gi|339717962|ref|NC_012725.2| Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence. [asmbl_id: NC_012725].134346, gc%: 62.71% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 87368..87380 attL N/A GCGCAGCTTGTCG complement(89026..91632) phage integrase; bglu_4p0800 N/A MNKKFLAGPVGRRKASRLERSVRRDSDPTLAWVAELYPELAAWRILAVEWLSGETHNLGQRLQALSNFFERYLIHQGLPMDPAVFMAQATQLPNFHQTACPDSTWGISANNLIHNFLQFVLSRHFSQVGEDGSAKVLHGYRNPVLSMTRAGLPQRGESVYSPLPYGYIDQLQQMLAAGPHFRDWQWAQGALGSKIGQMGASAPDWFEVTEDQIDRSDPDCVWRMRKLSRNYRGGQVLQMWSPVRWVALLAKLILPLRTSQVRVLDSGEADTWRYTAGGWELNGNEIAEGSESRPLQQGVFRRDNDRFNHGNALTVLYINTNKTADVSKSGSENGYLLPWTHGGATHQNVFYWFEKLRNWQEKYNPISRRTSWAELDRRHIVAKTGFQLARYPDACFLFRLPEYPTELTRHFPLQDQALNTCWFHLLKAFESRLADRSETQHNGTPIRLLSPESRKRTLFPLHSLRVSLITALALDGQVPFSVLQKLVGHSRLVMTLYYTKPGATHIRDVLLDAKARLDANKHASIQNFLLDTSHDELVQRAICNSASSIANGIPEHPAARNAVGWMPMHHGLCIAGGNASDSTENRTIGGCHNGGPIVLPGTATANAKYASVPGGNRNCVRCRWFVTEPHYLPALAAHFNTIAYHFDEARNACLSNERVLLDLKKQKADAEEANQAFLHLDTFRQAERVWEGSMRRFNDFAEDLTACWRLIERCKVALERAAGTSPQLVAVGTASDVHIAFEETESELLQLTGVCEDVELYPDLDAGKAIFRRSQLLDAVLYRDNVSPVFMMLSEEEQLRVGNAFMRRLARQMDPRNPVLGKRQIINLIDAGSSLSERFGVDFAELLSECNSIGAVMRKPQPIDESKA complement(91625..93040) phage integrase; bglu_4p0810 N/A MFVSIRAKVLTDETGVYTEIPALLTAAGVLEPLIDYFLHRSHDRSLEWMRKVTRSVRLFLEYIQINQDEHDPHQLFQNFAKRLYTGTFDRVTGIDATGLCWPPRAPHDAARIITHLTDFFNWLGEVRPEATTINPRYAGSTFDRQTDEAAYQYRRSKAFLGHAWAPNAGARTGYWLRSKRVPKVAQLEPPAFPERHFETLLFKGFRYEDRYDYRGMLITLLLHGAGFRESEPFHLYVQDVFPDPLSTRQAKVLIHHPHYGTAPPDWCDERGRPRKANRAEYLGQCFGLAPRTDLMDRRHAGWKGGMHDGPYYKQAYWFTPEYGEWFLELWHSYLKQLARFDRDHPFAFVNIRRAPYGAMYTLTQYNKAHAAACRRIGLEVGKVLGTTPHGHRHAYGQRLKQAGVEKPMIRRFMHHASIESQEVYTQASFSEARKALEEATRQLNRDRTSHVSSLMRSSENAISSSDLPGHE complement(93125..94369) major facilitator transporter; bglu_4p0820 N/A MPTTTTAKSNNSTDPAESLATWALALAQLVSWGSIYYSFSLLVVPMEQTMGWSRTSTNAALSLGLLVSGFAAYPVGKWIDHGLGRRVMTIGSLVAAAMLLMWSATSSLTVLFVVWIGLGLSMAATFYDPLFAVLTHRYPLRYKTKITLVTLVAGFASTVFIPVTQFLVGAAGWRFALVALAACNLAICLPIHVVAIRSSRLDPDASRPSVERRAADAAATDLALRSPTFWALALCFTTYYATFAALTFHLVPLMVERGVSNTVMVITMALIGPAQVIARAVWFVFDRKVTITAVGFIVVTLFPISTIILIMAGKSAALLWTFALCYGAANGMMTILRGTIVQQFLWTEGYGAISGMLSFPSNVAKGIAPIAAAGIWGLTRGYAAVEWTVLLVSSMSAVSFLIAAKCSQGSGDHR complement(94338..95102) NADPH-dependent FMN reductase; bglu_4p0830 N/A MSTDLPNINFSHLDMPDSTKLEPRTISQHPPRILLLYGSLRPTSYSRLLTLEAERILQQLGAETRVFDPYGLPLADSVAADHPKVVELREASIWSEGQVWCSPERHGTLTGVFKNQIDWLPLDSGSIRPTQGRTLAVMQVSGGSQSFNSVNALRVLGRWMRMVTIPNQSSVAKAFQEFDEDGRMKPSSYYDRVVDVMEELYKFTLLVRDRSDYLTDRYSERKDKAPASVTTLANAAMSHEHSTQNADNDDSEVE complement(95116..95943) arsenate reductase; bglu_4p0840 N/A MSVIIYHNPECGTSRNVLALLGEAGEDLKVVEYLQSPPDRATLERLIADSGMDVRDAMRIKGTPYKELGLGDPSVTASQLIDAMLDHPILINRPFVVTPRGTRLCRPSDAVLDLVESLPDRDVLKEEGVPFIVAREITGGDAGLSTALAHAGLPVDDLAESGRRFFEFTTLGGSRVGYGGFEQYGSDVLIRSVTVEPSWRSKGVGRNLVALLLRHAFDAHARVAWLLTTDAQAFFEKAGFKLSSRDTAPAAILATRQAVELCSATAFLLSRPITL complement(95953..97014) Bile acid:sodium symporter; bglu_4p0850 N/A MSSTDSMARASRPAIGFFERYLTAWVALCIVAGILLGQWLPWLFQAIGGMEVAQVNLPVGVLIWVMIIPMLIKIDFGAMAQVKGHWRGIGVTLFVNWLVKPFSMALFGWIFVRHVFAPWLPAAQLDSYIAGLILLAAAPCTAMVFVWSQLCKGDPYFTLSQVALNDAIMIVAFAPIVALLLGLSAITVPWNTLIASVGLYIIIPVVIAQLLRRMLLAKGESYFNNAVSRLGPYSICALLATLVLLFAFQGQAIVHEPLVIAMLAVPILIQVFLNSGLAYLLNRKLGVAHCVAGPSSLIGASNFFELAVATAISLFGFQSGAALATVVGVLIEVPVMLLVVSVVNRSQRWYETV complement(97001..97522) Protein tyrosine phosphatase; bglu_4p0860 N/A MSDKTYNILVLCTGNSARSIMAEALFNTLGKGRFHAFSAGSQPSGTVNPFAIERCESLDYDTAGLRSKSWDEFGKPDAPHMDFVITVCDQAAGEVCPIWPGKPITAHWGFEDPAAFEGSDEEKRAVFTKIYRQILTRVSQFVNLPLHVLDRNSAQKEVRAIGESYAEESNEQH complement(97680..98012) transcriptional regulator, ArsR family; bglu_4p0870 N/A MDSNLVVRALGALAHESRLAIFRALVVAGPEGMPAGEIAQQLGLSPSGLSFHLKDLSHAGLVSSEQKGRFVFYSANFDAMNGLLGFLTENCCTGTDCSVQGQSQCGSVKS 98333..98992 cell division inhibitor SulA; bglu_4p0880 N/A MARAGSRGIDTGHAALSAELPGGGWPPGCLVELLAQQPGIGELRLLAPVLARLAPKPVVIVQPPHRLQPAALAYWGVDPAGFVNLKAPRTADALWAADQALRAGTCGAVLLWQHAVRSDALRRLNLAAQSGGALFFLLRPTSAARDASPAPLRLALAPKRDGIDVTFVKRRGAQRDEPLFVPLSPSPILLDRHARLDRRASAAPHSRIVPAPLARAIVE 98910..100388 nucleotidyltransferase/DNA polymerase; bglu_4p0890 N/A MLVWIGVHLPRLTLESFRPLSPEPSSNDVDGLVVLEQDRVVALDRAARELGVTLGMRRGGVLTLAANARICLRDTAREDELLRGVAYALLQFTPSVVLEAEAVVLLDVTASLRLFGGIRALRRRVRQLVASFGLTAAVSLASTGAAAWTLARGLRGGTALTPRSLRRALARAPLAVAPPARRYAEWFDELGCSTLADLQRLPRAGLKKRCGPALLDWLDHVAGSAPTAYEWLEAPPAFDVRIELPDRVEHADALVFAAHRLVLQLTGWLAAKQLDVCAFVLKLEHERGRDAIAPTELEIVLGAPTRFEEHLMRLVKERLGRLELPTPAIAIALHAHRVQAAAAPSETLFPEPGGTPQDHARLLELLTARLGAENVLTPAPAADFRPEVAAQWVPLEQRKKAAPAPADLPRPAWLLEAPVQLLMRANRPFYGTPLRMMSSGERIECGWEDGQAVTRDYFVAEDDHGVCYWLFRERVSARDEREPRWFLHGLFG 100395..103544 PHAGE_Mycoba_Gumball: gp68; bglu_4p0900; phage(gi206599772) 8e-66 MCAAPIGVLPAYAELQCASNFSFLHGASRAEELVERAARLGYSAIAITDECSLAGVVRAHVEAKAAGLPLIIGSHFQLTSADGSPALAFTALAMNREGYGNLCELITLARTRGAKGTYRLAPLDLEHPEAPLTHLRGLPDCMTILTPDFPANEQRLDAQIEWFAAVFGDRARVALTLHARAMDDIHRGAVERAAARYGVPVVATSWPVMHVRSRKPLQDVLTAIRLGRSVRECGYELAPNAERHLRSRLRLSNLYPAGALEETVRVARRCTFSLDELRYEYPDELVPAGYSPASYLREQTYIGAHARFPGGIPFHVQAQIEHELQLIAKLKYEPYFLTVYDIVRFARSQNILCQGRGSAANSAVCYCLRVTEVDPARGNMLFERFISCERNEPPDIDVDFEHQRREEVMQYIYAKYGRDRAALTAAVSTYRPRGALREAGKALGVDPIIVDRVAKAHHWFDSKADLLARFAEAGLDVEAPLNQQWAAFATALLGYPRHLSQHSGGFVISRTKLSRMVPIENAAMADRTIIQWDKDDIEALGILKVDILALGMLSMVRRALEMISEKRGEPFELQDIPPEDAATYAMLCEGDSMGVFQVESRAQMSMLPRLQPRCFYDLVIEVAIVRPGPVQGGMVHPFLRRRQGLEPVTFPSPDVEKALKRTLGVPIFQEQVMQVAMLAAGFSAGEADQLRRAMAAWKRKGGLEPYHARLVEGMLARGYDRDFAEAIFAQIKGFGDYGFPESHAASFALLVYASAWLRRHEPGVFLAALLNSQPMGFYTPSQLLQDARRRSVRILPVDVTISTWDSTLEGDTTAAPVRVGMSLIKGMRAEAAARIELARSVRPFADVADLARRAALDRHDLQVLAAAGALRSLAGGNRRDALWLAAAAVPGRDLLRGTERDDAAPALPQASEGRELVSDYRSMGFTLGRHPLELLRARLRTDRLLPAAELAQLRNGQFARACGIVTVRQRPGTAKGVLFITLEDETGQTNVIIWPMLLEQYRREALGASLLAVYGIWQTDGTVRHLVAKRLEDRTALLGGLHVESHDFH 103557..103844 hypothetical protein; bglu_4p0910 N/A MDREAANEASRLWVEAAAQAPEAQAVIALGWQVVSPYGYSHPSGWTIEDIRTNGKWQTLLWKGRHIHDRFRRPIDAARAHADLVKPGGREDKSSR complement(104391..105485) PHAGE_Escher_TL_2011c: type II restriction enzyme BsuBI; bglu_4p0920; phage(gi418487060) 2e-15 MSLAAIPSIALIAERLRQIFPEGTEHRNYVIREMAARTVYVMFYAGAIEGTDHWIRPSQVTGMSDEQAALVDDASRLAWVKLSLSQKNWRPATAWYAVDSREPVRDETLRSGLVSLRAVVERAGVATTSSKPTYALEADFARLFNSELTGEALDKAIAAWRESHLSKAAISRLRLVRHGATVAADAVKVTFPNGEIRNLAPGPSSAIAKAVIEVFAPRFLKHPAVLWLSESGNKVVARDEALANALGLKIDASKALPDIILVDLGADVGGADMLVVFTEVVATDGPINRERKIALTRLAIEAGFGEGHLSFLTAFMDRSSAPFKKSVAELAWGSYAWCASEPEHIIDFREGAPRKLSDADFRGE complement(105488..107281) PHAGE_Escher_TL_2011c: modification methylase BsuBI; bglu_4p0930; phage(gi418487061) 4e-25 MTTVTSQLVHIEGIDPCADRLTRYYACKAMARGYAEAKKSERTRLSHARAFCAVIVKAFWNVLCERNGTTLRIKPISLSLPVLAVDAHRLADDIGRLVADFPAEDAGYLIGSIYTVMLPSSLRSKMGAYYTPPPLVARLLDQIEAAGFDLARGTAIDPACGGGAFLAPLALRMVAHDGGASPEWTLRRLGKRLKGLEIDRFAAWMTTVLLEAAVLPLCVAAKRRLPDVVVVGDALRPRDHGQFELVIGNPPYGRVTLDEPMRNHYARSLYGHANLYGLFTDLALRLVKPAGILAYLTPTSFLGGQYFKALRQLLTDNATPFSVDFVADRDGVFDDVLQETLLTTYIRGIGDAPATVSTLIPEGLNAATIERVGAVHVNKEGNPWLLPRSANDAAFLNAIAQMPTRLADIGYVVTTGQLVWNRHKHQLRTVAEAGSLPLIWAESVTPNGFAFSADRRNHVPYINVETNQPHLVTRHETILVQRTTSKEQDRRLLAAVLPQAFLDRSGGAVIENHLNLVHSPVGMVPRVSLSTIVALLNSEAADRAFRCISGSVAVSAYELNALPLPTIQQLAELEQSIQSGAVKAMIERQIAIFYGIA complement(107285..107521) hypothetical protein; bglu_4p0940 N/A MELKELISSAHHLVEAREKKRITQTDMAQRIGVGYRTYLEYQRGTNAPLAMKALLNLLNLLDDAEIVRVVREWEESKG 107728..108456 PROPHAGE_Mesorh_MAFF303099: transposase; bglu_4p0950; phage(gi13475314) 4e-44 MKPKSLYHGHRFPSAIISQAVRWYFRFQLSLRDIEELLFERGVIVSYETIRRWCDKFGATFARQAKAARRKPGRTWHLDERFVNLRGEPWLLWRAVDEHGAELDILLQKQRDKTAAKRFFQRVLRSFPAPRKIVTDQLRSYLAAKAGIPELVNVKHVFVKAAARVNNRAENSHQPTRERERRMRGFRDLTRTQAFLASFGPIRQHFALKRHLLRASLYRKHLAVRFSTWRELTEVTQNPSTA complement(108587..108838) PHAGE_Ralsto_phiRSA1: putative bacteriophage gp29 protein; bglu_4p0960; phage(gi145708075) 4e-07 MMNLIRVGDDTDHGGKVETGSQTMQFDGRYVARKGDRVSCPQHPDVSPNVIEEGDTSFTDGGVPIARHGHHATCGCRLLSSLV complement(108851..109387) hypothetical protein; bglu_4p0970 N/A MKKTFSALILAVLVSASPCLFAKTQTQVDTSNHQYTSVKIAYATSELTNCSFQYSPVDFCDAKHVKAYQDSLKNDSPNFNGHYILLTHPEFKEYHQQAAVAIDTQTGVVYPLPIDAFSGYMHGRRTAKDEGKITYSLESNKVCISGAILVYRAFEEGNFCFEFVGDKFVGHHTEYMYP complement(110042..110293) PHAGE_Ralsto_phiRSA1: putative bacteriophage gp29 protein; bglu_4p0990; phage(gi145708075) 5e-08 MINLIRVGDDTDHGGKVETGSQTMQFDGRYVARKGDRVSCPQHPDVSPNLIEEGDTSFTDAGVPIARHGHRATCGCRLLSSLV complement(110306..110968) hypothetical protein; bglu_4p1000 N/A MNRLIRIFIGLCLLIGSEAAIAQAPQNEASPLLGEWRYVSTQHEGKKPYSTFVVKLHQSSGDQLVGSYCFITEGGRRIDCDPEGTNNLKGTISSDGLHATINFFSFFGAKNGTSDISINNGDLHWKVTRNPDGDFFYGPFDVYLTRDSKASGLRQVTASRAYLYAEPTIEDKSKSYIIKGDAVELLKISDNLKFWMVRYTAKDGKSIERWIECGTVNACP complement(110965..113808) PHAGE_Sulfit_pCB2047_C: secretion activator protein; bglu_4p1010; phage(gi472341758) 8e-15 MSQHHSSGPHTPPAKPATSPSPSSAPAPEPYKPLAWAFPFTPADKSDGSDPMTYMKALAAAEDGFYPLGANGMWHGGIHFDQNTAKHLKQDEGIRAIADGEVVAYRLDSKYPEQDYQDGRHALYSTGFVLVRHKLQLPPPPPPKPDASKQVAGQPATAPASAAPATAGKASTASTPAAAPASSQPRPGETLTFFSLYMHLMDWNTYQSASAQAKVAQVDAAKLNMAPMPYLEGERFYRVGDKANDSQDVPKPKAPAAPPRDLIGELIQSDFKIVPEPDAPEDDTANLPPPIKGIRIRESPNGKIIGILPKGSELTVSDTDEVAKAKPGWAKIKTIKSGTPAAAVVGGTPSPHAPYGYVYAKELDAVVNPQPLDSVVVLKQPYPVKAGDVVGQLGHYLRYTEAKLLPAKPTRPLLHLEVFAGPDLEAFIQKSRARAKELPAEKTFLEISPGARLVTELAEPDQKLQPGVKLVPVDTNAKGKWVKVQPKTAAPVHGGRHAKPTYTNSGAPVWVDGSLANTTTSAIVPGWKDFPLSFSNAKGPGADFRDVFRRVDLDKAGADSTVKDDKGRAWFLVTIGAKDGSTRQGWVCEQDHPLVRMCGPWDWPGFEMIDNSSIMPVDMLKRYIHVTDQYLADESKTEFEASAATVNAGPLITNLEKAIDTDHDGKVTALELKHAQETPWMAEALSHLVVRCESEWGGGLGKWEALSPLMKKLLWLWKTEIERIGKLQWWEQVTSVEGFPKEPNPWHFHPIGIVGNFAQKSEEGCGDCAARFKKISKIILNHEGGIVDHKNDKGGLTNRGIAWPTWQKYAKEDLGVEPTVENLKALTESQAEVIYLKRFWEPKGFCQFRDDRIALMTYDWTITSGGAVTQIQKMLNSKYGAGVGEDGGLGPNTIKAINAVQDQDQLLQDIAEIRRKYYRMLVDNDSSQVVFLKGWLGRVDDCLQVKL 125421..125433 attR N/A GCGCAGCTTGTCG