gi|226349831|ref|NC_012521.1| Rhodococcus opacus B4 plasmid pROB02, complete sequence. [asmbl_id: NC_012521].244997, gc%: 64.21% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 63094..63105 attL N/A GATTACAGACAC 73853..75853 PHAGE_Strept_2972: tail protein; ROP_pROB02-00700; phage(gi66391777) 6e-09 MPARRSRTRRTVALIATATVVVGVALTAPAIANAAPVGCVSTFNLLIPGTWETNEHADPNQPVGMLAPVAEAIRAQNGARAQIYTLPYMASAFDNGHTYADSKLDAVSKATAVLKSYADKCRGAKITITGYSQGADAAGDLASAIGNDQGPVDADQVLGVALIADPGAGTKGAAPVGPTTSGEGIAGPRSQGMGTLSGRVASICDPKDLYCSIRKGANPFLGSLGSILSKTPGNTSTGAGADGGTAAVAHALTSDFTDADLPGLGSNVDALGQQLSGNGTGGSIDVNQIADSATSLSKTLSPLVDLLQSGAANTAATSKLAAAPVGTPENAAAQVLTTASHADLGGALDSVATIANTAAKLANNGATTLPATAPEISQLAGTAASLGSQIAPVAATPADALSSASSVLSVLKPKVVVDQALNVVTGVTALDIPKILNNLIVLPQRIAAGDVRAARDTARELNVQFEPIVKMAAGVDLKWVSQILAIIPDPSGYTQIAALVTSILGNVDVIKLATIAGQAQEIAWAAADKLFPPPGVLPDPVGAAAQTTALIPLGLDLASVAANMLTGKASKTDPALLGKQTNPVGNAITTQAQTLDLAGLAGSVSTMTQSQGAEDLAAVVGEGLNAASFFASGAHQSYQNLVVDNAGRNAIQWVSDWLNLQITRAA 76081..76374 hypothetical protein; ROP_pROB02-00710 N/A MARRTHRPTSCWVSCPHCGGKRTYFTRRTARAARTHHEKRHGLAIYPCPHRHQDGDAGMFHVGHRPEGLGRGHIDRDTLADNQRAALQGRAAGGGAR 76371..76715 hypothetical protein; ROP_pROB02-00720 N/A MTLMNATGSPTPPISLDVGGRIRFGLEPRRPYTVRALSEHFVVCTRPRDFATTGEFVYTVIDWRNGIRGPVNGQSADVSTDERCRDLLDDLEAGRWEISHRNRVQLDIIESDQS 78349..79653 PHAGE_Burkho_phi1026b: gp59; ROP_pROB02-00730; phage(gi38707949) 1e-56 MVSESTLTTRAGSTVTRSARRAIVAASFGTYVEYYDFVVYGYVAVYIAHAYFPSDNPLVGLLLTFGAFAASYVARPLGAVIFSPLGDKYGRKTVLAVVILMMTLATAAIGLLPTYAQIGLFAPILLTVLRVLQGISAGGEYGGATSLIAEFSPPDKRGFYVGFIALTTGLALLTGSIVALSLTRMLPEESMLSWGWRIPLLLSLPLGLVGLYIRFKLEETPHFAALSSQEKAVNKPLATTVKRDYKTVILTIGLAATNASLLAVYFIYMPSALKQFGNFEAADAQLITFSGLAAYCLAIVPFAKLTDKVGRRPQLIASTIALVLVIYPSFLLVSHGSIALAVLGMVIVTPLMAANVTAVLPLLTELFTTANRYTGLSLGWQIATTLFSGPTPVVLAALAGAAGATMPAFYAMAIVALSACAAFAVRETFDTPLQ complement(79907..80173) PROPHAGE_Escher_CFT073: transposase/IS protein; ROP_pROB02-00740; phage(gi26248359) 4e-11 MPGEAASALFQVVAQRYLKTSIIVNTNRSVGEWGEVLGDTTVAAAMLDRLLHRSVVLNLDGDSYRLRDHHARAENLRKATTATRQPLQ 80391..81590 PHAGE_Thermu_26: phage XerD-like integrase; ROP_pROB02-00750; phage(gi157265417) 1e-11 MSGTRRRTGPLSPFVENYRDLLRGLGYRSETIRGMVKVLGQLDRWMISNEMSVSNLDATQMDCFLAYRRADDYRQSPHRRGLRLLLDMLIEMHVVAPLPDDPLTSTEVLLDDYRRWLIEDRGLAEATVQRYERSARKFLLTGSDAGSVDPTALTGSDVSGYLLAEAGRCSVGAVKGRVAEMRALLRYLFVHGMTPTLLSGAIPPVAGWRETSIPRYFARDDVDALLDTCDRSTALGARNFAMLMLLSMLGLRCIEIARLELDDIDWRSGHLRVRGKARRLDTLPLPHEVGDAVAGYLRDGRPHTTDRHLFQTYRAPIRGIPPDLLSDVVRRACKRAGLPPAGAHRLRHSVATTLLSEGVALADISQVLRHHDLATTAIYAKVDLASLRTVAQPWPGALS 81587..82534 PHAGE_Achole_L2: integrase; ROP_pROB02-00760; phage(gi9626516) 2e-05 MTTTENPTSLRMHLTQYLLLRNRLGHELAYAARLLPRFVTYLEDLGHSTVTIADALAWCQQPPSPPGSSVWPRRMGAVRGFARYLSGIDPATEVPPIGLLPSRRRWRPPFIYSSDDIAALLGAAAALPSPRRAATYSTLFGLLAATGMRVGEALTLDSSDIDWDDGVVLVRESKFGKSRNVPLSDSTTEALARYASLREGFDRTPGNESYFVSLTGRRVIYESVFEVFADLRRSSGIGRQSTVTPRIHDLRHTFAVTVLLQWYRDGGDVAARLPRLSTYLGHRDPRSTYWYLSAAPQLLALAAERLEPTLPQVNS 82531..83520 PHAGE_Mycoba_Porky: gp51; ROP_pROB02-00770; phage(gi194303347) 2e-11 MTAIAPTVQSFFLERLSTQRRASEHTIAAYRDAMRLLLAFMEQRTHRAPSRLDWTDLDADAICAFLDHLEKDRANSARTRNARLTAIRSLFSYAALRHPEHAALIAQVLAIPPKRFDKAIVCFLDEPEAAAMLAAADRSTWAGRRDHALMTLAMQTGLRVSELLGLNCGDVVTGTSGHVRCVGKGRKERSVPMTESVRSVMNVWLIERAGQRDDAAFCTRTGRRLSVDAVQRRVNIYAAQARQSCPSLVGKHLSPHVFRHTCAMTLLHAGVDTTVIALWLGHADVRSTTAYLHADLAIKERALAHLASSTSPPGRYRPPDQLLAFLEAL complement(83490..84182) PROPHAGE_Escher_CFT073: transposase/IS protein; ROP_pROB02-00780; phage(gi26248359) 8e-20 MNTTPAADTPPAPNTAAAASLYQRLRGHLAVLKLHDAAEALPAVLDRAQKTNLSMTAALEELLAIEVDATEARRLAGRLRFACLPTPASLEDFDHDAAPSLDRKLIAELGTCRYLETATNILLVGPPGVGKTHLSVGLARAAVHAGYRTYFTTAADLAARCHRAAIEGRWATTMRFFAGPTLLIIDLCRPRNYADAGRRSGWAALSCNDLQYFESECAQHIHSASRNASS complement(84179..85558) PROPHAGE_Escher_CFT073: transposase; ROP_pROB02-00790; phage(gi26248360) 1e-06 MLTWEDDVEVHALRKRGWSISAIARHTGRDRKTVRAYLNDERTPGVRKRREPDPFEPFVDYVTCRLSEDPHLWARTLCDELEELGYRLSYPTLTRQIRDRGLRPVCEACATATDRANAIIAHPAGEETQWDWVDLPNPPASWGWGGMAHLLVGSLAHSGRWRGILAPAMTQPHLVDGLDRVSRRLGGVTKVWRFDRMATVCHPESGRVTASFAGAAKHYGVAVAICPPKAGNRKGVVEKANHTAAQRWWRTLPDDVTVEQAQQRLDEFCRLRGDTRMRATADGKASVATVAATEPLTALPATPYPAILTEPRTASRQALVSYRGNRYSVPPELASAQVTVTRVLGAEVIDIVTTAQITIARHRLAPDGAGVTVRDHGHVYALEQAAMAAAGSAGRPHRRKERIPPGPAAIAAAEALRRGTSESNMTTSGAAETSQMPTPPTVIDLSTYERAARGRNTLT complement(85725..87308) PROPHAGE_Escher_CFT073: transposase; ROP_pROB02-00800; phage(gi26248346) 8e-27 MRALLPHLVGVAVAGVRRVGSTIRIAAEPKGDGGRCPRCDGESARVHSRYRRQLADTAIGGHPVMIDLRVRRFFCDTIDCTAKTFAEQVPGLTTSRSRRTPVLGAMVTAIGLAVAGRAGARLAARLGVAVGRDTLLRAVRALSDPKVGEVSVLGIDDFAIRRGHVYGTLMLDMVTSKPIDLLADRTADTVADWLKKHPGTEVVCRDRAGAYAEGVRIGAPDAVQVADRWHLWHNLAEAVEKTVTRHRADLRLPDEDADQVSVVPDGIDEIVHAEVEPIDGRLVTRTRERHAAVQQLASQGMSISAIGRKLSLDRRTVRRFARATEVEELLTKTESRASLLDEFKPHLHERFNAGCTDAARLTREIALLGYRGSDKTVRRYLQPLRSTLNPLPSGPASPSVRQATGWLTRHPDRLSDDERTELESLLERSPALAATRDLVQGFAEIMIERRGRDLGAWMTAVDTNGDRALRSFVAGLRRDLDAVTAGLTLPYSSGPVEGHINRIKMLKRQMYGRANLDLLRKRVIHTV 87467..88447 putative transposase; ROP_pROB02-00810 N/A MRKSPQMNEVLPLYLHGLSTSDFGPAREQFLGSGAGLSAASITRLRDPHQQSGSGDALLRPRPLRSVRATFTAHGSSKPQGRHGLLVPPASLKAASAGGVHKACRVPLRRVISPVVGEVVGSDCLPDHAEPPAFPFIRGIWRLIGREQVVSAEWTAAVLPSEQAGVVAVERWFDLAPPPDPIVTEVGVVWRRPSRDRGVTDDGSPGELDQVGDDLTVVATRVVGIAEHPLVVPELVEPAEVAICNPPLRLAGVAAAGPPPCEPPHVVVQRGESLAGHHAPVVGGPAPDDGVEPGDDRQRVRATHTAHLVGEPTMDSLDRIRIRLDE complement(87692..89509) PHAGE_Vibrio_VHML: ORF37; ROP_pROB02-00820; phage(gi27311204) 4e-05 MNLRGKLDTDEVNGPRDVVLDWDAIDWRAHEQNVVRLRRRIFKATREQDWAAVRSLQKLMLGSWSNTLVSVRQVTQRNAGRRTAGIDGETALSPEARANMAVRVHESRSSWEPVPVRRVYIPKAGGKRRPLGIPVVMDRCHQARVRTALEPEWEARFEARSYGFRPGRSCADAIGALYSTLNGSRAKRVWILDADLSAAFDRIDHPRLLDTLGSFPARELIGKWLTAGVIENGRFASSEEGTPQGGVISPLLLNVALHGLEEAAGVRYLKAADTLDARSVPGTPVLVRYADDLVACCHSRQQAELVKDRLAGWLAPRGLAFNEDKTHIVHLEEEGFDFLGYNIRRYRRGTRPAKLLIKPNSDAVKRIHRRLANEMRRMRGSNALAVIARLNPIIRGWTAYYRGVVSSKTFASLDYHMWRLTWRWARRRHPGKPKWWIADRYFGRFHKFRNDQWVFGDPDHPRGDHGEVITHLVKFAWTPIVRHTTVAGRASPDDSDLRDYWIRRRRKVKPPLDSYNAGLLARQNGRCPLCGDHLLTPDQPPDSPDEWERWWLGVVRQAIAADYLTHHGRDDAAKGNSTRLVHASCRRSLQARRRNQQSVTPLRLA complement(90177..91229) PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfB; ROP_pROB02-00830; phage(gi24373866) 2e-12 MIDHAIAELTPLIGVRHACTSTGRAHASYYRAHPKHAGIQGTSPKIPEVGPANASGRESAQPRALSNAERVRVLEVLNSQRFADMAPAQVYATLLDEGMYLCSESTMYRILREKNQTGDRRRQATHPPKVKPELVAHQPNSVWSWDITKLHGPAKWTYYYLYVILDIYSRYVVGWMIAPRESKTLAERLIAETIREQNIGRNQLTLHADRGSSMTSKPVALLLADLGVTKSHSRPHVSNDNPFSESQFRTMKYRPDFPGQFDSIEAARMHGKEFFDWYNFEHRHSGIGLHTAADVHYGRATEVRRRRGIVLDTAYAAHPERFVRNPPEPPALPTTSWINKPRTEEENPTH 91700..91711 attR N/A GATTACAGACAC