPEGVTAGTLRLVGTDGQQVAAAMTSLLDDSAAYQRMADAKNPYGDGHSAEYILQAIMKKIGTH 1077592..1078521 integral membrane protein; JDM1_1016 N/A MNLKARYPKIAKSLEIIIRRYGQANVSNNAIVLAYYALMSIAPIILIAGNLIARFDLKSGQILAYAQEVIPSNVYQTFKPILVSFLSSGSSSSLSIGILVTVWSASKIIAAIRRSLNEAYGVTDAQNAVWTRIIAFFLTLGLLLLIVGLAIFFTLSQLILDVILNLTNLTRAIIPNWINQLLENKNLITFVGMFVVAMLLYYFVPNAKVKLRYIWTGALVTTIGWIVISQGFRVYIELFAKRITTYQTIGSLIVLMFWLNFSGILLMFGGVVNASVQEWFEHTIEPKSPRMIRRIRRQFFKRKKTTKKE 1078711..1079427 PHAGE_Acanth_1: hypothetical protein ATCV1_Z300R; JDM1_1017; phage(gi155371247) 2e-25 MIHQLLAEFMGTALMIIFGVGVHCSEVLKGTKYRGSGHIFAITTWGFGITIALFIFGNVCINPAMVLAQCILGNLSWSLFIPYSVAEVLGGVVGAVIVWIMYADHFAASADEISPITIRNLFSTAPAVRNLPRNFFVEFFDTFIFISGILAISEVKTPGIVPIGVGLLVWAIGMGLGGPTGFAMNLARDMGPRIAHAILPIKNKADSDWQYGIIVPGIAPFVGAACAALFMHGFFGIG 1079679..1080872 PHAGE_Sulfol_STSV1: group I glycosyltransferase; JDM1_1018; phage(gi51980189) 1e-07 MRLLFIDAFVGFGSVGRIVQELYDTAEERGFECCIAYGRGDAPDGYNTYKIGSKAGVIEAGIESRILDNHGFASRNATKRLIAFIEKFNPDVINLHSIHGYYLNIKILFDYLHKTHRKVVWTLHDCWPISSHSGFVQLNDAGKIPQYESKYDSTQYPKNLWWHRKSKNYFKKESVFTQIEIQDLVLVTPSVWLKNLINISYLSKYDCRVINNGIDLSLFSPTSKDTFREKYGITKNQKILLFIANYWEDRKGLKYVRELAEKIDDSYQLIVVGDLMKQRLPENVIHIRQTQNREELVELYGEADYFINPTLADNFPTVNIEAQACGLPVLTFDTGGSAEMITQETGVKIIDKSTQGIIDALKLAEKQHFSSEKCIENSKNFEKNAQYSKYIDLYEKM 1080971..1081258 PROPHAGE_Ralsto_GMI1000: ISRSO11-transposase ORFA protein; JDM1_1019; phage(gi17546156) 6e-07 MTKFNLDFRIKVVTEYLSGKGSTALARAYGISTYSIILDWVHRFERRGIKGLKDRSMSQEYSSQFKVDVLNWKTQNRASLPVTALHFDLSSPSTI 1081827..1082375 PROPHAGE_Lactoc_Il1403: IS1077F transposase; JDM1_1020; phage(gi15674057) 1e-32 MIAPNRLKRRFKTDRPYQKLVADVSEFRYGNKSQDERVYLEPILDLFNGEVLAFNISNHPTVEFAVKPLKEALNQIPVLDYRTTVHTDQGFQYQHHHWQIVLKDHRAFQSMSRKATCLGNAAIESFFHIMKVEVMDEQFETKAALIKAMTEWIDFYNHRRIKTKLDGKSPAKYRELTVQKVA complement(1082444..1083640) PHAGE_Strept_phiSASD1: gp39; JDM1_1021; phage(gi298103504) 1e-09 MSKRMKQMGILSALLTFVCLALLISVGYTDRPNVSATVYVNAKNAGLSEKVASNTKILQKILDSNTTGTTHIIIPKGTYYFDSGVIKMHSNLTLSFEKGAIFKSRNNATVFFAYPSSKKGYDGGTSNILWKNATLVGSDENGQGSFTQSMNHAQDVKFQNCTFYDAENPNGHIFDLDGSHNISISNCSFYGFNANVANDYKEAIQIDYSNPGAMSYQLDGDKYDDLPSFNIYVSNNQFLPINSHNRIKYYAPNPIGQHATYDNGKSGIIHNIYFTNNKVVDSKPRKTDTTGTINFNAVSNLYIENNQFSNILTTGISNYIRIYNPLATYHMKNIWINNNRFTNVNPTNQYILIRSTMPENPIKDIYISNNIVTTHLTHTIFINSLNNNVTQKNNKFVK #### region 5 #### 1094265..1095134 PHAGE_Escher_phAPEC8: putative glucose-1-phosphate thymidylyltransferase; JDM1_1032; phage(gi448260372) 2e-100 MKGIILAGGSGTRLYPITRAISKQLIPIYDKPMIYYPLSTLMLAGIQDILVISTPVDTPRFKELLGDGHDLGLNLTYAVQERPNGLAEAFIIGADFIGDDSVCLILGDNIYYGGGLSKMLQHASAKPKGATVFGYHVNDPERFGVVDFDENMHAKSIVEKPDHPASNYAVTGMYFYDNQVVDIAKNIQPSPRGELEITDINKVYLEHNELDVELMGRGFAWLDTGTHDSLQEASSFIATVQKRQNLKVACLEEVAYRMGYIDADKVYDLAQPLKKNDYGQYLLRLIGRA 1094692..1094706 attL N/A TTGGTGTCGTTGACT 1095138..1095719 PHAGE_Escher_phAPEC8: putative dTDP-4-dehydrorhamnose 3,5-epimerase; JDM1_1033; phage(gi448260371) 8e-34 MGKLKVTTTKLQDVKIIEPAVFGDKRGFFTETYSDRDFKEAGIDFDFIQDNQSLSAEAGVLRGLHFQRGKAAQTKLIRVVTGAVLDVIVDVRAGSPTYGEWEGYIISESNHRQLLVPRGFAHGFVTLTDNVNFLYKCDNYYNAEADGGITFMDKDLNINWPIDYDQAITSEKDAKQQTFKEFEQNNPFVYGEI 1095729..1096757 PHAGE_Escher_phAPEC8: putative dTDP-glucose 4,6-dehydratase; JDM1_1034; phage(gi448260373) 2e-67 MENLLVTGGAGFIGSNFVHYVYNHHPEVQITVLDKLTYAGNRANLEEILGDRVKLVVGDICDAPLVDELMQQTDAVVHYAAESHNDNSLKDPWPFIETNIIGTYTLIQSAHKFNKRFHHVSTDEVYGDLPLREDLPGHGEGVGEKFTPTSRYKPSSPYSSSKASSDLLVRAWVRSFGLQATISNCSNNYGPYQYIEKFIPRQITNILSGIRPKLYGSGKNVRDWIHTNDHSAAVWDILTKGKIGETYLIGADGEMNNKDVLEMILELMGQPKDAYDVVKDRPGHDLRYAIDSTKLRTELGWQPEFTDFRSGLKATIDWYTDHQDWWQADKNKVESNYAKNGQ 1096827..1097669 PHAGE_Escher_phAPEC8: putative dTDP-4-dehydrorhamnose reductase; JDM1_1035; phage(gi448260370) 2e-30 MAKVMIVGANGQLGHELQRLLNEQEIAFDALTEKELDITDLDAVKAKIAELQPAVLYDCAAYTAVDKAEDEGKALNWLVNVDGTKNLAQVAAEQGVKLVYVSTDYIFDGTNKGEYLEDDPANPKNEYGRAKWAGEEAVRHSGADYYIVRTSWVFGEFGHNFVFTMQNLAKTHDKLTVVNDQLGRPTWTRTLAEFMVHLVKTEAASGTYQLSNDNTATWYDFAKEILKDTDVEVAPVTSEQFPQKAYRPQHSVMNLDKAKATGYKILTWQDALNEFLKSLQ complement(1097751..1099304) transporter; JDM1_1036 N/A MKVSRSKSTMLNSSILTLVQIFTILVKFITQTIFIKYLGKEYLGLNGLFTNVLSVLSFAELGVGSAIVFSLYAPLAKRDENSISALMNLFRKAYNAIGIIIAFAGVVMIPVLPYLIKDYNDLTHVSLYFVLYISNSVVSYFFTYKRSLLIADQKEYISALNQLKYTALQVVLQVAVLFFFHSYAYYLIVAIITTLLSNFTISRKVDRLYPYLSKHRDLKVDTKSIHIIRNNIVGMVGSKIGSIVVRSTDNLLLSAFMGIYIVGIYSNYLLIVTSISSVCTKLISSVTASVGNLIAENNKKRTFDVFRTHYTINFFIVSVSAGCLLVSLNPFIKFWAGKSYTLALSIVIIIVLNYFFDQLRQSSLTFITAYGLFVANGKKSVVEAIMNFAFSFTLLVGFHLGIRGVLLGTILTNLILNSWWEPLLLFRAGFGFRKKYMRFYLINYWLSNLAILSFIFVGSQFIFYLDTYIHNSNFLIALINSILMLILQLIYFTIFYSRTSGYKYLLKVGKHLLLRKH complement(1099367..1099963) PHAGE_Bacill_BtCS33: integrase; JDM1_1037; phage(gi392972759) 7e-33 MINIYYNVEPLRSNEEITDFVNKAQNGTHGERNALLILIGLNTGLRMSDILNLKVGQIRYHDIVHITEKKTKKRRVILLTRLRPQINHYIKDLPDNEYLFTNRQHQPLSVNAVYKLFQTIARKMHRTDIGTHTLRKTFGYHYYQQTHDIGTLMMIFNHSSEAITKRYIGLNQDVILKQMAGFSLGIDMLPGIKISDKR 1100351..1103599 PHAGE_Roseob_SIO1: gp7; JDM1_1038; phage(gi9964615) 7e-15 MTRAAAADSEVTNDSASQHVTSISTDASKNQHTSSNVILTNDDKSVSASINQDASASVVNKAVSATSQENSSVQNTSQATSTSKQESSSAKNTSQATSTSNQEANSAKSINQATRTSNQESSSTKNTSQTTSTSNQEANSAKSINQATRTSNQESSGAKNTSQTTSTSSRKINSTKSQAQSLTTTTTGKAVRATSTSVKKYSTKTKVSYSTLLQQLRTSKALISDEAALTHVDKDNFLKYFSLNGSATYDAKTGIVTITPNQNNQVGNFSLTSKIDMNKSFTLTGQVNLGSNPNGADGIGFAFHSGNTTDVGNAGGNLGIGGLQDAIGFKLDTWFNSYQAPSSDKNGSEISSTNSNGFGWNGDSANAPYGTFVKTSNQEISTANGSKVQRWWAQDTGESQALSKADIDGNFHDFVVNYDGATRTLTVSYTQASGKVLTWKTTVASSYQAMAMVVSASTGAAKNLQQFKLTSFDFQEAATVNVKYVDTTGHQLAQGTANYPDGAYVNGRYTTKQLIIPNYRFIKMDDGSVTGTKSLDANGTLIQSGDNGTVIYVYVPEYMAIVKTVNETINYVDENGHALTTSYTANPIHILTVTNPVDGTTTTYYSTITTSIELDATTGRPVDSGWVLGNSQDFDAVTNPQIKGYTVTSTDAPNSDLQHVSAQTVTGDSGDLEFTVVYTKNVPIVTTESKTVNETIHYVYTDGTTAHDDYVAQPITFTRTIFTDAVTGEKTYGGWSAAQQFAAVDSPAIKGYTPDQSKISTQTVTGDSSDLEFTIVYTKNAPTVTTESKTVNETIHYVYTDGTIAHDDYVAQPITFTRTVSTDAVTGEKTYGGWSAAQQFAAVDSPAIKGYTPDQSKISTQTVTGDSSDLEFTIVYTKNAPTVTTESKTVNETIHYVYTDGTIAHDDYVAQPITFTRTVSTDAVTGEKTYGGWSAAQQFAAVDSPAIKGYTPDQSKISTQTVTGDSSDLEFTVVYKADSTSTKPVKPEQPTIPTTPTEPVKPGQPTTSTQPVKPGQLTTPAKPDQPMTSDKSVQTITIKFVGQRLPQTNETDQQHMTLSGLLLLAMSGLLGLLGMAKRQHKE 1110371..1110385 attR N/A TTGGTGTCGTTGACT