gi|192288433|ref|NC_011004.1| Rhodopseudomonas palustris TIE-1, complete genome. [asmbl_id: NC_011004].5744041, gc%: 64.86% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 691459..692937 PHAGE_Feldma_virus: putative sensor histidine kinase; Rpal_0639; phage(gi197322366) 3e-06 MQAADKQPETHAWRRGLEPKIGLSGKLLLLTIPLILIAEILIYVPSIANYRLNRLNDRLAAANTAALVLDASPSGRVPDSLAQQILDSIEARAVAIKMGQQRRLLASSNLPTKIDHVVDMRNVTPWGAILDSFVVMLESGNPAIRVVGPAEGNAEFIEVVIDAAPLRNAMYRFSSNLLLVSLTITSLTTGLIYLALHFLFVRPMRRLTANMVNFRRDPESPASIVVPGPRGDEIGLAERELSDMQRDLVSMLHQKSRLAALGLAVSKINHDLRNLLASSQLLSDQLSSVPDPRVQRFAPKLVRSLERAIAFCQSTLSYGRAQEAAPDRRSILIEPLVNDVRETAGLADEASITWVSAIERGLTIDADPDQLFRVLLNLVRNAAQALEGQPRNDANLQQIRITGRREGSVTVLEVSDTGPGVPQKARDHLFEAFHGSVRAGGSGLGLAIAAELVRAHGGEINLVEGTIGATFRISIPDRPVDLHSLRSARARA 693187..693263 tRNA N/A GCGCCCGTAGCTCAGCTGGATAGAGCACCAGACTACGAATCTGGGGGTCAGAGGTTCGAATCCTTTCGGGCGCGCCA complement(693685..694212) hypothetical protein; Rpal_0640 N/A MAFWHRTAVLAILGLLAAGGSADAQQWSAEAMKGVDEVLQGRARSLPEAKEDVSATRATASPQFDFKAAVAEIRAAERVVIAALQTGDSSELRSIESKLIRLETRILEAKPGDNRASCGLAAGDLAAVGSSMRRVAERDEPARHLVAAETIEAAYRRHLAECERALRASDRRARR complement(694225..695016) PHAGE_Haemop_SuMu: transcription regulator; Rpal_0641; phage(gi418489036) 6e-17 MSVRQDKSVPRQRREKAAEVRIGEFGIDKARYLDMRAAAISKKLPNSSDLSLQERLVFAWLVLIFEHEDNEIEKLIGRSIKQYWRYVEGQDVPLSILLRICEVTGIPESYLVLGQQPSEDKFVHKERLETVFVRLLAFQASAGSGASVREDEERTVPFANEALERAGVRPQNARLLYAAGDSMRPTIEDGDPLLADVGDTDIIDGRIYVFSIGDQVLVKRLRRLGSRLLMRADNRDLYPDEEEVPMIEPVRIIGRVKWVGRSL 695097..695396 PHAGE_Escher_D108: Ner; Rpal_0642; phage(gi281199646) 2e-06 MRRRWDRHAIKAAVHRKGLTLVGIARKAGLEESACKVALRRRNWRGEAAIAEALGLHPSALWPDRYRSSAPIYRRNRNHVRACVASPNDVEPLAGGAAR 695393..695665 hypothetical protein; Rpal_0643 N/A MTPNLSIPNRCFDIPPVRIAPMPQAERDAALVAMWQASRGLPMAAREAVLARYAPPSVLSGSTGAASEAGEARHLRQVVGSEGSSRSSRD 695730..696545 PHAGE_Rhodob_RcapMu: ParB-like nuclease; Rpal_0644; phage(gi356870851) 1e-16 MTRQTIKIADIDTTGRLRELRPDWVAAIAEQVQAGEVLPPIEVAKKPEGGWRLLIGGHRVAGHQQAGRTEIEADIAAFSADDEAACRMREIKENLVRAELTVLDRAVALAEWKRIYEAENPLPKRGRPAAGEMIDNLSKIFAERFSEAAARALGVNERSIQRDIEIASIDEVVRRELALHPIADNQAELLALARESAARQRKIAARLLDADSGITSVADAVAAIDKTPPPERAPAWEKVSNTFSKLKAAEQYAFFDAHADAITAWMKSKKA 696550..697002 PHAGE_Rhodob_RcapMu: conserved transposable prophage protein; Rpal_0645; phage(gi356870852) 3e-13 MAPRRRDTATIDLFRDYEPTPVVRRFEPEEIKAWSAARRLARAISAALDGFNRSDVAAEMSEQLGETISKATLDAYASPEKPHAIPAHRLAALVSATGDERLINALLGDLGLIAVPAKYEALLKRERARELKEKLEREEQAADAQWRASR 696780..696792 attL N/A CTCGCCAGAGAAG 696999..699173 PHAGE_Rhodob_RC1: integrase; Rpal_0646; phage(gi472339716) 6e-131 MKEWCTARELAEAQLPGLPSTESALIRFAGREGWNDSLAYVRRRSGRGGGLEYNISLLPPSARVEFERRHRAILAPQPVEASTAAQPAENLSERAAKERDARLAIVAAFAAFGRGQRLGNASRSKIFVDAYNGGTLIIDAWIREIIPHLSPRSLARWVKAKREGRTNNLAVDRAKARKGKGVLDIACDGKVRTYLLALIAHNPHLSAQHLRALIRSEFGDQLVMPSGEVVEVPPVRTLQHYVAKLKDEERVALTKLSNPDRYRSTMAPSGVGTYRWVREPNTLWMIDASPVDALCVDGRHSIYAAIDIATRRTKLYVSRTPRASAVALLMRKAIIAWGVPETVKTDNGSDFVAQDTQRLFANLGIEPELSDKYSPAQKGHVERVIKTFQHDCATLLPGFVGHNVADRKRIEDRKGFAARLGEDTAETFGVSLTGAQLQAYVDQWIDLVYEQRTHSALGTSPMLAAAASKKPIKTVDPHALDLLLMPVGGIRVVTKFGIQLDRFKYVINEALPGDRVLVRQDPNDAGRIIAFDADSGAYVGDGICPELAGVDPAALLRAKKEFTAAHLAERTRDVRREIKKLTTGPALIERMLEVARRDMPNVISLPKREEKHETPAIAAALDAMVPKEAPPPSSDVLAMQAKLIADETVVPLRSEETPHQRWQRALDVIARMQAGDPVTSEEAMWLGGYRTGPEYQARALMHGDPMETEKPAASWTDATGQQSL 699185..699955 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_0647; phage(gi472339715) 3e-36 MTATNNVVKGGQVPLKNVASFMTLTMRLQNRSPHLPGFGVFFGDSGLGKTEASIYAQNKTNAVRVEIGETWSIKKFLQEVLFELRRPARGTISDLADQVKAALGDDPSRPLIVDEADKLLRKNGLLEIVREIGDVAGCPVILIGEEMLPEKLAVHERFHNRVLDWTGAEPCDQDDVEKLAKALCGGITIAPDLQAEICRRSAGRARRIVTNLDQAIVIARNKGIKTVDLAAWGGAKYFTSTPPGARLSSAAKRRSA 699957..700598 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_0648; phage(gi472339714) 2e-14 MPVPSTIITLPLSVPISTGQEAIWQIIRDLDKRGPWAVADIDSSTVKSVITTISEYVARLERGGFIEVVGTKPVPGRTLMKANLYRVKVKTSEAPRVRRDGTPAPPSAQQQMWRAMRSLQQFTYRDLARIATTDVLKIGDVTAKTYVQRLSDAGYLQLLQPAKNSGGLAIYRLNRKMNTGPLAPQILRTHFVFDPNRKVVVGDPSLADNAEAV 700598..700984 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_0649; phage(gi472339713) 3e-20 MAGVVKRDPLQVAKDAWGNDLPDWVEALANEARATSGEAAAGRIGYSGAVVSSVLANKYKGRLDIVEARVRGALMGETVGCPVLGDIARDRCLDEQKRGFSTSSSVRARIYRACRAGCSHSRIGGDRS 700981..701607 Chromosomal replication initiator DnaA domain; Rpal_0650 N/A MTIVAVAHRHISVRLIIYAVADSFGVTVQDMRARRRDGKVYHARAAACLLARELTGRTYPQIGRVLAGRDHTTIIHAVERAREMLASDDDFKLAYTAAKMAVETIAATKLAELLRDDEPSVVAARICEYPSQANRVSTWEIISMAARLVALEELAADAFKLLADLDLLVEQPASALELRGPLTSRITSVAESLASLGYANQPEGAPNV 701600..701845 hypothetical protein; Rpal_0651 N/A MCDCRSEVNQHLCAHNTRLSTAFSCVENRLVGRLIVATEKIDSRGKGRPLIVTPSYCPFCGEAIDGGANKIIPLSQGEAHV 701838..702488 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_0652; phage(gi472339708) 2e-64 MSETTTPAIDDGAIEIGGKSFMHDSSGRLVPLDLIKPQHLLEDQTVRKIVGYAQSLSDQISRFRGHTFDDVTSFAELLAEQYGAKIGGKKGNVTLASYDGLFRVVVQVADQLAFGPELQVAKSLVDACITSWSDGARTEIRALVEHAFQVDKEGQINRAALFHLRRLQIDDDNWRHAMAALGDAIRVVGSKQYVRFYRRANRAARWEPITIDLAAA 703103..703315 hypothetical protein; Rpal_0653 N/A MPWADRSLPPERDDDPPPTTPAPLDALQAERLALISQVRRGVHSKRQRQLVQRISALTLAILAGNTGPRR 703312..703539 PHAGE_Pseudo_KPP10: hypothetical protein; Rpal_0654; phage(gi327198142) 4e-13 MTDKPDGKAADGQALHALKRDAERYRWLRERDVETIDMGGVFVGKTPENVVLNGIDCDAAVDAARIAEQEPDAGE 703542..703742 hypothetical protein; Rpal_0655 N/A MREYGFKTSTSIDRVRNTVLISITFEDERIAEAATDLLRKRQQHGALTLDLQRTKFVEIDGSCVRQ 703739..704167 response regulator receiver protein; Rpal_0656 N/A MSEVVSKAYHEATVRTLHQQIETMQDTIIDLRRKLLPQKPRFPTQWKLSPHQDRMLAALVDNAPNAVSHERMMIAACGRTGGDILPNTLTMHVSLLRRKLLSLGFGRIESHWNVGYFLRDDHAAAIKLEAARVLGSSREMAS 704164..704916 PHAGE_Rhizob_3: p096; Rpal_0657; phage(gi195546626) 3e-14 MKRPRGSSAVMAQRQAITAEQIEADPRADLDFFPTPPWATRALLQHVLHIDAARGRHLSCWEPCCGEGHMAEPLREVFGTVYASDVYPHGYGEVGSFVDGGGLDIGDVAQCPFRPDWIITNPPFALAIEIARRALREARQGVALLVRTAWLESEQRFAFFSEAEPFRFAPFAERLAITRYAWVPDASSATAYAWLVWSCPTWSAASGSPRFETKLIPPGCKRSLTKPSDLRLAEPGRAPTVPMEWRGASS 704913..705521 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_0658; phage(gi472339703) 2e-29 MKAASAAADVTAPQIAMIHVLAKQAGLDEDCRRDAIERITGKRSARELTAVEGSAVIDHLKSLSKAADIDGPYGKKLRALWISGWHLGVVHNRTDKAMLSFVERQTGIERTRWLRAAADARKAVEALKLWISREGGVQWPAGDDPIAVRRAVIEAQQLRLAAFGQSFQVQHAATDSAADLDKVIARLGARVRTAQADWATRY 705524..705700 hypothetical protein; Rpal_0659 N/A MAKSTKDELEFQLKWLRNHNEADRAFYFSQLAEKHGEGFAAAVRKEFERQQQEARHAR 705746..705979 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_0660; phage(gi472339701) 4e-05 MTKLAPMRVSDHALLRFLEKAGGIDVELLRRAMSASIERATAMAEKLGVDEYAIVVDGFRYIARCGTVTTVQEEPRR 705976..706386 PHAGE_Rhodob_RcapMu: putative transcriptional regulator; Rpal_0661; phage(gi356870865) 3e-05 MSVSWLPEVLAEIAEVAGLDAALKLAESHGGTRKRFPAEMPKGRHWLSECVGAVAAAQICAYFRQGSGSGRFRGVYLLIPRGPTGTIAAARRRMAQALEEGKSAAEAARVAGMTERTAYRARARSRGRDDKQGSLF 706503..707897 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; Rpal_0662 N/A MPIEIKTHRIYRDGKAVNFQQTKNIGGPIVPKVIVLHDTAGHLHGRDSIVWLRGGPGQSQNSSAHVVIGRDGTITQLAAFNVKTWHAGISNWRGRANLNGWAVGIEIVNPGGPLRTLGNGRYQGIDLIDTKADPSLKVRPGVFPPLTPDGKAVPRTAGYWLEHSPEQIDAVVELCRALVAAYPTITEIVTHWMIAPTRKVDTNPLFPIDEVRRRVWPARLVSPVAKFADLDDEAVDAIARSAPGEIEQHEFPPRPGSELEPDWTASASESAELEDDGNASEHPADLPAPTEPHPLPKPLVEFVQQRLRALGYYEVGNIDGDFAGRTEDALVTFKRHNGLPPTTDVDDATLRALADASPREIGDARARATPKDVSKIVPAVRQAGRSKLLAWLLGAPSAAVAVLQGAAANVSSVMSELSPIMGWLQAVPGWVWALLIVGIAAGIWWSARKAEADTVDAYRAGRLT 707910..708122 hypothetical protein; Rpal_0663 N/A MDVFPLIMAFVGIIVAVITAIIIAIRARWVRDTYGPDFGIVDKVDAVMTPELWVAASIAIVLILVGAGTP 708119..708517 exonuclease SbcC; Rpal_0664 N/A MISLAALAGFAARPIGKAALIAFGLAALVAIGGLGAWRAAATIRAMISEAAATAKAERDAHWRAEIAEANAKVARAEAEQARAAMAAESSIKAAEKGREDALKDLEKQNAALSDGDRRCLGRARVRLLNQTR 708444..708719 hypothetical protein; Rpal_0665 N/A MRLLVMAIVGASAALVSGCSTKPADEPTVLLSMTRPTVPETAKQKCDDPVPLPDRDLTERETASAWGRDRSALRTCEGRRAAAVEAIEPQQ 708716..708937 PHAGE_Burkho_KS10: hypothetical protein KS10_gp07; Rpal_0666; phage(gi198449269) 6e-10 MTDQLDEAQALEERERDDCIARAAGQIKGHGATHCVVCGEPIDEARRKAMPSATRCVDCQESRERWSRSHRGR 708937..709392 hypothetical protein; Rpal_0667 N/A MGMSWVEFVSWAKDIWWVLSAPVAAIGLAGMYYLRGQFPTKTTFDNQIEAVTTSISDLSKKIDDNEKKTSERIVKSERETSERMAKLESDVRQLPGRTEMEHLSDRISRVETQVAASVETIKGVEKTANKIDRTLEMILGHMLDEKREKIG 709389..709700 PHAGE_Escher_D108: hypothetical protein; Rpal_0668; phage(gi281199669) 2e-06 MSDTLAEVFDKDRRLVLLRLLAEQDNYELSAPLLTKAAQELRHRVYPDVVEADIVLLDQHRLVTRSEIELSGRKMTIATLTKLGRDVAHGRPHPMVARPSPKD 709705..710283 PHAGE_Pseudo_B3: small terminase subunit; Rpal_0669; phage(gi56692598) 5e-09 MANRPSSIDRLPQEVRDWIGRLRDQGCTIDEIITKLRELDKDAVPSRSALGRHLKKAEEVAERLRKSRAVADVIVRRLGESDPDKTTRMNIELMHNILFELATQTEGEDGEPVTFDPMQVMLLAKALDHLGKASKDDVARTVAIEKRAAEKAKAEALRQTEKAIAGAAGTDGQVDGAALLKKIREDIYGITT 710280..711605 PHAGE_Entero_Mu: putative portal protein; Rpal_0670; phage(gi9633519) 2e-13 MSAAAVPLYGFQRTWFLDRSRFKLGMFARQTGKTFTTTLEITDDCFEAAVQSRRERWVILSRGERQAKEAMDEGIKRHCQAYQLGFDAQEFDWQGQAGSYKALEVTLPHGSRITALPANPDTARGFSSNVFLDEFAFHKDSREIWKALFPVISAGHNLRVTSTGNGKDNKFYELATGKDDVWSRHFVDIYKAVEDGLPRNIDELKAGINDDDAWAQEYELKWLDEASAWLSYDLITACEDPRAGDPSGYRNNPCFVGRDIGRRNDLHVIWVWELIGDVLWERERIEQKRATFAAMDAAFDDVMTRYRVARACIDQTGMGEKVVEDAQAKWGSVVEGVLFTIPNKLILATAGKEAFEDRKVRIREGDVALRADLHKLRKVASATGAPRFVAERDDDHADRTWAAFLGIHAAGDGVPAYDGYQSARPDAGSNLFETSGGRALW 711599..713191 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_0671; phage(gi472339690) 4e-69 MVSILGPDGNPVDTSLLSKEVATPTVIGVRAVHHERVATGLTPERLAYVLHQAAIGSARDYLTLAEEMEERYLHYASQVQTRRLAIEGVEPSVAAPNGVPTKIVDFVHELVEDPNFHDMLGLLTDGIAKGYAVAEPIWEYERKALRPVAYKWRDQRFFQFDPVSQTELRLAVDGSSEGEPLAKPTFIVHAPRSKAGIPIRRGFARAAAWAFMLQSFALKDWSAFAEIYGIPLRLGRYHAGASEGDKKALLQAVRSIASDAAAIIPQGMQLEFIETKGQRGEAVFGSLLDYLDKGVSKLVVGQTMTSDNGASMAQAKVHNEVRLDIQRADGVQLSNTVTRDIVEWAVAMNFGPQDVYPRVVLPVAEPEDTKAMADGVAKLVPFGLRVKQSEIRGKFGLSEPSDTDELLTPQRQTSTQHEIVAANDPKKAARLSAGDCRCPSCGGTRSATLAAEPNAEADELDELVADAMADWEELVDPLLAPLREAVARASSFDELLAMMPELAAEVDGSKLAEALALLTAKARGLGDVKD 713194..714375 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_0672; phage(gi472339689) 2e-31 MRLTRRQTLAMLAQLAAVKRGFQTPPEILDYFRDKNLKPAFSWLDVWGEEHAHAFTVAGVTETRVLTEFKEAIDKALTAGTGFEAFKADMQARLTPRGWWGPKVVSDPTGKWKDKTVDFTKPGRLETTFWSNVRSARAAGQWNRIQRTKESRPYLVYVRSVAERKRPEHLAWVGTIKPVEDSWWRTHFPPNGWGCKCSVQQLDQEDRDAYLAQDGYSEDAPDFGEVDYVNRRTGEVTKVPRGIDPGWQTNPGLARAQTLVTQLTETLAEAGGLRAKPTIAKLWQGNWPKAMAKLDETVQLPVAASPRVAEALGADTEIVTVANELVAADIAAGKVADAGRYAIVQRIIDAGRLISGARNGLSRVRAMIDGKSWTLTLRKGDDGSVAVEKLTSR 714647..715609 PHAGE_Rhodob_RC1: I protein; Rpal_0673; phage(gi472339684) 3e-13 MTTLAVDPTLSAEGDWPRWVQVTPRGEVQVRDGRRFTFEPERLVARFKADAVDVPADLDHAISLKAKNGDRADAVGWISQLEARPNGTWALVDMLDAGKEALAKKTHRYISPTFHHTAGLATWLHSIALVAAPALAMPAIASASLTTPQEPHMPNEIAKALGLAETADEAACLSAITTLTTGTVAKAVHDQALANLAAATGRVAELEAQIATRDKADHEAKVTATLDAALKAKKIVPAQRDKYASLCATPAGLAEVQALLDVTPATLQSSGLDDRAADTGDVAQPVDLLAKANAEIEKAQKVGIELSLADAIVKVNQGIA 715609..715998 PHAGE_Pseudo_B3: hypothetical protein B3ORF37; Rpal_0674; phage(gi56692606) 4e-16 MSAELIKSFVADAAIRGYRICAFHASKQAAIEGASNTAALIGVSTSTGAKAAGVVDVIQSGLGEVTLGGNVGRGALVTSDDQGRAVVVPAPAVAAKTVRTIGQVQASGVEGDIVPIVLAPGAVYVPASS 716008..716084 tRNA N/A GGCGGGGAAGAGCAGCCCGGTCGCTCGCCTGGCTCATAACCAGGAGGTCCGCGGTTCAAATCCGCGCCCCGCAACCA 716133..717095 PHAGE_Pseudo_B3: capsid protein; Rpal_0675; phage(gi56692607) 1e-73 MAVNRPFPVNPALTAIAIGYSNPANTLIADQVLPRVPVGSESFKWQEYSLSDGFSVPDALVGRKGRPNKIEVGASEKDDSTNDYGFDGETPIGDINEARRQREAGLSNYDPRARLAAVLTNKLLLAREIRVAGLVHNSASYAPGRKVVLSGTSQFSDYTNSDPIEVLKAAIDGTLIFRANTLVMGQSVWSKLSSHPVLVNAIRGNLTNKGIITREELARLLEIKEVLVGASYLDSAKKGQDPSLARVWGNHISALYLDPAATNTDGVTYGFTAQVGTRIAGSIADPDIGLEGGERTRVGEKVKELIIAKEVGYFIENAVG 717108..717407 PHAGE_Helico_2: hypothetical protein; Rpal_0676; phage(gi370703036) 4e-06 MANETDDEKAAAAKAKAAKAKADKEAAEAKTKADAEAKEQAKAAKAAERAAKKTMQDHVVTREVMHDGELCSAGDEISLTKAQHAQLFAVGAVEEPWAD 717511..717795 hypothetical protein; Rpal_0677 N/A MSNAAPDFNRANFVDGQDAYKSGDTVLDVIEHVVAEAGSGPAGAANALSFVAGFLDGVIADIRRASKPVTRTELHHVGAVLMPQRADRPEEKIR 717792..718019 hypothetical protein; Rpal_0678 N/A MTAVRKPRVPSKTPVTRGAIAEAATAACRRVYKGECACEKSGASDPCNDMRLVAVAVLASAAPGVLKELIAAERS 718019..718492 hypothetical protein; Rpal_0679 N/A MTTFAALADVLARYPAEATVLAADETTRERDDSRIEASLVDATAEVRAILAARYTRDELERIDDDSRGILRIYTIDIALYRVALSFGRSSERVKERYDVAIARLNAIGKGTAALTFDGPGGGGTGSAGAQPPGSVSPNEAIVIANERVMTRDRLRGW 718492..718986 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_0680; phage(gi472339688) 3e-07 MAEGVLIEVDITDLTSALARLGGLDNVDAEPLMSDIGARLEFSTRERILSTKTAPDGTPWAPNLAGTSILMQSGQHLLGSIAWTASATETEVGASWEYAHVHQNGAVINAKNAKFLSFVVGGRHVSKKSVTIPARPFVGISAEDEAKIDRLAIKFVDRQLGGGQ 718983..719570 hypothetical protein; Rpal_0681 N/A MIEPATIAQRLDRAALVIFLDAVEARLKVLFPDVTVRQHPGRIDVSDIIEKDIFNPPMLAVAAVRWKFDGDLDGSWNLDVEVAVYVITAETVVGTKAVPRQEVAHALSLGVLQILGDIDGHRWGLQCGISSPEKVEARPLFTSETFAKGAAYYVVTWTQGLYTLGGSPLDRPEISEPQISDFDGGPVDDSDGAPV 719372..719384 attR N/A CTCGCCAGAGAAG 719567..720187 hypothetical protein; Rpal_0682 N/A MTTIDPDVVQFRRYLRGLEKQIVEVDQRVARVVMHGKVIKDGVRKQGDDWQVRLELGRDVDDKPVESPWVPVQPLSSGSLKIKVKPSEGQRYTLLSPSGVIGTGSQAIRAPFDDDHPAPKGDEDLVLEIGNAKLVIKDGLIGLKVGSNEIELKADSVNHVIEGGDGFLVSKGSKFWHLGVEEKDQKATPKASTEDGPAKWVKAKAG 720193..720474 hypothetical protein; Rpal_0683 N/A METETKSYRITKPRPIGGRMRKPGEIVGLTAREYAAEAGWGGLEEVKAEATAAEKVEQAVTVEPEVEQQITSTDNPDQPETAETAAPTKKRAK 720478..720894 PROPHAGE_Xylell_Temecula1: phage-related baseplate assembly protein; Rpal_0684; phage(gi28198990) 1e-06 MAERTTRTGVDARTGRILRGRAHAEHCVRRILATRLDTRVMRLDLGANLAPLRGENLTAINVMRAYSAMVTAVHSQEPAVRFKQVAPQLVDGRNGAIAFIFSYLFYPYGHLGDYSVVEDADMRVPVTALARGSAAVSA 720891..721829 PROPHAGE_Salmon_Ty2: phage baseplate assembly protein; Rpal_0685; phage(gi29143752) 5e-22 MSTAASLDLSRIGAPTLVNIDYEAALTARLRNFRSLWDAARAKDPTLPLFDVIDADGNPLTQFDANVVLEQEFAFGETEIGQAINDHANALRLATAVSADLDHLAVTYKATSRLVLAPATDTTPEVLESEAELRERAQMSDEARPLFGLTPPGYAWRVRKLFGDRVKDVRPLRRPGGHMDLMILGREGDGSPAETLIGDIQAAFEGEAGSHSTDIVTARPARIVATPVAVKLWVSRGPDPALAVALATTAIAALGSERHRIGETLHAQAIGAVAKSGVVRNVDVLAPLADIQGGEDGAPFISSIAVSWGIDG 721826..723085 PHAGE_Vibrio_vB_VpaM_MAR: tail protein; Rpal_0686; phage(gi428782739) 1e-11 MTADFTPIQPTLNDAERCHSLVNAARWPVLFAEAAKLRTLWDPWACPVDQLPLLAWAWSVDFWKAEWPEHRKRQVIAESRAYHEAKTTVLGYRMALGYVDAEFVRARLPRHAFFAGAAPTQESHDRWLAGLPEIRIYTAVFPIKRRPVRFLQADGTIVQRTLKGRFVGRRFRAHSAKSIVLDGRRPELRRPDGSVQRLVFEGVRIDSFGRLLSDPERLVIPAPLRNTFQVGKRLRGRFVGDGKANGKRVISLSFSTGVDVFRPNAVSPGLTAIDVVPRQMWDVMPPGRGWFISRARKGRGIQRNRADELAYLSIRLADGSRPEYGGRMRNRIGRTRIRRAPFTATVLAHLAGPPKHGFPVGRFVKVGPEARIAEAIKALAVTQAARDTVYLDINSVRPITYGDLARLPENVRAGAIIRI #### region 2 #### complement(2272138..2273175) PHAGE_Entero_phiEco32: Appr-1-p processing enzyme family; Rpal_2099; phage(gi167583592) 1e-19 MAIRLVTGNLLERRVDAIVNTVNTVGVMGKGIALQFKRKWPANAKAYEAACKRGEVVPGKMFVFDNGGLIAPKFIINFPTKRHWRQPSRMADIEAGLVDLIVQIRHLQIRSIALPPLGCGNGGLDWDQVRPKIEAAFRELPDVDVELFAPAEAAGVRQLEPEAQKPRMTPGRAAILKLLSIYREMRYPLSQIEIQKLVYFLASAGQAMGSLTFKKHIYGPYAPELRHVLTKMDGAYLHGVGDGSKPSEITVVGEALREAEAFLNSHQDFETVRRVEQIARLIDGFETPYGMELLATVHWTANETKTTDLNRIVEAVHSWNERKRQIMLPANIKSARDRLVTEQWL complement(2273187..2273858) hypothetical protein; Rpal_2100 N/A MPPPIPTAIFHITAIANLDSIAKQGALLSKNEAAARGLVAANIAYDHIQGRRAVRTVPIAPGGTLHDYVPFYFAPRSPMLFTINQGNVPDCIYRQDDIVHLATTAQTVADTGQQIVFSDIHAALDYARFFSDLGSLTEIDWRIFFEPPRLEGYCKFWQNRQIPIHHLRRLEIRQAEFLVHGELPIAAISEIGVKTAQAAAQVEQAVAGSGWTPTVRVVPGWYF 2274202..2275128 hypothetical protein; Rpal_2101 N/A MSDDPPPRRYLPRGFPPEGLAEARRLYEDTDVPLADVAARFGTNRRCLGKLAESEGWALRWSRPRLTAVPRAFRFSDEMIAYIRQRYEDSDDTVESIAADVRTDRSTIERLAEQQGWLLRKNRPPRDLPETLQMQLEAAATLLQARAAEAGEAVAALPPPAQAVECEAEASVVTDTAVTETVAPEPADPAAPASPEAALSLARRLERAVETQLRKVENLREDTTLGGHRAVEAERIARTLAALTQTLFKVRQLRDPERALSAADDEMPADADGFRLELARRIETFVGGGTDRALPAPGQPAQPGPAAG 2275205..2276365 PHAGE_Strept_6: terminase large subunit; Rpal_2102; phage(gi93007440) 3e-66 MLGGRGAGKTRAGAEWVRAMVAGTPPYATRPHGRIALVGESWHDAREVMVEGESGLLRITPRRERPEWIASRRRLQWPNGAVGEVFSADDPDSLRGPQFEAAWCDELAKWRYAEASFDMLQFGLRLGARPRQLITTTPRPLPLIKRLLADPHTRVTRAPTRANAAHLSPAFLETVVARYAGTRQGRQELDGELIEDRPDALWSRDRIERARVAAAPPLVRIVVAIDPPGSSRPGADACGIVAAGRSAAGDYYVLEDVSSDRLSPAAWATRAIALYRRLEADAIIAEVNMGGEMVRAVLHETDAAIPVREVRASRAKFVRAEPVAALYEQGRVKHVGCFPLLEDEMCDFAPTGLSSGHSPDRLDALVWAITALIGGAHAGGPRMRML 2276463..2276747 hypothetical protein; Rpal_2103 N/A MSRSITIMMAMAMALGSAALGAGLMAGSGAALARGGAANIMDSPGYQRALQESRKRLQQQPGPSMAQPFAAPPVAYPHPERRPGPKRRHRAPRH complement(2276767..2277075) hypothetical protein; Rpal_2104 N/A MLRVVLLLLIALPVVGPARAADLPMHSKIGKIFAEPQPKPRVRQSLEMESGSPVYAPEVDVPPIVHGYYGKPRSYLYRSYYGTDPNLIFGRLPYACGWYGYC complement(2277158..2277925) PHAGE_Emilia_86: putative serine protease; Rpal_2105; phage(gi73852491) 7e-10 MIRTLTFGCLLGAALASPAAAMVGGAPEATGALGRALVTIVGSRGNFCSGTLIAPDLVLSAAHCVGPGADYKVVQYDAQRQPSLRDVARVAAHPQFDMGAILGHRASADVALLKLAAPLPGKAPLPIAAPDDPLAAGQDFTVAGIGVTRRGDGKSGGTARSATLTATGRPGRLQIRLTDPAATDGRAGLGACTGDSGGPALQAQNDRLVVVGVVSWSTGPGNTAGCGGLTGVTPLTLYRDWIARTAQSWGSALSR 2277990..2278550 PHAGE_Rhodob_RcapNL: hypothetical protein; Rpal_2106; phage(gi461474967) 9e-10 MPMLLLAGPAAEPWTVTDLKSFLRVEHDADDAVIASLLTAARAQIEASTCKMLLAQRWRLVLDAWPRDGRIVLRGGPLRSLIAVRTYDERGYSHGLDLDSFVLDLAGGVIASPPWAMPEPGRAVAGIELDLELGYGTAPDDVPPPLRHAVRTLVAQWYDNRGGAAGAALLPGGVAAMIAGYRAVAL 2278547..2278867 PHAGE_Entero_mEp235: hypothetical protein; Rpal_2107; phage(gi428781819) 2e-07 MIDPGRLNRRLTLLAPVETDDGQGGVVRSFAAQAVLWASVVPLAAREGVAADQDRAALRAKITLRAGVALSRAHRLADGDSAYRIIAWRSRERGALLEIDAETEQT 2278864..2279274 PHAGE_Rhodob_RcapNL: gene transfer agent (GTA) orfg8-like protein; Rpal_2108; phage(gi461474971) 2e-12 MTPASVALRAAIHRALTSDTALLAALGGPRIYDEPPREAAFPFVTLGEARISDVSADDAPTQEHQLTLHAWSRQGGHKEAHLITGALLQALDDVPLAPSGHRLVNLRFALADIRREPDGRTYHALVRFRAVTEPIS 2279287..2279694 PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; Rpal_2109; phage(gi461474972) 1e-20 MGAQKGKDLLIKIHDGTSYVTVAGLRSRKIAFNAELVDITHAESADRWRELLAGAGVRRASISGRGLFKDAGSDALVRTAFFSGLISDCQVVVPDFGSITGPFQIASLEFAGEHNGEVTFDLTLESAGALGFVAI 2279704..2280021 gene transfer agent (GTA) like protein; Rpal_2110 N/A MANRHRGEIEAELGGQTRTLVLTLGALAELEAAFAATDLVALAQRFGSGHLSARDLVRIIAAGLRGAGEAVRDDEVAAMTVKGGAAGYASIAAELLAATFGEAAA 2280018..2280221 hypothetical protein; Rpal_2111 N/A MTPFPWAEAMQLGLGVLRLPPDQFWRMTPRELAAAIAGLRGGATAPLDRAALDELMRRYPDQRGPTR 2280218..2280811 PHAGE_Shigel_EP23: phage tail length tape-measure protein 1; Rpal_2112; phage(gi371496286) 1e-14 MTGSGTGEGCDCACVDDTTQKVDQLTTKTQALSSEAKGFARAMTSAFAQSVTGGKQFEDVLKSLALKVSDLALKAALKPLTTSLATGFDSLFSGLFGGSLVKNADGAIKPFAAGGVIGTPTYFPMLGGGVGLAGEAGPEAILPLARGADGRLGVASSGGATTVNIQIATPDADSFRRSETYLTGQIARAVARGQRGL 2280950..2281588 PHAGE_Roseob_1: putative glycoside hydrolase; Rpal_2113; phage(gi331028135) 8e-35 MTPFHEVLFLLDVALKSAGGPERRTEIVGFGSGREQRNARWADSRRRYDAGYGVKTFEALQQVVAFFEERRGPLTGFRWRDRLDCSSAAPGAPVSPLDQGIGIGDGTRASYQLVKTYGAGFAPYVRTITKPVAGSVRVAVGGVEAAAATFACDPATGVVTFAPGHLPPSGAAVTSGFQFDVPVRFDTDYLEVDLSAFAAGAIPKIPLVEIRV 2281834..2283228 hypothetical protein; Rpal_2114 N/A MQRLIFLVLGLLLPMAADANEAVQAIPHRCENCTATPVEVATQAREMSDTCRSVHGTPRSGPDIQQGRFPDGPVFWAIDEVTFACDGAAALFSTNHGAMVHIFVETNDGHATQAFEHAASGVTLERSSDTNKVWLNVGGALCGQNTDGLSTADMRVCQRPLKWDAVTRKIEFAPLSEVRDLPETKNQEAQAGELPAKRIYDSGSELVSKRDYVLNEYWKDKIDLIRWKPRGAPQGTIFNWPFASPDGRSLMVSLLQAPAVCTPKCPARFINAQHRVVLEIMVCADRTKHGFSPDNRTFIACGERFSIPQVDERTALLDNAPPGSNPEAYLEVQRRLRTQPKNRPEPIRVDSALHNDSQMLIREWKDGSVEIAYDVPKQTLPVVQGTLLFRGTRSGSNYQGTAFTFRDGCAPAPYEVRGYRDAKRELVVLTGAAPRRGRGCEIIGDSARSNHARLVFDTRELGDE 2283582..2284493 PHAGE_Roseob_1: gene transfer agent; Rpal_2115; phage(gi331028136) 4e-62 MLTIPTALQARLDAGVTTLAQCWIVRRRDGAVLGFTDHDRDLVIEGVSCRAGTGFSASEASQRFDLSVDGAEISGALDDTLLREADLAAGRFDAAAIESWLVDWSAPELRVLMARGTLGEVRREGSAFTAELRGLADLLSQESGRLYTASCNADLGDARCRVDLGSPARRGEGRVVAAPGTSTITVSGLNGFAPGLFTAGRLSWRSGTNQGAAVEIKQHRIVGGEVRLSLWQATAEPIAAGDSFVVTAGCDKLFATCRDRFGNSDNFRGFPQIPGNDFVVSYPVPGAPGNTGAPIGPVLRGDV 2284533..2284985 PHAGE_Roseob_1: phage cell wall peptidase; Rpal_2116; phage(gi331028137) 2e-28 MNQPIDRDALVAEARSCIGTSYRHQASVKGVGCDCLGLVRGVWRACLGEEPEAPPPYAPDWAEAGGDETLAAAALRHLAPVPCDACDRGDVLLFRWRDGCVAKHAAIASSATTMIHAHDGAAVCEVAITPWWRRRLAYAFTFPGVADPLR #### region 3 #### 3593599..3593637 attL N/A GCTTGACGCGGCGTCCTGCGCGGTGTGGCTCGCACCCAC complement(3600241..3602790) PHAGE_Entero_vB_EcoM_FV3: putative tail fiber protein; Rpal_3342; phage(gi422936358) 9e-09 MAIFTAIFGAVASAIGLTGFFATAFVAVGVLATTVGISYLLRKKPEQAAQAAESHFSAQGQLQASGDVPRSFIVGYSFTAGSLVYANEWGNDGDTPNAYHVQVIALSDLPSGPLREVWVNGEQCTLLSGEAHGEFGVPLAQYRKDGKDHLWVKYYNGRQTAADPYLVNRVSSADYPYEATRVGFGVAYVICTALVEDTLFAGFPTYKFVPGSIPLYDPSKDTTAGGDGPQRWSDRSTWGGDGDDLPVVQAYNILRGISYGGTWFYGAQRMSAARLPITNWLVQIAKCRNGVEGENGIEPAYRSGGQISVDQAPLDIITKLNTTCQGRLTEVGGFYKYHAGAPDSPSFSWTDVDLLSTEEHMSRPFFSLDKSTNGIQARYPDPAQGWSVVTAPAYHRPDLEARDGGRRLMATPLLDFAPYPAQVQRLQKSAIDEARRARTHELAFPPVFWLVEPGDVGQWTSTRNGYSSKLFRVDQMVDHANLDVTMAVTEVDPGDYDWDHETDYQGVAIGPTTFVRPAPQGTLSWLVEPYVERDTSGLERRPCIRLAWDGTLAGISGVAYRVREAESEDIVVSNQTPFYAEGAIIIRGLLPATDYEVEARLIPTAPRDMVPSDWMPVTTPDVRLTMEDLVAGIQHVIATLKQEREEITAIRADLSNMIATVAARGVVDKYLLHQETADSRASVEVVSQALATLDEAFASYQTEVTAELGTVSASVTTNSSAIARLDGYAAARWSVTTNVNGAISGIELINGGQSLSQIIFQADKFKFQLPGYANGAPQDFLVVGQVGGVPTWGLAGNMVLDGTFTARMFNVAQLSAITADLGHVTSGYQQSPDGKMIADWNNGRMEWWD complement(3602792..3603265) PHAGE_Celeri_P12053L: GCN5-related N-acetyltransferase; Rpal_3343; phage(gi399528882) 9e-12 MSIVRLAIDTDKDQAVALLHASHLGAGFDRADGPTGFVVPFEPAYAERLFLMHVRSPRMICLAADDRDGVTRGVLLAAAYEHRFGPVWIASETAWWIDPAHRGGSAAPRMLDAYEDWARRQGCVFAGMAGMGGDPQVAKLYLRRGYQTAETHFLKAL complement(3603265..3603915) hypothetical protein; Rpal_3344 N/A MTRSLSEQAYNALRAHSLVSRDFLWLQVRTIADGSPVYDGMWSDIGPFDAQVIDPDTGGIVTRTYIGSSTLVKISDIALVSDLTVQTVTIELAQCSGRVNDLLRSYDAKQGVVQIHRGLFDEVSREQAGPAIPRFYGFIDLVEIPTVKENEFGTVKLTCTSHTQELTRSSSDTRSDASQRLREATDNFYQDVATVGDRQHFWGRANGTVGGGSGGK complement(3603912..3604535) hypothetical protein; Rpal_3345 N/A MISFPRVDLLANVGFTGDPLVLVSRQEMSRTADGISIGKDLGSAIWLASFVTEPLRNALALELEADLDTLDGVINPFEAYDLRRPGPRAYPDGSANDGVLSAVNANNKAIALTGLKAGQIISKGDYLSFDFGGRRALHRVSERVVANSAGVTAQFEVRPHLRPGWTLGIAVNLRAPRGVFNLAPGSVKPKTYNGTQTVISFQAVQIP complement(3604532..3606580) PHAGE_Xantho_CP1: putative tail length tape measure protein; Rpal_3346; phage(gi431811013) 1e-08 MRVSLVIDGDSNGAVEAATDASKAVTDLGTTATDTAKGLEDGFKKASGAAGSMKGSAEAAGAANDNLLASTSALLSKFGELASKAKGSNDALALNASTASSLTASLGALSRSVGVVGFLTGAIGLATAALSAYNELSARASREIDRQLTEQARLINVVRGAYQNAKTAAGDFYEQSKDVTLLQLRQNQVDLQRTLQTQVGSFIGGVTSFGDSLGNYFNNVKTIRGELLPFEDAIFRLNDGFKQGKPDVEGFVNEIARIALLDPSLQKAASDLITKINEASKTARALKDLSSGEKVIEGKDKPEDRKRVGITDQVSDTAGQFERLAKSMDRQAASAEAEASATGKSAGEIAKLRVEAVLTEAAQQAGGGTAEKYAERIKQIGDRAGEAAQKLALARVQSDAAFQRQTLGLSADDAQIAEQLRGAYGDNVQRALSSADAAALKFNQDMLQLKNTTLDVSKGVFTDFRTSIQQGATAMEALGNAGVNAIGRIADKIASTQLDNLVSGLFGAFTGGSGGGLLSSLFGGGSKGSFATDGIGGFGPTFTAADGGTFGPGWGVVGERGAEIIKVHAGGVTVFPHHVSKPYLPGFADGGSLDQLGNIARLPSFQSSSSGGSAGSAAPQEFRLSVSVDDDGKLKTVVTDVAKGIAQEVSAGTVKDFVRSPQFTDHVARAYGDAKAAWKIRS complement(3606583..3606924) PHAGE_Rhodob_RC1: hypothetical protein; Rpal_3347; phage(gi472339676) 6e-09 MDAESIAELTEALAAPALIEPADYAGVWPEHADTVRAFLAVASQWRTTAIGGGGFATMGGGAAAPLRLVYVSLDYTAVRAGLDAEQIAITPALWRGLRIMEAAACAALNESNS complement(3607017..3607346) PHAGE_Rhodob_RC1: hypothetical protein; Rpal_3348; phage(gi472339677) 3e-14 MFKIVPNPTFTHDVTVLTPVDGGHDEETLVVTYNYLDTEEVKKFDLNTSNGTTQFLDSLVAKIDGLTGPTGEPIACSFDLRQKLLKMSNVRLAVIRHYFDAVRKVKEGN complement(3607359..3608300) PHAGE_Rhodob_RC1: hypothetical protein; Rpal_3349; phage(gi472339678) 2e-68 MFDSVFFRKMVLLAKLESDYATDPTLTGAANAILGTDIALRPMEGQDVARNLIRDYLSGEATIPAGLHVIIEFSTELAGSGTPGTAPAWGPLMRGCGCAEVIVANTSVAYTPISEDMESLYVKFWLGDTLHALKGARGDATISLDAQGIPRIRWTFTGLWVAPTEVSRPATTLTGFKKPKIAAAANTPTFELNSVALALRSWSLKLGNKVEPRLLVNVEKIIITDRAEALDCTVEVTPLTDFDPFALAAAQTLIPAEIVHGTVAGNIATIAAPTCQLKRPGAATNNQGIAERVLSLTPLPSGTGNDQFSLTLT complement(3608303..3608473) hypothetical protein; Rpal_3350 N/A MKHPHKGGSYRREPDGSLTRLADELIKGADEFAVANTPDDKQPADTKPARKAKTEK complement(3608470..3608916) PHAGE_Rhodob_RC1: hypothetical protein; Rpal_3351; phage(gi472339679) 2e-18 MSLIVDVKERLETEVPALTGKLDYVAELAALTDAGAPPQREVSAFVIPLGEDDQGGGGSMAAGLHTQMIGETVGVILCVKALGDAKARKALPTIDDLSNAVTAALAGWGPEDASGVLMFRRGRLVSVTKGLVVYQLEYTLLDQLRIAR complement(3608913..3609473) PHAGE_Rhodob_RcapMu: virion morphogenesis protein; Rpal_3352; phage(gi356870876) 3e-22 MTGALIRISLKDADNALAPLAGYIARANDKLGLFENIGASVTTSTQHRFETSKAPDGSPWPPSLRVKKHGGFTLRLTARLMRSITYQASSDNVEIGTNVVYAAIHQFGGPINKAARTAVLHFKTNSKTGQSRFAKPNKADRARKAEIGAHTITMPVRAFLGLDDDDEREILSIAEQWLAGENGAAA complement(3609473..3609901) PHAGE_Rhodob_RC1: hypothetical protein; Rpal_3353; phage(gi472339680) 1e-33 MTYASQADLVDRFGSAMLVDLTDRAEVATGAIDAGVIARALADTDAAIDGYLKGRYALPLSTTPPLLRDIAIAIAIYKLHRDAVGEKIRQDYVDAEKKLLLIAGGSIRLDVAGAEPEASGTNGVRVTDRERPLTAESLKGYI complement(3609906..3610232) hypothetical protein; Rpal_3354 N/A MANQTPFKIDDDSYREGQEAFKRGATLRSIVEQLATFGIDELEDRKTFSGVLGFGDALLDHLRNPAVVVASGEPVRYSDGFVSSIRTTAFPQTTPARASCGTPPKPTR complement(3610347..3610423) tRNA N/A GGCGGGATAGCGCAGCCCGGTAGCGCGGCGGGCTCATAACCCGCAGGTCGGTGGTTCAAATCCACCTCCCGCAACCA complement(3610414..3610875) hypothetical protein; Rpal_3355 N/A MASKPKPKPKPEKPAEVADNSTPRTADQDHDQPAADAAAAADQAAAPAAGSVAEPAATTVTKANESFFVTTAVADQVAGVVVTQKIPTVDLVGELTKVVIVKSKSDRGRRRAGFAFTREETRIPLADLSDDQLVALVADTELIVETVDEVTAG complement(3610887..3611777) PHAGE_Rhodob_RC1: major head subunit; Rpal_3356; phage(gi472339682) 2e-122 MIVNSANLNNLRVGFKTSFQGGLGLAPSQYLRVTTVVPAATKEQKYGWLGKMPGVREWIGPRVVQNLSEHDYSIKEKPLELTIGVDRDDIETDNLGIYSTLFTQMGESTGSAWEEMAWAQLKAGFSKPCYDGQSFFDTDHPVLDESGVAQSVANTDGGSGAPWFLLCTKRTLKPIILQKRKDFEFVAKDKLDDDTVFNNRQFTYGADARGNTGFGFWQFAWGSKQTLDPTHYEAARVALTGMKGDYGKPLGIVPDLLVVGSSNEGAGRAILQSQLINGGESNKWAGTAELLVVPWL complement(3611830..3612606) PHAGE_Rhodob_RC1: hypothetical protein; Rpal_3357; phage(gi472339683) 3e-36 MTALTADRNTPRLEGEMKQGPVAAAVKIFAGAMVMRDAAGNITKGQTALGLRGCGRAEEQVDNSTGSAGDKTINYRGGAYRFANSASADEITRADVGKFCYAVDDQTVAKTSGSGTRSIAGIVAHVSSLGVVVCFDEDDLATFLATRRVAVPLRVATLVGTNVYRTLSTFAGRIVKIWSITEGVLTTGDATLTAKINGTAVTGGVITITQSGSAAGDKDSATPTAANVTAVGDELSLTVGGTNATATAANAIFEIELD complement(3612762..3613868) PHAGE_Rhodob_RC1: I protein; Rpal_3358; phage(gi472339684) 2e-80 MSGHQSKPVLNVARGVGQPIALNADGSAPEWIMLIPAGDGGVIHTVDGRGPYRVADPAALAAQSLAAVGGRAPLDENHATDLAAPNGEPSPARGWIVGAEARDGAIWGRIDWNASGAALMADRAYRFISPVFTHDKAGNVLTLLRASLTNVPNLRGMAALHQQENAMDLLAQLRALLGLDDTADEAAVIAKIKDLKGGGDATAMNAAVSKALNAALSPIAAVVGLAADADAQAIAQAVSKAAAPEGNPIVKSLQSELATVTTKLNDLLGSAAKEKATAFVDGAIRDLRVGVKPLREHYIARHMADPAAVEKEINSFPKLGESGQTLLPTDPPKDGQVSLNAEQLTAAKVLGIKPEDYAKTLAAERAAS complement(3614253..3614708) hypothetical protein; Rpal_3359 N/A MRRTKFVIAFVVAMTASTASSAFSVFQSSTSGKMIAACEASLKRRLLDPSSYRRIEAAAEVNEISLDEYFKRSNHAPATQELMRRVGNKASRVTAILDYNARTAAGLTTRNVVKCTYETTGEIGEISEHAVEIDGKSFTSWLVDRASRSSR complement(3614723..3615367) phage repressor; Rpal_3360 N/A MKALIRAILDARDWTQADLAARLRTTQVTVSRWLDGTEPRGPMRDRLRDLAEESGLVPQARANHVIKIMGRVGAGAIIDPDYEQTPEDGLEQIELPYPIGSDLIGFEVSGTSMMPKYDPGEILVVQREQPVSFDSMIGQYAVVRTDDGRRLVKRVMPGPKSNLYNLESANAETIVGARLVWGSPVQMAIPNVQLRRIAMKSSRSSKAARSKKSS 3615468..3615728 hypothetical protein; Rpal_3361 N/A MIKVRDIRTKVFKVTQAEMAGIAGVQQPTISRWESSTSRVPAVALAKIREEAKARGLRWDDRWAFGGAVQTGAKQRQPRKKNRVRP 3615725..3615997 hypothetical protein; Rpal_3362 N/A MTNAAQPAPEKFAVARMIGGRPRFFLGFAEQTAAHGFARVLITPEPDKAREYDSRVIAELMVDFLDFLDSAGAGERRRNWIVMPLPEEWL 3615994..3616449 PHAGE_Rhodob_RcapMu: conserved transposable prophage protein; Rpal_3363; phage(gi356870852) 4e-10 MSRRRASDTASSDIYQPRPVVERFSAERVRASSCAARIKQALKETLRECGRSREQIAAEISAYLGETVSPQILDQYTSGANEKSNIPAHRLVAVFAVTGDIRLLNALLEDTAAIAVPSRYEALLHIEQMRELRDRLNQEIESADAEWRAAQ 3616446..3616775 hypothetical protein; Rpal_3364 N/A MNAPSVIGWRLQPLQGVTAKIIVADDGRNIGVLYASEINPQSAKDGALVAAAPKLQAALAELTTALDEALSAIDVAGSMWAERINIARAAADAALAESAFDRAAKAGPV 3616795..3618951 PHAGE_Rhodob_RC1: integrase; Rpal_3365; phage(gi472339716) 6e-123 MKDYLSAAEIAALALPGLPASKRGVAFAAERAGWEKRQRSGKGGGLEYAVTSLPPQARIAYLGHHTSEIELPASLAREAATEPGAEQLGAPAAEARDARLALLALADSIASQAEIGRKRADVYFCDCYNAGQIEVAGWIKSEIKHLAPRTLARWRSFAKAGQKTKLAVDRARARRGTGVLDRANGGEVKAFILALLIRQPKLSADDIAKNVADYFGTLQIGDRRIPVPPVRTFQNTLKAWKLRHGVELKAICDPDGFRSTTRMAARVAMPAHRLNEVWQIDASPADVLLLDGRHTIYVGIDVYSRRLIATVSKTPRAAAVGLLIRKAIISWGVPERIKTDNGSDFVARTTQRLFAALGIEHELAPPFQPEKKGHVERAIGTLQHGLMRSLDGFIGHSVADRKVIENRRGFAKRLGQKEEDVFEVALTAADLQHRLDAWCNDVYANKPHAGLKGRTPFEVAAMSSTTIRRIDDLRALDMLLAPVAGKDGLRVVTKTGLRIHDTHYNAGFLGLHVHRTVLVRMDEADMGRAYVFEQDGETYLGEAIAPELLGIDPAAAARAVRAEQKRLVDESMAAANKLRRAVKAIDLAGAIHRQALKDAGTLVEFPKPVTSHDTPALAAARNVAAGETSAHSDAVAAMAERMRAEDAANSAASNVQPLHSQEPKWLRWNRAREIEARMRADEFVEPDDLLWLGSYRQGTEYRGFLLTFGTEEEAAASV 3618984..3619421 hypothetical protein; Rpal_3366 N/A MSITNEHSQQKDLDAWILDSAEIRLADGCHAVCILVDQRTGRTLTTVNDPDAVEDDFETLVLIASADWSETSASPYPPIVMDNSRVHARLSALGLALQMTSPHQGARRSLAERRLNALLLGVDVSITTSDELREILRRRGSEIAV 3619450..3620244 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_3367; phage(gi472339715) 2e-33 MSKDTTIHRGPIALSNVASFMVLTLRLVERAPNRPGFGVYSGFPGLGKSCSSIVAQNKTRAVRVEVGDSWTRRTLLTKIITEFGEKPPSKRASIADLAQQAIRLMGEDPRRPLFVDEADKLVDKGIIEILRELQETSTAPVILIGEENLPTKLAAFDRIYDRVLVWEQAQHCTASDVRELARAYWPKLKFSDELLETIRVKSAGRVRRILNNFDEAAHIASNRNLTSLGVEDWGTAEYHTGRPSKKVRDASKFDSQVAIPTRTA 3620241..3620621 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_3368; phage(gi472339714) 7e-08 MMPIRDRQAVRLRIRVPETAPTRCAEQHLWTAMRTLHQFTLEDIVYHATTDEVIIDKAQAARYLCRLREAGILHRRRDPVAGGETWLLKPAANSGPKPPRIVRVSLVWDDNSRIPVGDPQITEERV 3620618..3621013 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_3369; phage(gi472339713) 3e-20 MSASGNDYLAKARAAWGNELPDWIEELAKEANRITARSIAKRLGYSNATISYVISRSYKGNLKRVEETVRGALMGVTVDCPIVGEIGRDRCLEEQKMGNTGASPNRARLYHSCRSGRCPHSRLNQESDHAE 3621003..3621290 hypothetical protein; Rpal_3370 N/A MLSNDLRDLYRQFNSWISGDGEAFTVDAARDFERRLKHGAAKAALLELGVDPRVFDTDVPFEKIVPIEASAPSAQLLTFPVDRVVRLPQIGGDAR 3621287..3621640 hypothetical protein; Rpal_3371 N/A MTASASHLDRPSFADQVAAVEAIEVAQRVIALGTRRAALGVSTVETVAMAHRLIALETLAALTFDMLAQCQSAADVDPAQRDQLRLVTIQHIGDVGAQLEALGYVTGPSTTEASTEN 3621642..3622190 PHAGE_Rhodob_RcapMu: host-nuclease inhibitor Gam; Rpal_3372; phage(gi356870857) 1e-21 MALKTKSVACPVPQSRDEAGKAVAEFAAIDRQLAEIEIEMNKFIAEVKETFFARAAPLRLKADAIAGAVQAYCEANRSDLTNSGKKKTVDFGVGKVSWRNQPSKVTFSGKEDDLIDFIRRSNDVELSDMLRATFEVNRVFALSRPDLVAKVPGIEITEGGESFEIKPDKTALPDSSVAEAAE 3622187..3622582 PHAGE_Entero_mEp390: hypothetical protein; Rpal_3373; phage(gi428782707) 8e-06 MTAAQYGLTPRQRDCLDAIVNHQTAHGSAPSYEELCAALALKSRGGVMRYLDALEERGYIQRRPNTKRSISVIAGRDVRPRPQYELPAEVDANLRRFCAANGETDPAAVIADAVTLYIDQAEHDRRVEAAR 3622579..3623076 Chromosomal replication initiator DnaA domain; Rpal_3374 N/A MTTSLDQACRLARTVRKTPPAAPAVRIAITGGDDAALPVEIVRCASAVVRITADFRRIERPLTVRGVTAIRAIQLACASYFDVAPIEMRSARRSVKVARARQVAMYLAKTMTPFSCPQIGRQFGGRDHTTVLHAVRRVTALMQQDAAFAADVGTISRWFAQGALA 3623073..3623774 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_3375; phage(gi472339703) 3e-24 MKLSTKPATTSMIATIHTLKGRLKMEDDTYRDLLEQQAQKRSAKDLSVTEAGRVIDRLRELAGDGGIKGAVAGLDSAIGGKLRALWIAGYDLGIVRDRTDRAMLSYLERQTGVSHVRFLADAGVANKAIEGLKRWMARDAKVEWPTDSSDVRGAKRAILAAQWLRLIELRDVIPSIAHHPLRDLDLYAWRLVGMNGWNFFDLCHFDQVQNALGRKLRAALAKHGQHATTNQET 3623776..3624174 hypothetical protein; Rpal_3376 N/A MAFEEIEFVKTSKINPDGLPVSVSLTKRASAKIPSLHIGLTQAFLAQIPFDTADRFKLLVGNGDDAGVIRLVRVEGGPLQITASAGLGARIHCGKTDRFGSEAQDKVFCAAEVIDGNAIEIVLPDWAIAAED 3624178..3624759 PHAGE_Caulob_phiCbK: putative GcrA-like cell cycle regulator; Rpal_3377; phage(gi414087935) 2e-10 MTAASANQKPTMPTDAELARARAERGWTDHRVQVLHRLWLCGIAGGAIASQLGGGVTRNAVMSKINSTLGPGARAAGVVETQRAAKTATPRRPRNEAVIRTRGPAQSKNAEQRAAARAAAPSIDDEQIPTNQRAQLMDLDASRCHWPIGDPLKPDFFYCGGKAWSGLPYCAGHARVAYQPAGDRRREAPRGRR 3624746..3624925 hypothetical protein; Rpal_3378 N/A MAGADEQMKKLLKELKPLTAYERHLRIVALAEQYGSGFAWAVKKEFEKLNQRKSDGASR 3624922..3625134 PHAGE_Pseudo_vB_PaeS_PMG1: hypothetical protein; Rpal_3379; phage(gi374531689) 2e-13 MSMDYIRGYYKVPAKRGGRVEYFGGKALRRGTITGARGHRILIRLDGDDFPTVFHPTWKIRYLSVEEAKA 3625131..3625370 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_3380; phage(gi472339701) 2e-05 MTSGAAPLLKVSDHALLRVLQRVGGFEIEALRASIAADLLRAAAATEQVGVRDFVVLRDGFPYVVADGVLVTVTEAPRR 3625367..3625762 PHAGE_Burkho_KS10: hypothetical protein KS10_gp27; Rpal_3381; phage(gi198449289) 4e-07 MTRELPGVLAEIAEVAGETAALKISALHGGQRVYFPSRPQGDDHWLVAAVGAEAAAKLAARFGGSTIDIPLHVGGTYRRFVRQIAERIHALDGDDLSSREIAGKLGLTQRTVHRHRSRHRGKPDNGQGSLF 3625869..3626783 PHAGE_Agroba_7_7_1: hypothetical protein; Rpal_3382; phage(gi435844350) 7e-50 MESRFNKCLAVELRYEGGYTNHPRDPGGVTLEGVIQRVYDGYRKRKGKPRRRLTASMRGTPEWITERDEIYRLQYWNQIRGDELPAGVDLFLFDSAVNSGPYQAVKWLQRSLKLNLVDGHLGEGTMAALMAHPDHDALIADMAARRLGMLQHLSTWDAFGGGWSARVASCKKIAQSWAMGSVGPAPEPVHLMSGDAKAYASDVAQPALDAGDAVKGGLGSGTVAVAIDSAKGSLAPLVGTSDLINHLFTALTLLSVVIAIGALAYSLWSSRKSKIAQRAIDGDIVGDVPTPAGVPGMPWSQVSA 3626780..3627328 hypothetical protein; Rpal_3383 N/A MITRFAHDVGELFGDVTAELFWSAATSVPSLLLLGAVAVAALTIAYLPIVARLWPAVEVYQRISGIVAVVAAAVLMFLVGFAYADQRAEVERLKDALTFKEFQLKSAADTAADAEQLRRAAEAETRKAKGQLDDYCKKFGCGDDRKPPAPEMGVRVVRRCDPPPGYVEWLRQLQRRPAAGQR 3627276..3627518 hypothetical protein; Rpal_3384 N/A MSSGCASSSGGPPPASANGVYVPRDCESLARNVDDPVVGPRSDPWRVIGEYAVALGELNGNIDATRQCQAGQRERLGQGK 3627521..3627901 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_3385; phage(gi472339696) 6e-07 MTINVSDLAPWVAIAISAAALWYAIYSGRSKVTEEKFKELSSWIETKASKDHVAVLAAKLDVVEDKVTVIDNELKHLPDNQTVQKLEGMIGTLSRDVSVLSERIRPVAAIADRLQEKIMESVEIAR 3627898..3628194 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_3386; phage(gi472339695) 1e-18 MSRDIIREEARLIMLRELHGQTNYALNDALLRDVLESFGIAKTREWVREEIGYLENVGAVTRTSAGSVVVAKLTPKGVEHVERRLVIEGVKRPSPAEA 3628199..3628819 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_3387; phage(gi472339694) 1e-34 MKAARHKRGRLSEIDKLPEWADEAKLWAFEQLKERKLTQLEILDGFNGRLKVAAFEQGITDPPVISRSAFNRTAIRIAILSRRLEETREIAAVIAPKLDEAGDNSLTLMVAETLKTLISEMLGNAGELTADGATAEMLMMTARALAAAEQAKRISADGRRKIEAELNAKASKAVDQVAKAKGLTTETVDAIKAKILGIDTSKGAKP 3628816..3629028 hypothetical protein; Rpal_3388 N/A MKLWILVVYLAGSSGTVNNGGPATAEFVTREACEAAGAAIAEKWPGGTLWKPKYNGHLCVHASSPTAAAQ 3629051..3629548 PHAGE_Mycoba_Che9c: gp69; Rpal_3389; phage(gi29566175) 7e-08 MNDLPELAISVRQPWAWAIIHAGKDVENRSHGMVRHLSPVVGPRAIHAAKGMTRDEYELAASFMRSIGVACPPPADLLRGGIIGAVEVTKRISKRDPCESASRWFFGPAGLVLTNPKPCEFVPSVGALGYFKWKPADASIVPPPARWMLPEAKPAEPPPNLFGAA 3629545..3629889 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p80; Rpal_3390; phage(gi18071287) 2e-07 MTAARTGRTPCINPRCRRTFDAAKYGSGEMICGKCFRSLPQPIRDNHRRLWRHLQKWRRAEARTTDEFKRSRVASIVDAYSSQINLHWDQVLRPAIVTPERPVGLDGFLAEVGL 3629886..3631520 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_3391; phage(gi472339692) 2e-130 MTDPRAISEADWAEARRAGMASAARIFADRGSIEDVLIGYQKRLLASTALHQVTLCEKSRRIGATWAVAADAVLTSAATKAAGGMDTFYIGYNLDMAREFIDTCAMWARSFNEAAPVVNEFMFDDGNPDRAIKAFRIAFASGFEIVALASRPRSLRGRQGYVIIDEAAFHDDLAGVMKAAIALLMWGGKVLVISTHLGAENAFAKLIDDARGGRNPYHVERFTFDDALNDGLYQRICLVTGKEWTPEGEAKWRAGIIASYGEDADEELFCVPSKGGGVYFPRPLIEARMLPDLPVVRLERNSAFTFLPKEQREADIEAWCEEHLKPLLDALDPERQHGFGQDFARTLDLSVIAPIAIGKTLKRTVPFSVEMRNIPFEQQRQVLFYVCDRLPRFVGGKMDASGNGAYLAEVAAQRYGQLRVEQVKLTAEWYLDNFQPLKTAFEDGMIAIPQHADLIDDLGIVRKERGIPRIPDIRTKAADGSGKRHGDFAIALVLAYAQTRSKLVEFGYRGAGDSAASGDGPPDDQDDARDWWRQPLGAGLRGGL 3631517..3631744 hypothetical protein; Rpal_3392 N/A MKKPVRKTVKSAPAKRTKLDKAAVDICQTVYGRSGSCVCAGSKKPVCTNMLAAARKAARVFVGDEIIDAVIKEPA 3631744..3633375 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_3393; phage(gi472339690) 3e-153 MADAPIIYGPDGQPIRREVLTASVAGPTVTGVRSPFGAYPADGLNPRRLASILREADQGDPISYFELAEQIEERDPHYLGVLSTRKRSVSQLDITVESADDTPEGKSIADMVEAWLRRDELQFELFDILDAIGKGWSQTEIIWDTSEGQWQPKRLEWRDPRWFRPDQRDGVTPLLRIDAGDAFAQGLPPAGPNGGGYAPLPPFKFISAVIRAKSGLPVRSGLARLACWSWMFKAFTQRDWAVFTQTFGQPVRVGKYPAGSSEKDKDTLFRAVANIAGDCAAIIPESMLIEFIESANVGSSHQLYKERADWLDQQMSKAVLGQTATTDAIAGGHAVGQEHRQVQEDIETADAKALAAIINRDLVQSWVQLEHGPQKVYPRLRIGRPESKNVTQILDGISRGVPMGMAVEKSYMNDLLGIPVPSPGADGRMPELLTPSASASPFGSMFPSASPQQRALAAAEMIMHDVRDPIAVLSDQAARLCAPGSDALVDEVRGVIETSTSLQQVQEKLRALKPGAAEAQMAGLMRMARVIANLTGRASIPDA 3633368..3634132 PHAGE_Rhodob_RC1: hypothetical protein; Rpal_3394; phage(gi472339689) 3e-36 MLKGFGTATACSCCGGVTTALQAKVVPFSVAPKEAIDFLRRKVDVPTATWTDLWQAEHSVAFTVAGAQTDALVKDFHEAVQRAIDDGLTIEDFRKDFDRIVENHGSDYNGSRGWRSRVIFDTNVSTAYAAGRWEQIQRVKRTRPYLRYVHLEGQAHPRPQHAAWHGLVLPVDDPWWDTHYPPNGWFCHCTVMSVSDSDLSRYGWSVADQAPQTIMVQRQVRQSDGSIRTIDVPDGVDPGFAYRPGEMPDAFGED 3634551..3634589 attR N/A GCTTGACGCGGCGTCCTGCGCGGTGTGGCTCGCACCCAC #### region 4 #### 4268318..4269514 PHAGE_Entero_mEp235: portal protein; Rpal_3975; phage(gi428781813) 3e-37 MTIASRVQSWFGLEKKAGIAAPEPWLFELFGAQASGSSIRVTPRIAMECAPVACAVNAISQAVGLLPVHILKRGTDGAKDRAPEHPAYRLLHHEANEWTPAGKLRQEVTRDALLYKHGGFAEIIRVGDGRPFELIRIDPEVSPITVTMTSDGPAYAVQEDGITRQIDRANILHIPSPSLSGLGLAHDARKVIGLSLLMERHAERLFANGARPSGLLSLKGNISTDTLKNARAAWNAQHSAANSGGTAVLPADVVWQSLTLNSADAQFLELRKYQIEETSRIFRVPPHLLYEMGRATWGNSEQVGQEFLDFSLMHWVSAWEGEIRLKLFDREERDKYIAEFFTDGFARADLAARMDAYSKAIAARILSPNEARAAENRPPYSGGDRFENPNTTASGAAA 4269511..4270215 PHAGE_Salmon_1: putative bacteriophage tail assembly protein I; Lambda gpI homolog; Rpal_3976; phage(gi169257201) 8e-16 MMRTIHLHGRLKTLFGPKHRFDVLTAAEALRALNCAFPGEFVKELSEGAYCVVRGNRHSGMQLDIELVTSFKLGNADLHIIPVAAGAANGTNKAVGKTILGTVLIGAAVFMSGGAAGGLLAGMGAQALTGVGITWGNIALVGLGLALSGGATLLANASDPTTSDTKTDESFTTAGPTNLAQQGAAIPLIYGETMTGSNVISFDADIEDIRAYQDAQGSMADYYLGAFQYRVGNS 4270215..4270541 PHAGE_Rhizob_3: p015; Rpal_3977; phage(gi195546546) 9e-06 MSSPQNHRAFFGDGEHDFRLTAPLILELERKTGCGIAVLFQRLFHRSFSLTDLHEIIRCALIGGGTDPRRADQLIATYAVDRPISETLPIAIAIAELHWFGLPNEETK 4270227..4270238 attL N/A CAAAATCATCGC 4270538..4270735 hypothetical protein; Rpal_3978 N/A MSKRSVLPPDWHTGDKVRLRSGGPWMTLGKASESHLGITVEVVWFDDGNQLRKESFFPVMLVRQT 4270735..4271232 PHAGE_Azospi_Cd: phage head maturation protease; Rpal_3979; phage(gi168495135) 2e-16 MDKVEIKATLAVDDAGVITGIAWPFGSPDSVGDIITKGAFNVAVSDLPMLFQHDPADLVGTWEEVRETDEGLAVKGKLHLAESARARAVRGLVQGKLIEGLSIGFRTKASARQGSNRVISALDLFEISLVRNPSHPKARVTSAKQFNSAEAIAAAINSAAAQIRK 4271235..4272383 PHAGE_Azospi_Cd: Phage major capsid protein; Rpal_3980; phage(gi168495136) 1e-54 MKPHYELELKEADTDPAELVTKALADFKDAVDGRLTAIETKAANDNKLADRLDRIEAKMNRPGIGAANDNDDLERKAFISFARRGVERMGADEQKALTVSTDASGGYLAPEQFGNELIKLLRQYSPVRQYANVVSIGAAEIKYPRRTGSTVASWVDETEDRSESEPSFEQITIAPFELATHSDVSTQLLEDNAYNLEGELAADFAETFGIKEAAAFVKGSGVKQPTGIMTAAGITEVKTGAAATFPTSNPADVLIGMYHALPGVHAQNGVWMMNRTTLGTIRQWKDGNGRYLVLDPISAGAPVTLLGRPIVEAIDMDDIGANKYPVLFGDLKGYRIVDRVGLSVLRDPYSLATKGQVRFHARTRVGAGLTHPDRFIKLKVAA 4272389..4272958 hypothetical protein; Rpal_3981 N/A MRLANDTIAVKLGPVALTLRATLRAAFTLERRYEGFGTLSQAIALGEYGAFADLIEATCEDPLAGEALIQQLAAHNLIENIIELRDPLLRLVTMLAGADEENTNTAGPKITFEEYFTQLYRIGTGWLSWTPDQTWNASPAEIIEAYKGRREMLAAIFGKSDNGKSHDLTKMDKDERKRLWERLRAKQCQ 4272949..4273296 PHAGE_Bacill_phi105: hypothetical protein phi105_50; Rpal_3982; phage(gi22855043) 9e-14 MPMKPPRICSCGLKVASGVMCRCQIERKAQADKRRPTARQRGYDSKWQHESKAFLARPENRFCACGCGRIADVVDHIKPHRGDMKLFWDRNNWQPMASSPCHSSRKQSLERKGTE 4273298..4273720 PHAGE_Staphy_Twort: ORF076; Rpal_3983; phage(gi66391329) 3e-05 MGAYILLTYKGVTKSIAEWSKITGISDACIRKRLHEGWPVDRVLTQPKWKRVKGKSEQMPITLCSKQLEEWQRDIHRQHRELSRNIRAFVTSVENQMSDLRYNFDRLVAASIAGEQRPGVGPNSHQSRRDRSLPTAQEST 4273735..4274016 PHAGE_Entero_mEp235: head-tail connector II; Rpal_3984; phage(gi428781817) 4e-06 MVTLDDLKAHLNLTLGDDDELLTSKLAAAKQWITGYTASDVDAAGTPAPVDEAVRQLAAHLYENREATLVGITAQQTPFGFLDLLAPYRAWSF 4274018..4274434 hypothetical protein; Rpal_3985 N/A MANSDPSLALQAVIRERLIASYELMALVPPDNVLDVTGRPEVMPAVIIGEGQSVFDRFKATTFATLHVWFQEPGLVAAKEAAGAIIDALDVDAQRDGVLRLPGFVVHGMGATRTQFTRDPHGPYSHAIVTVEAIVSPT 4274434..4274754 phage head-tail adaptor; Rpal_3986 N/A MRAGSLDSVIEIRRPVTQVNGYGTPSVTEWVLVAKMRAAVLDYALDDREGQRGNVSETAITFRTRYLADVSLDHRVEYDGNSYTIKQVRALGRARGLDLRCERVGY 4274733..4275137 hypothetical protein; Rpal_3987 N/A MRKGRLLTILTALLSEDLCVLSQRHEYFGRSASDSSLTSWPELSTRHAWITSDFLNEPGRIHSSSKSMPLHKNGQGLSSKLLRGKIIERCAQIFVLPCRFINPFEGIAHLQSPAIRSIRNSYARSLWVVEEQIA 4275134..4275511 PHAGE_Geobac_E2: putative terminase small subunit; Rpal_3988; phage(gi148747728) 3e-06 MKGRKPELTGDANAMSDITPPPSWLSKYAKAEWRAVLPVLIERRILTPADLGSLTSYCVATGRVRELEIRNRAEFDLKLVRAQDAAMKTARQLAAELGLTPVSRNRPAVRDNDTAEDDDNPLNVS 4275486..4277108 PHAGE_Entero_mEp235: terminase large subunit; Rpal_3989; phage(gi428781812) 5e-48 MTTRSTYPDWLFDGSPIDDPLGYGERAVNFLRLLKHPKSAAPKRALMLDEWQDRIVRRIYGPRDQNGHRIVKTVVLLLPRGNRKTSLAAALSLLHTIGPERRPGGEAIFAAGDRPQASLGFKEAAGIIREDKRLVKATRIYDAHNSVKKIVFNKDGSFLEAISGEGAPAHGRTPAFAFVDELHIWKNADLWTAIKSGLPKTQGSLLIIATTAGRGQDNIAHEIVDRARKVARGDIDDPSLLPILFETPDDADWRDEALWHRANPGLALGYQDIEGLRQLAREGETSITARETFRQYNLNVWLDRSTDPFVEMAVYDQGADPVDLEALKGRPCWLGVDLSSQTDLTVIVAAWRDDDGGFTVLPIFFCPKMNLREREEQTGAPYLEWERQGLITATDGNVVDFDAVEAAIRDLCDRFEVTEIAFDPALARSVLNSLQKDGYPAVEMRQGALTMMPAIAELERAIVAGKFRHGGNPVLRFNFANVEVERNKQQHAVRFVKSKRWLSIDGAVAAAMAVSRAAAGESGRSLYDDPALKPEDFVWS 4277108..4277503 phage protein, HK97 gp10 family; Rpal_3990 N/A MADDLTRYLNSLPDKVRQQVSDAVRTEAERLSAAQRAALKAQEQAPDETGDLEASCTTTPGRDEFEVIVQAGGDATTKEVREGSGEPYDYAEAFEYGTSRQPARPFFFNTYDAMRAEIETNIGNAISEALK 4277500..4277832 hypothetical protein; Rpal_3991 N/A MTSECARTLAWAGSQHTFNLDHPWVRSFLAVRGLPGDNGSSPAACLWRFQQGHGTEEDVARVIELGLIGAGKTRSEAAALVRDNIRSGPLSPHIDVAAAVLSALFVGQGA 4277832..4280048 PHAGE_Burkho_KS9: tail length tape measure protein gp13; Rpal_3992; phage(gi255033744) 5e-16 MAVPALNIPIRADVDKFQRDMNKAADVAGKATMAITSKVIAMNSTFLASQGAAGVATLALGRVLGVVGPLALAITAVKDTFDFLRYSVKLAGDRIEEFNGIAAKAASANVTTDFYQRIEKAAKGAGLSIDDSADALRRFNDATSTKLGGSDLDKRLKELSDAGNLSGNRGLAQLSIATGTEERIRTVVRLIDEAMQKGERLAAIDIAEKAFGSKVAANLKADAGYLDQLLTRADAISKAEIISEADVGRAIALKERMEEAHKILADKWKPIQNDIAELGINYRENTSAIVEKFAELVGLANQLYASLKTIPDIFAELGNSPIWSRLTELTGALGLNSDPAALGIETGIDVGRATANDKLRAALQNRARMMRDMQQASDVQTAVRGDTSRNPAPAKSGEANAFDTTAASIERHTARVQADTKAVGLGAAALDEMRARASLLTAAQQAGIEPTAAMTARIDKLAKAAGEAAEQLAKAKVNSEIDFGRKTAMLSGEDVAIAGQLRSIYGNDVPTALASSEAAALRLNEALRGLSGSIETSLTSGLADIATGAKSVSAGFADMGRVVIRALEEMIVKMLVVQPLMRALSGGVLGFADGGLVSAPSTMMIGDYAMPKFAGGGMISGPGTGRSDSIPALVSNGEFIVNADATARHLPILKAINENALPRFADGGLVGSGAAPMISPGAVVAPTVQVTVQGSPGMTATDHEEMGRRVGAAAMDQIRGMIAKEFRTQTRPGGALRR 4280153..4281001 hypothetical protein; Rpal_3993 N/A MPLERKPEQQEYSSDAFICAAATETKRSKNVSASRSKKVQQRRRRTPFKDAQTLRKISTFELPTAPPAEKPLVAHSHTPCHATSSPSTTSARVESVAPANDNNLPVWELTGDVVKVFAASVALQLEDERRAVGFVFNLTLEAVERASKHPAGFLDRLKRDLDREVKRAGFDLPYWFCIDVDRDKRLHIHGAFLSHDMELPRLRELFRKAWGEWKGPGKDKQLWLSPLAVDDGWGSYSMRNQKRVAKIIGERTFTISQPLRREAQSAYNEIRRIMRSEQRRIS 4281200..4281391 hypothetical protein; Rpal_3994 N/A MTATTMHYVADHIFGEIVETRMRAVRAALGGLRISDFVADQLQSEIVASFIEQRDIAPLSSRE 4281607..4282083 hypothetical protein; Rpal_3995 N/A MAKLNCSIEAQTVLTFRKDGELTHRLLLSRGDLAALLKGNRLAPITGPEENGGVPCSHMAILDDSTDVHLQRSGDIVQLWTSVNAEPLTLSAEQVGQLRDGLNAAARAADDLALEIANIGEPEPDFIEDGSAPISQEQKILDRVYCNFARPKGRHPSA complement(4282672..4283451) PROPHAGE_Shewan_MR-1: serine protease; Rpal_3996; phage(gi24375430) 6e-07 MPLADVFEKVRSGLIHIIFIDEEGAAIAKGTGFLCRGFLITNNHVFAGPRDARVCLRKDGSNEAFCLAGDDFARRLKTGSQESSYDYAVLDIPEIIGSDDFQFQLESPRGRRIGESIALIGFPLEHLNLTCHSGIISSFYDSGVAHVVQIDASVNAGNSGGPLIDPETAAVLGVVTRKSTGLSHMFNLLRNALHHNMEFIRRETSGSGFMIGGFNPSEGIVAGQQQILILLDEIERQANVGIGYAMSSEHLLAEPILQD 4283235..4283246 attR N/A CAAAATCATCGC complement(4283460..4285205) PROPHAGE_Escher_Sakai: putative integrase; Rpal_3997; phage(gi15834496) 7e-26 MAIATNISRRPGSRNYYVRMAVPRDLQVRMGTPGKPRRELRKSLNTPDAREAKRLSRPILDEWERTFAELRRPKQLTEAELQNAIWRRYLELINADERFRQELPTGDELNAIWEYLEAEFGELNITAYRIFEELRDRFESNQRERVERLAQMKVEAARGETKLIADVVEQVIEARRLGVDPGTPEYRKLAQGLQRAELEGLKRTVERDAGDFSGESKDKLVQQPTVFDPPKGEGILELYDRYAREKSGRVSADTWAQNRKVVALFDNFVGGNAHISALTRKNVREWKEKLFEWPVKAIEASEFRGLSFLDTIERNKVVGKPVIQHKTINRYLAALGGFSDWLLANDFIGEQIMQGMYLEVDRRKKTVLPYSADQMRRIFESPLFHRCGGDKLEHQKGNVEVRDWRYWIPLIAVHSGARLGEICQLMTADVRQLHDVWIFHITEEGGAGTKSTKTEGSMRVVPMHSKLIELGFLKYHARMSAMGDRLFPEIKADARGYISGKASTFFNDYFRAIGVKSDRSLNFHSFRHGFADALRRAGYYDEQFGPLLGHTKSTTTGRYGIESEMVIADRVKMVEAVIQAK