gi|184152655|ref|NC_010609.1| Lactobacillus reuteri JCM 1112, complete genome. [asmbl_id: NC_010609].2039414, gc%: 38.88% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 254640..256007 PHAGE_Acanth_mimivirus: probable UDP-N-acetylglucosamine pyrophosphorylase; LAR_0211; phage(gi311978096) 6e-31 MTKRNAIILAAGKGTRMRSKLYKVLHQVCGKTMVEHVLTQLEKAKIDNIITIVGFGAETVEQQLGHRTKYALQEQQLGTGHAVMQTKDLLANEDGETIIVSGDTPLFTAETFEKLFEYHEQRHAAATILTSIAPDPTGYGRIVRNDVGIVERIVEQKDATVQEQAIKEINTGVYCFDNKKLFAALSKITNDNAQGEYYLTDVIGILKQENEIVTAYKMDNFDESMGVNDRVALARANKVMRNRINTHWMREGVSMIDPETTYIDADVKIGRDTVIEGGVVIKGHTEIGNDCYIGAGSRITDSKIHDGVKIISSTLQEAEMHNGSDIGPNSHLRPEAEIGENVHIGNFCEVKKAYIGEGTKVGHLTYIGNATLGKDINVGCGVVFVNYDGTNKHHTNVGDHAFIGSNSNLVAPVNIAKDSFVAAGSTITDSTEQYDMAIARARQVNKENYAKKLPW 256082..257071 PHAGE_Cronob_vB_CsaP_GAP52: putative ribose-phosphate pyrophosphokinase; LAR_0212; phage(gi414087562) 1e-17 MTQQYFDQNLKIFALNSNRPLAEKIAKHVGVDLGKLSVNRFSDGEIQINIEESVRGDNVYVIQSTSAPVNDNLMELLIMVDALRRASAKTINVVMPYYGYARQDRKARSREPITAKLVANMLQNSGVDRIIALDLHAAQIQGFFDIPVDHLMGAPLLAEYFINQGVAENAVVISPDHGGVTRARALAEFLKSPIAIIDKRRPRANVAQIMNIIGDVKGKKCIMIDDMIDTAGTISLGSQALIDAGAEEVYASCTHAVLSGPAIERLRNAPLKEVVVTDSIQLPKEKQIDKIKQVSVAPLIGDAIKRINENRPVSPLFKQVFQSAQLEKK 257247..257984 PHAGE_Pseudo_1: tail fiber protein; LAR_0213; phage(gi29366736) 1e-05 MTTIKFFKKAMVGTAAVATIFALAGCGKQSASSSDTSSSSTSSVRSSESKASKAYRTANKLIQNHDYEGAYEQLSQLNDHNAQTEALADDLQSYMNAQKAYENGDYDGAKNNLKSQKSTSTAMRNAYADLQSKVSSAQGSTSSQTSSSTNSKQTNKQSSSTSSATQQSSSAANQAASDATSDNVVQQFANKMGFSGSQGYQIMPTGKDGNVYKFEVRQNNSDNTVASLIGIYQYNSQTGAVTKIA complement(258063..258884) hypothetical protein; LAR_0214 N/A MAIKLVAIDIDGTLINDQRQITPQTVAAIKKASAQGVKIVLCTGRPMTGVKAYLDQLDLNDSDNEFVISFNGALAQSTSGNVLVNYTMPFNDYADWQTYCIKEGVKSQIETRDYIYTINRDLSPYTVYESDLVSMPIRYRTFEELSKMQDQYVIAKAMMVDTKEQIDKAWAELPAEMRDRFSIVRSEDFYLEFMNKQASKGNALQLLSEELGIKKDEVMALGNAQNDDSMIEYAGLGVAMGNSIPGTLKIADVTTADNNHDGVGKAIEEYVLK complement(258884..260251) PHAGE_Cafete_BV_PW1: putative HD superfamily phosphohydrolase; LAR_0215; phage(gi310831117) 6e-25 MNHFYDEKLRREKVFRDPIHGQIIVDNQIIMDLINTPEFQRLRRIKQLGTSSFTFHGAEHSRFGHCLGVYEITRQMCNYFQRNYPSQHPGDGLWDDHERPVTLCAALLHDLGHGPYSHTFEHIFHTNHEQITRQLITDSSTNINKILQRVSPDFPHQVASVIDHTYENPQVVQMISSQVDADRMDYLQRDAYYTGTNYGKFDLDRVLHVMRPVKRGIAFEISGMHAVEDYIISRLQMYLQVYFHPVSRSMEVILDHLLMRAKYIYQHPNDFEPDFTPHMLMPFFNGKFTLDDYLALDDGVLTTYFIHWTHSRDDILSDLASRFLNRRPFKSVIYDQNTQKLLPTLRKLIQTAGFNSQYYTAVNDSFKLPYDTYHPQDSNTQTQIELLQPNGDFIELSQVSTLVASVSGREAGDQRFFFPKEMLETRNNIEIFEPIYEEFQGYIKNNHIINPKEQK complement(260253..261077) hypothetical protein; LAR_0216 N/A MPNFKNQCFQQFIQPLTPADNLSSFIYTNALLRSASELKFPLLHFWTLEDTVILGLKDQRLPHLSTALASLTHRGFHYFMRNSGGLAVVSDDGILNLSIFYPWHLEDHELTIDEAYQRMVNLIQAAFPSLEIATGEITYSYCPGSFDISVNGQKIGGISQRRNKVGVTVMLYLSVCGNQQDRGKLIRDFYDTGLQQDQNKWHFPDVWPGAMTTISKALNTQLSVQDAIQRIQSVVQIIAPDSLNNLMWSPNFISTLSKELISMERLQERLEKED 261278..261685 PHAGE_Helico_phiHP33: transposase; LAR_0217; phage(gi371671361) 2e-17 MITRELDRNQHSVYLLNYHLVMVVKYRRKVINDEISEYLKHCFVVVGQAYGINLQEWNHDQDHVHVLFRATPHTEMAKFLNAYKSSSSRMVKKQFPEIKQYLWKSAFWTQSYCLISTGGAPLEVLKRYIESQGRK 261685..262860 PHAGE_Lactob_1: transposase; LAR_0218; phage(gi226377715) 6e-105 MVLKAVKMRIYPNSAQRNQLWQTFGCVRFVWNQMLNMQIERRKNNPEAKFVNAFGMNNLLKQLKVEYPWLKQAESTALQSANRNLADAFQRFFKGQNKFPRFKSRKYSQSYNSKYVNGNIKVLDCHHIKLPKLGIVYFRAGRLPMGKIKNVTVRLNVAGQYYITVLVESENQTLPKTSKYIGGDLGLKSLLNLSDGCKEPINHFEDKYRKKLYRWEKLRSRRFLKAQQEITWDHHNKVLVPRQLDDFKNYQKARIMVAKYRQKIANQRLDQLQKFTTKLVKKYDIIVLEKLNTKGMMKNHHLARGIANASWSKLVDILQYKCNWYGKKLIQVNPSYTSQICANCGKNNHRLGLNKLEWLAVREWDCPNCGKHLDRDINAAQVILQKGLAIR #### region 2 #### 892860..893558 PHAGE_Riemer_RAP44: adenine nucleotide alpha hydrolase-like protein; LAR_0782; phage(gi418489897) 5e-20 MLNERERSLNVSLLDQIKTQASITDSVLVSFSMGKDSIAVMDLCFKYFKHVQPFFMYMVPGLQFQEEALAKYEHHYNTHIIRVPHFETADFYRYGSFRDPDYSVPRVKIRGIYAYLRKQTGIAWIAGGEKINDSIVRRAMLKHSGSIDTQRGRFYPVMYWTDKEVKHYIKMNKLLYPKFNRELGFSFHSLAGKELSAIKKIYPQDYERILKFFPEAQAGVLQYEAYKKGGDE 893558..893983 hypothetical protein; LAR_0783 N/A MARQRVMSEQQYLNSKGVGSAVSDYMMDKTVVRKSAYHQRQDERSRKALKQNQDQYYAKRNQARREYRRLVSSGKVRAPTQAEKTWNTAHGLSENRSVQAARRVLAKHGVDWKTGKRIAPARGRGLWPTFTHKGSSGKSSG 894015..894776 PHAGE_Riemer_RAP44: ParB-like nuclease; LAR_0784; phage(gi418489898) 4e-17 MQSFEYGTITRDKVKLADYNPRIIDESNLKELTKGLRTFGLIKPLVINKRTGNLVEGHQRIAAMDKMYRKKDYEIPVAYIDVDEKEEKTLNVQLNNPSMQGSWDLGALADLNADGINWDDMGFNKADIDFMYDGEVDFDGDASDELNGVADGDSSMDEQSVVSKRDTPFDEEVEDEKDKLADMSELNDEDGLEEFNKKKAEFRHKDNDNTIINFYTKVVFPSNDAKKDFYKKANIPANEEYITFDQVKRYFDN 894793..895296 hypothetical protein; LAR_0785 N/A MGRKPLIDEHTSEKMQSYLMAGVSLKDACTLLGIGYTTWNDYERKNPDIRRKRKQWQGMLKARAKMNIAEHVFGNKTKGIEPSAEWSRYLLDSITAQETKNVQNALSRANARKINAETKRIEAETKRLNSNDEGITKIVFSDDLKPDKEDDSKQKGSEDDGADTKPK 895271..896566 PHAGE_Strept_SMP: terminase large subunit; LAR_0786; phage(gi119953777) 2e-123 MEQTLSLSKIVGGGYYDFWHDKHFYRVVKGSRASKKSKTTALNMIYRLMKYPWSNLLVVRRYSNTNRQSTYADLVWAIHRFHAEHLFKCNPSMPEIVYKPTGQRVIFRGLDKALKLTSITVTHGYLSFVWIEEAYEIENADKLETLQESIRGRIDVPGAFKQITVTFNPWNAQHWLKRTFFDPETRKADTFAQTTTFRCNEWLDEQDRQRYLDLYKTNPRRAKVAADGDWGVSEGLVFEDNVERVEFDPQEKLTECGHAGFGLDYGFGGDPNAFVALAIDPKSKNIWIYDEMYTYHQTTPHIADWLKKNGYQHASIYADSASPERTQQLLDLDIDNIQSVVKTPIEAGIDQLWQYKIHVHPKCKNIWNEFNNYVFDTDNIGNTLNRPKDENNHAMDALRYAVRQYMDMYDGSMGVDWGNQYHIAREMGLDI 896566..898227 PHAGE_Entero_phiFL2A: portal protein; LAR_0787; phage(gi281416526) 9e-68 MQNTIPQQHRFDLEANREYQVPVSYFNTIKDYPMQLYETAYKFIRHHIDREVPRLKELMRYYYADTKIKKWAGSPNPDNAHNRVSTGFARYITNIRVGYFMGNDIQYKIATDDDSMKSLSARLDDLLTHYNDNANTPYIDEMLKKDLSIMGRAYDLVYVNEGETTLNLAKIDPTTCFVVYDDSIKAKPLFAVRYYQTGVLDELLRENYEIYTDSMVYRYHSDGGLPETNSPVNSVVFDSQEPLFFERVPLTEYKNNEERLGDWEPEIDQMDALDKAISTMANFQEDFNDAAMVATGRFANKTKPVYAKDKQGNVQMGKDGKPVVLVPPRPIIDPKHHMFYLEPYIARTGLSEGQRTVVTPTLQYITKQYDSAGWSTYTNFLINEIHKYTNTPNVNDPNFASNASGVAMSYKLWGSDQERKIQEALYKRGLRARISACIAYWNKINALPGENDISVLADMVKPNFDPNLPKNDEETAQLVQTLSGIPGLESMKSLREITQRITGVSPDDEQQRIDDEAEEEAKKTDDYKKGRIGIGEVFATGESAQVEQPKGDK 898227..899177 PHAGE_Strept_SMP: putative head morphogenesis protein; LAR_0788; phage(gi119953779) 5e-07 MTDKEWFDQLDKIFNPNSPSVQALRDAVERAEHKQEVTFDHFFNNGLKWNDKANPADVKAVFDALRELRNIAHTPQQKAVVGALLNNLPYKTNLDVAKLTSRINIAMLGLDVAKKLQAEQTEIVNKVTELTGKQHGGYNTQLRRRALLRVATQTGNDTDTLPLIFKHAQRLSMDLDKVIDFQVKNHMNPNSLKKAAKEALEGDKQWNYNSDKWRSTVQKRYMHTKANLERIFVTEAKVSQMKVTAKSLKNNGYKYVKVVSRHSTNVCKYCEGMDGTKVKIDSIVVGINVPPFHPRCACNIIPTETPVKEALEDLGL 899557..900216 PHAGE_Staphy_187: ORF021; LAR_0789; phage(gi66395236) 2e-12 MIMENENEVQTQQPVQEQDNQPTQNEGQEEKPKVEFTPEQQKAISALLDSKIAKERIKADQEKQDAIDKAIARTKMSAEERAKAEQKDREDEFNRKQQDLDRQLREVKTKSTLIDKGITTDLLPLVMGADDDETSQRLDLLDRYVQKKVQEATEKLMRGKQNPINGNSGSNVSLSDNPWSAQSFNITKQQEIFNQDPEKARQMIAQAQPKQGFYVGKIN 900231..901307 PHAGE_Entero_phiFL3A: coat protein; LAR_0790; phage(gi281416261) 4e-41 MADIQQATQLANMQIPEGWAAYQAQQSVEQDQFFQSGVIQAVPSIASAFTGGGKLVNIPMFKPLEDVAPQNIDDTKDIALNTIGTQLAQARLYGFLQAWSATDLSGELSGTDPLGNIGTSVQTYWRHINEKILLGTMDGVYASDSMKDKNQFNAADNRRSDNTFSLKNFNEARFQLGDRYRDLATVVVHSNILKELQNANITDPKTGNTILINGNQLPTQISAPNPGDSIKGVRVIVDDTMPVKDGVYTSYLFASGAFGWSELPTPRAAETGRDALRFQGVDYLISRRRFVLAPQGMSWNESAFAADNPNKPFPGMEDLANGKYWNRVFDPKIMPYVKFTTTDEAIKQGTTTPTAPTK 901320..901685 PHAGE_Lactoc_1: ORF38; LAR_0791; phage(gi13786569) 6e-10 MAELDATNDIQRMQTLLGIDLDDADKGRVEAYIVQAKQAIMVYIRKYLDDNNFPTELNYLVDQLTLAKYNKFHNEGMNSISEEGLSMTFNSNDLKDYLPDIEAWIDSTGKGDLTGNAIGWF 901676..901999 hypothetical protein; LAR_0792 N/A MVLMRYDQTVYLITETANDGDDLNFEGTTTAKKVKANVKRTNLTLGNGEMYDATIVRVFGECEADEIGFADYDQNSGRGARKIQKVGRHFNRTDFYIVNSEVIFNAK 901989..902549 hypothetical protein; LAR_0793 N/A MPNDSYENLPRVNFSVNTSDFERARAVAQNLARMGMPEAMDEFNREYARAKAASKIFIRNAAAEEVDEAQKIESQKVGHSKSGYVPTGTLQGSITPQFSEDGMKVSVVPLATAEDAEKARKQISQGVKKIRKVNKPSKNEDAYYYGTAVEFGKGRNPKEPFMKPSGEKVAAHLDKKFEDTMRQALE 902971..903618 hypothetical protein; LAR_0794 N/A MAGFTASDANIDPNSMSLADKIVYGCMFEWDKPEDKIHLLGLQAATSTTDNLASQAVNLKGGSMHAPGATTETFVVDSYWRKIDNYIQRSLRRCVHEKVRLGIFRFDFNRMRKDPKDPTKFIVPGLFGKAYPNGVPQTEAVNNLLHSNITYNIDGETQEGVTGQDEMEPALYQIGLKLYTYAHNTDMGGTMDPIADPMDVYSQNNGGSTTPAQPK 903638..904183 PHAGE_Bacill_SPP1: hypothetical protein SPP1p033; LAR_0795; phage(gi22855078) 6e-06 MQALTVQVNPQAQPAVFTPKLNYGFYLQTRDDKSLAKNGQDGFSALVNGLLDENVDMIIAAYHHSFAWYNRSQPSATAVEEALETAMFNDEKATDEAFDDILKSLQANDFLARKLNEFIKNNDKLTATMKKHIESMTDEDKKDQMEIGMTQIDDSTTKLQQLMTPQESSPKQDESDSHLLN 904276..904455 hypothetical protein; LAR_0796 N/A MPQQTVPFEPQQSIADLIKQLQERNQAIGKDIAEGRDEQPQVPKKTIASQLLMEMLGGG 904459..908109 PHAGE_Strept_Sfi21: putative minor tail protein; LAR_0797; phage(gi9632950) 2e-115 MSSPVVAKEFLWKFRDEITQGVAKARQAMQEAVSVAKEAGMKVSDTGEDWKKMGNDAENSARKASQAVKESANASRESIEKVRVLTEKLNDTVARIPTSKSFNLKAKFDDNKLKTFSRKIHDIPKQKSLWLRIKDGFSNYLKNAQQDADNTKKSFSNLREVMTGTFLGNAVLNGIHGISNGLKGLIATGYQYTRQQQTMIASWNTLTGSASKGQEMVDMTNKLAISAQNSTEMVNDLNQKFYAVTNSAGKTKDLSQAVLTLQDAFNQSDASIENFSTQWAQMVGNGKASAQDMLSIQNVFPKFRQELLAYERDATHNKNLTMQQMNDMMSQGKISSKAMNDVLIGMGHKYQDATKNFTNTLDGMGRIIKTTAPRLLGAMVEPFTKAQNPIYKAVSNWVSDPRTLKEFQNAGKNIANTFNSTLNGLSTAFHGLGQVMGPVMKSFGSGAWVGFSTTLKVIAEGLVTITSFAGKVASSITGISKRLGFLKIQQAAAKALGVAFGGLVAVIATYKTVSLASTAVTKTFAAAQAALNVVMDANPIGLVVLAITALVGAFVLAYKHIKPFRDMVNKTGEAIKKLFTGKYDWEQSFGKGLSKLGKSFQNFAKKIPQFFKGVGKAIIKTIVIGLALPVGIGITLMKPLIKPLQNSTKSLIKTVQKQWQSLSKWLGKLFDPVAKLWNRVWNGWARIFSTVWKSLKKTASSGMKAIERLISPAVKAIEKVWVTSWDAIASFFSGIWHTITSLGGNGMRMLHSAIAGPLNTISSIWHSVWNSVSSFFRGIWNGIKQAAQDGMNGVINVINAGIGGINKVWSFFTGHGTGVKELGHVHFAQGGTVHRHLSVINDGDGPDWKELVQTPDGNLFMSQERNWTGFLPEGTRVYSGAETRQIMNTVGVSHYAAGGIVGAQHFADGGIIGEGIDWAKGSLENIGSWLGDKFSALEDFLADPLKATKGLLEKATSGLYKGLGNFADVAHGAMDKLTQPIADWFKKGLEKLEAQFESGGASPDLIRAAAAKMHVAISGADISHIMNVIKHESGGNARAINNWDSNAKAGHPSKGILQFIDGTFRKYAVAGHTNIYSPFDQLLAMFNDTTWRSDLTLGGWGPTGGRRFATGGEVFGLTNAIIGDNPEHHEFVLNPYAVSAEPLLDRAFEATAQAQPANSSTGNGNSKLDQMIDLLGKVLVAIENQETDIYLDGEKITDNSNKRNAKNWSLRKGILS #### region 3 #### 903569..903584 attL N/A TTTATTCACAAAACAA 908106..908993 PHAGE_Staphy_2: phage tail tape measure protein like; LAR_0798; phage(gi156604006) 4e-13 MIQVFTQSKIKPHRYGYGDMDNPAFDPIEFSISRDGINWVSEFDNLELKGVYCYKAPDVQPANPVDNLQKVALMDGSRLLSTSYGTRELKMEMIFIGMDEGDAMLAYDALQRFLISRDPYWICFANWPQRMYYVRAKLAAPTFTSEKAWTCEVTFTDIIGLSRSVGTTQEPVLGFGNNLEVQPRYSFNSNSFTLVNTSDVLIDPERRGHPFKMTLQGSSSGKMKVTNTTTSTSIYKESGFNGSFVLDGVEPSCNGKNCSLDTDCGIITLQIGENHFKVENFNGTISFDYPDWWLS 908981..911221 PHAGE_Lactob_LF1: phage-associated protein/endopeptidase; LAR_0799; phage(gi418489399) 1e-117 MVIMSEFVWLTNGISNKLATEARKADWQDMHTSFKANFQLSSAYEISFTLTYTEQYKDAFNLVKEKRYVNYRGHDYLIQQVEAKHDENGLATLQVTATHRLIDAMKDIVLYSTIPTEGNPEVSGGGSSDSGDGDSGDPQPGIVTKQTAVQQTYPLNERLDHFFNPNEWGITYKLHGNFPQAAVDCTGSLYEWLNSNLKLFGAYWKPDSDMVVGIYDLESLKKPTNKVFRYLHDMSNVDIQSDATNLINDVWVYGGKMEKDITSVLGPGGQTNGATEPQNGDWTPVIQNAASLIGEKLSDADIANIKNRIRIESNGNETIQNNWDSNAQAGHPSIGLVQFIQSTFDYYCRPPYTDIRKGLDQLIAMMNIPNWRQQIAGSGGWSPHGAPISKATIDIKSVVDNSWGWPFPCGEGHFLGGQLFGVNPGGEFRRNGFHDGLDFGSIDHPGNEVHAIHSGEVKTISWGDGGIGFYVVIQDSSGLNVEYQEAFSNQSNITVRVGQQVKTGDVIGYRTTNHLHVGITKHNFPEAFSHAFSNDGTWIDPLSTIKTGIANGGSTPVSSSDGESTTSTTSETYYSLVYHFENQESIDKYGRRKGAPITVDSIYDLDALKKYAENTVQYNPDTTLTISDFTGEAELGEVIRLIVPERNLNTDVTLVGVSGNSDYFDPNGVKELAFNNTGLAMKDVNAAIMKDLHDINTGTPQLNYYGATGGREEDHWANIKFNDKQMDYLKSVTKAGGEIKKDGNKH 911190..914786 PHAGE_Lactob_LF1: tail fiber; LAR_0800; phage(gi418489400) 2e-55 MRLRKMATNTDGREEIKPVAPTEQTKWRDPSLVGKYMVDPKTGLAGLFRSPDNGETWVLTDTVYGHVYNQDEVDNIWDNGAAHKVADEIKSATADLPNVRKQADEAVKFAESAIAASKVNSDAIVAQSSAVVEAKSAMDSATAEIQQLKANAASDVAQIESTIAEVQAGVNQAKSANKSAVQAVQAELKLTSDSMDKVEKRLDEVDTSLDTYAKSATEQGHDITLIKQKQGQFEADFASAQGNVNQIQADIKGLRQNVKDNQGNIATLLTSADKLQASMTDAEKNISNLLLTASKYEQTFKDQDGRLSKVEQTATEHTSVLADAKGNIDKVTQKADNLQLLLSDAQKNIQNIQLDAKGLHDTLTGQNNQLASLNVTLNNLDSKYSGITGDLQSKQTALSTEQQQTKDMLLRKADRSEVDSVKGTVNQVSAEQKTMADQINQKVSSVEYQTLKDKVNGMKIGTRNLLHHSDTFDGWIKGYSVAVTADKYLDGRIAILGGAGVDGGQLTTFLDGPYNDDLVTWVVYARAENAGDKMHTELWGGGGCTDQSLTTKWQAYKFSGHRNIDHPDFYLWGCVGNKGNIYVALPFAVVGNYIGTWLANPTDTITSINKNATAIDENSKLISLMAKQTEVDNVKNTAQQISSRLDILAGEVKSKVDETRVNSIVDGKGYATTSTVQSLVDQKAGTLSDTITELDRKIGDNHSDSIKRIQSLTASIDGLQSRVTNYQNDTSSKYTQLSNMIQSKVSASDFNALKDKATWKSTDSIDLNTAVLQQKIFVKGGSNLPPGNYWWYVQVEPGYDSRIVQYAVSDRDNIHYSRQYDGSKWSAWTQDASESEITQLRDDINLRVQKGELLSQINLTAGNTLIQSNKLYLDASSVVITGTAFIPSAAIASLSADKINTGTLNTDKISLSNGHVRLSSDDDHFYVQTEENAVNNPTTRFNFDGIDFMDSSYGKEVPQYSIGYDTSSADRHLYINAFDHFNSGGTTASQLWYSMVPAISLNNQEINFAAKGNMHMQVVDGGVNIKPTLFFQNNTNNGTYTGFTRLDNSNTVEFNTGDNNGENFHVNSGARFMKYVYFNDYCRAQGWLTYSTLSKKTNIKKLDTSLALDKIRQDDQYLYEYKRNVAKGVYDPQASFIIDDVNDVSQYSVPREFIDQSGKYREPSVELSYLIAAFQEIDKQVQTQKEEIKELKEKLQHE 914779..915051 hypothetical protein; LAR_0801 N/A MNNNDLLVQTARELAARLSNAEIDRASFRAQAIELQNENDRLKKQINDLQDELGKQKQAKKDQSEVAPKTVTDDQDTSTTETEQDPQANK 915094..915366 PHAGE_Lactob_LF1: hypothetical protein; LAR_0802; phage(gi418489402) 8e-14 MMNETQLSSFNYQFDTNTGKCLYAQVGLHNESADSTEFVNASIRVKPDDLPEGKDFMQLSMKDLITIAKQKLAADTAIKKENQNTEPNNQ 915379..916524 PHAGE_Lactob_LF1: GDSL family lipase; LAR_0803; phage(gi418489403) 4e-82 MTKLVAFGDSIFAGWDGKENVSANQRIPELIGQHLGWQVTNVAIGGTKYDNSSNGFTAMVNKTDVSGFDYALVSYGVNNFSWPEALATVKQNAVNGFEALKRKNPNIKILLELPTEDFRQGSKTLYDVNDAFWNQNQLDDMLIDVAKQEGLEYYDWRPDPLITYENANQTLGDGNTGVHPTKATMRAIAQRLAEKFKQMAGGTVQPSPPPHIDPPHDNPPKTDKPENKPQPPVVKTVDELRLDRLADLFGIGTNVSNGINRTLNKINELYSQMHNLMGTDSKQVQATLIAPDNALTRPLRNYVLLSFFNLEREVNELISLCNSNWLCDPETGAKTSLLRLLRVDSLATDAHYKDTVNYNWYLIENKLNTLIGYINKILKGE 916521..917636 PHAGE_Lactob_LF1: hypothetical protein; LAR_0804; phage(gi418489404) 8e-65 MIMADLIEAKDRNNRIILDTTVSADTTVKMPAMNGHQGDNGRVVPFVIVQGPNHLPMNMQGKSIDLVGVDHDGRLKISGATYKVIDPSVGTLDFTIPGAFYQALGDYQQAYFRIKDSNNQVISTINVAFTTLAGADYMTYGDSKIFNGYVSQSMAGVEQEVANWVNQLKAMLSGTEGAADVARSAVQALLAAISANQVATFGGNNNFTGENKFHGVTEIDNLQGPARQALFNYTDNKFNGLTSQLNSITGRLANVLRTDSAWTRDYTLGGCLSRANNGNDFALSKFHIMQNVNLILGRGDVKVDNDQDFNESQIYLPWTVDNADVAIAQMYHFEGYALPRLDIDSKKLNISLKGKRHEIERLSLVIIAFDR 917639..918052 hypothetical protein; LAR_0805 N/A MSNMATIYVYNKNNLFVGRKDNINLEAYELADNESINKPQTVYEYDDSYHLTGLAKIKPGTVIANATHTVPPDGLNDPTYDPANNTWHGISNDEYRKLYNVPASEPDGSAKLINALTQQVFQLTQKVNQLEKSDQNG 918036..918164 hypothetical protein; LAR_0806 N/A MIRMVEIIRMLAQQYADIRWAVEDGAITKEQYKKFTGKEYSE 918203..918754 hypothetical protein; LAR_0807 N/A MWNVIGTGLVAGLIASMTNILIAHLSNRTQRETTKMLNLEKTNEVTLEWNNETRDLISKFVKACFQTHQVYNATDGLVGRFSEAIKSNSNDRVFDNITEDAKAAIKKSNQTSSELYALQAQIRMHLYDDHDYLVTDINNQIEKVIENLESNRSLPAKEIDDLVDLSREYFSIQWERIKKENVR 918721..919962 PHAGE_Equid__4: envelope glycoprotein J; LAR_0808; phage(gi9629801) 2e-06 MGKNKEGERPIGRFYFAQNRREKQMRTLTIADNWKDWKFGDTDAVMTFNAQNDGQTPDFTNKTLTFKIADSAASTPDNPKDYVASAAGYVENNKVLLKTEDVKTLTPGTYSVELWVMDNSTEKNAIYPSKGFAFFSIEENTMKVSDITNVPSKTLEAIYADLKQQVGAIKKGSQGEPGKTPKIVMGSVTKLSPDAQPSATLVPLQSDPNTYTLNLQLPQGVQGEQGLQGIPGVGSKGLDGNNGLTPTIDPKTKHWMIGGTDTGVIAEGQAGKDADPSKYVTIVSFNQLRQQVQDNATALDALQKSAVNKDLQTQIANLTSQVTDLTAQVKALQEAKSDTSKSDEPAKSDNKDDQPAKSDTPTSSADSPSTPASSSTTTPDSTPASSSSSDTSDNKSASSSAETSATPASDTTN 920410..921615 PHAGE_Lactob_A2: lysin; LAR_0809; phage(gi22296540) 1e-52 MIVKNKSFKKAKNLALATMAGAFLVGSASVASANTGWQKQNGTYTYYENNGKVERGRQYRQLPKANPGTSWYLTQDGKMLTGVQQWQGSYWFFNQDGTLHTKRDYVQSQWGDWYMIGDNGQVLSGVQQWMGSYYYFEPGTYLKANKQEYVKSQWGDWYMVGKDGRLMSGLVNWQGSKYYFDPSTYLKVTNTDVTVNGVTYHADQNGILSEVQNTGFTPSQINHTYDLADWQGSSQTAINDYIIMHDVGAESGAAANANYLRNNWESAYTQFVVGDGGQVFEVGEPGYVSWGALNANPYSPCQIELGRTYNRSQFIKDYTAYINVARYYAKQYGIPLNLDAGGAGTPGVKTHNWVTENIGGSHVDPYGYLASWGIGYNQFASDIANGVNQQQLNSVVYSQRQ complement(921867..923396) gluconate kinase; LAR_0810 N/A MNYFIGVDVGTTSTKAVLYDQNATVLDQFSQGYSLYRDASGMAEQNPTAIVEAVEKVIHDAAQKADLTNGKLLAVSFSSANQSVIMLDKNFNPLSRVITWADTRARDVANELKNSPAGQQIYAKTGTPIHPMSPLTKIMWLNKTQADKVAQTAYFGDIKSYLFHQFFNTFKVDVSIASCTGMMNVNTCDWNDQALELANVDRSQLPEIVNGTTQAIGLTATAQAKMGIPADTPFVYGAFDGALSNLGVGAIKQNTVAITIGTSAGVRVVTDHPVIDPQQRLFCYAVDKGLWVIGGPLNNGGDVYQWAVEHLVDASAVKNENIDPYTLANQVIEGVPAGAHGLLFHPFLGGERAPLWDANARGSFFGLSHIHTRADMLRSVMEGICMNIATVFQAVRDLVGNPASVTATGGFARAEVWRQMLADVLNCPVNIPNSFESGCLGAITMAMKSLGMIENYEIIKTLIGDISSYQPNQEAVNVYQNYLPLFQQVEGLLTPAYSTIAKLQQQSIH 923624..924157 putative acetyltransferase; LAR_0811 N/A MKIRKATMADLDVVVDILRDGRNQLAERGVDQWQGDYPNVTHVKEDIENGYAYIVKADDGQTVGTLAIVEAPDHFYDKLNGEWLINTENYVVIHRVAIHSRHAGKGYASKLFLSLIEYLETERPEIKSIRLSTNENNMAMQRIATKSGFKKVGTLHGVFRPSELSYVYELLTKVRVA complement(924665..924895) hypothetical protein; LAR_0812 N/A MAKGSIIMEINADALKNFQDSKFNFVDADGNDVDFDNLDESVKYTLRDGETVVEDDMHAKDVVDTINNEYGKTMNV 925644..927581 putative amidase; LAR_0813 N/A MYNFGGIVMKKHWKLRFTLSLLVPLGFNLFYSLPTHASETNIQTNVKVDAQSSKTITSTENQSALVTAQQVKDQQIDSQQLVNDTYQKIAENKDLNSVIYQDPVNARQQVNALPDTNTTSEQPFYGVPILIKGLGQAYKGYPNTNGLPYMEDNRYGYTKNFVAKLQKMGFVIVGETNYPELGLINVTDSNLYGPAHNPWDLTRNAGGSSGGAAASVAAGIVPLATGNDAGGSLRIPASWSGVIGLKPTQGIILGDSLTPSVVNFAETRRIDDTIKLFEGLLDPNRKSLLKEFPLKLQDLKIAYSLKSPVGSVVSVDAKAAVLNAVTFLRQQGFQVVEKDSPVDGVKLMRAYYLGALSDGTVANYLAQQKLHRNLQASDVTEHLVSPMTYALYEASKKAPKEIKQTYNNELALVAAQMKSFHEEYPIYLTPTTATVAPLNSDPAFLPADVAKILQMAKMPFDQQMDVIYNAWYHGLSKTPFTQLANLAGEPALSLPTYVNAQGLPLGIQLEGEKGSDLILLALGKLFEEKGKLIFLSDYQKLNNDTQPSEPQNEDAANISKVVVHNLGKKSVYEFQTASSKLNISDNISPKYVVKTSQQVNARKLQSTKEKQLPQTGSNNNDGLVLLGLALFSLSLTSVYQNKRKF 927663..927938 hypothetical protein; LAR_0814 N/A MSLMQNTSEINKTDKQVYLITLLRKSTNMPQYIDHMIYETAEGGQEFMARLVEAFSRAGYREKKLSDDKYNLDNGLDKITLRGSYQPIYKG complement(927999..928490) hypothetical protein; LAR_0815 N/A MFEAYKYYWENAFKYRATSTRADFWWPVLVNFIIFVILYFLLAIAGFASVTSIMNGYNRGVGFLIFLLFVIAVFAIAIIIPGIAICVRRVRDTGLTGWTVLVFWLLSLIFTSNDSAVMETISSVIDIIFLVILCLPTGYVSKHGWWSANYGNDITVPSLRNDD 928800..930332 PHAGE_Acinet_Bphi_B1251: putative restriction-modification protein; LAR_0816; phage(gi423261981) 1e-21 MATKSKELNIEDKLWKAADALRGSMDASEYRNVVLGLIFLKYASDSFEERRQELLKTEYPEDAEDPDMYLENNIFWVPQEARWAKIEHAAKTPQIGEVIDDAMTAIEKSNDSFRGILSKNYASPDLDKTRLGEVVDLISDIKVGTKESTDKDVLGRVYEYFLNEFASQEGKHGGEFYTPRSIVKILVEMIEPYKGRIYDPCCGSGGMFVQSEEFVRHHQGELKDLHVFGEESNPTTWKLAKMNLAIRGIDSDLGPHQGDTFTNDLHKGVRFNYILANPPFNIKNWGGEKLQEDARWKYGVPPTGNANYAWIEHIISKLAPDGKAGFVLANGALSTSNKEEFAIRKAILEDDKIDAIVALPEKMFYSTGIPVSLWFVDMNKESEDERSRKGETLFIDARNLGEMIDRTHRAFNDDDIKKVADTYHAYRGTNDQEYKDVAGFCKIAKLDEIAKNDYVLTPGRYVGLAKQEDDGESYEVKMKRLTSELKEQFEESNKLQAQIKDVLKELGYEI 931508..932482 PHAGE_Achole_L2: integrase; LAR_0817; phage(gi9626516) 2e-14 MQRVESEKLIQKMLPYLNNQQLLCLRNALDELITTENKQVDNHKDNQQLLTKYFASKRAEGCSEKSLKYYKTTITKALASIGKNAKEIVTDELRNYLTNYQEVHNSSKVTIDNIRRILSSFFNWLEDEDYIIKSPVRRIHKVKVSTTVKETYTDEELEKLRDNCKDIRDLAMIDFLASTGMRVGELVLLNRDDINFQERECIVFGKGSKERIAYFDARAKLHLQKYLYTRTDSNEALFVSLYRKHTRLTIGGVESRLKHLGKRLGISRVYPHKFRRTLATTAIDKGMPIEQLQRLLGHKRIDTTLHYAMVKQQNVKIAHRKYIG 937759..937774 attR N/A TTTATTCACAAAACAA #### region 4 #### 1191956..1191967 attL N/A ATTATGAATAAA complement(1192522..1193904) PHAGE_Bordet_1: reverse transcriptase; LAR_1036; phage(gi41179367) 5e-12 MRQSQKTEQQADRLSRIGLENRKYTRARSTDYGEGKGMSVTIQDLVLDRNNLNQAYLRVKRNKGAAGIDDMTVNDLLPYLRENKTELIASLREGKYKPAPVKRVEIPKPNGGVRKLGIPTVVDRMVQQAVAQILTPIFERVFSDNSFGFRPHRGAHDAIAKVVDLYNQGYRRVVDLDLKAYFDNVNHDLMIKYLQQYIDDPWTLRLIRKFLTSGVLDHGLFAKSEKGTPQGGPLSPILANIYLNELDKELTRRGHHFVRYADDCNIYVKSQRAGERVMRSITQFLEKRLKVKVNPDKTKVGSPLRLKFLGFSLGVDHNGAYARPAKQSQQRVKKALRLLTKRNRGISLTRMFEEIQRKMRGWLQYYSIGKLTDFIQRLDKWLRARIRQYIWKQWKKLKTKVTNLQKLGLSQRDAYVFASTRKGYWRTAHSKTLSYSLTNRKLEQLGLMNMSKTLQSIQSD complement(1194400..1195227) PHAGE_Cafete_BV_PW1: putative apurinic-apyrimidinic endonuclease 1; LAR_1037; phage(gi310831095) 2e-42 MKFISWNIDSINAALTGTSVRAGETREVLKKIAVMKPDVIAIQETKLSKNGPTKKHLTVLQELFPNYEVAWRSSVEPARKGYAGTMYLYLAQYEPKVTYPKINAPEPMDDEGRIITLEFPDFYVTEVYTPNSGNGLKRLDERQTWDDCYRDYLHELDQQKPVIASGDFNVAHEEIDLAHPATNHHSAGFTDEERTHFSKLLAAGFTDSFRHLHPDEKGVYSWWAQRVITSKQNNSGWRIDYWLVSDRLADKITEAGMIDSGERRDHTPIILEIDL complement(1195230..1195565) PHAGE_Entero_BC_611: nucleoside triphosphate pyrophosphohydrolase; LAR_1038; phage(gi392972820) 3e-20 MMNYEDLFQKIDEWAHERGIDHADPRVEFMKMAEELGELSSAYNKENQTKLIDSIGDLQIALLIFCKLVGVDHQQALTAAYQEIAKQTGKTTADGVFIKESDLKLRNKKEK 1195703..1195936 hypothetical protein; LAR_1039 N/A MKQMDLTKYRIDPAKFALACVQSSPDLTTEDKLRVYKEAYEEALTFYHQIQTAVINKGRSKEDRSLKEMGDFFDLKN complement(1196399..1196857) PROPHAGE_Salmon_Ty2: transposase; LAR_1040; phage(gi29143766) 4e-42 MANKLNSLAHTKWLCKYHIVFIPKYRRKAIFNQYRRDLRDYIRLLCKYKGVEIIEGHMMPDHVHLLVSIPPKLSVSQFMGYLKGKSALMMFDRHANLKYKYGNRHFWAEGYYVSTVGLNESTIKKYIRDQEKHDIAMDKLTSVEYSDPFKGK complement(1198095..1199294) PHAGE_Lactob_A2: lysin; LAR_1041; phage(gi22296540) 3e-53 MKNKSFKKVKNLALATMASAFLLGSASVASANTGWQKQNGTYTYYESNGKVQKGRSYRQLPKANPGTSWYLTQDGKMLTGVQQWQGSYWFFNQDGTLHTKRDYVQSQWGDWYMIGDNGQVLSGVQQWMGNYYYFEPGTYLKANKQEYVKSQWGDWYMVGKDGRLMSGLVNWQENKYYFDPSTYLKVTNTNVTVNGVTYHADQNGILSEVQNTGFTPSQINHTYDLADWQGSSQTAINDYIIMHDVGAESGAAANANYLHNNWESAYTQFVVGDGGQVFEVGEPGYVSWGALNANPYSPVQIELGRTYNRDQFIKDYTAYINVARYYAKQYGIPLTLDAGGAGTPGVKTHNWVTENIGGSHVDPYGYLASWGIGYNQFASDIANGVNASQLNSVVYSQRQ complement(1199284..1199655) PHAGE_Lactob_LP65: hypothetical protein LP65_gp089; LAR_1042; phage(gi56693137) 3e-11 MKLKTVIKKKFLNPDGTINKTVVASFITLLIVLIQQVMMAFGFTYGHWDQVAAIINTLLTILGLCGFVEGNGEVTTSTVETGVDGVKTTISNSSIKLNTDKTIFSGKSFIPNQSNKEDNPNEK complement(1199993..1201153) PHAGE_Lactob_LF1: hypothetical protein; LAR_1043; phage(gi418489405) 3e-06 MGKNKEGERPIGRFYFAQNRKEKHMRTLTIADNWKDWKFGDTDAVMTFTALDDDKVPDFSNRTLTFKIASTLNNDLEHPKDFAATATGYIQDKNVILKTEDVKQLTPGNYIVELWAMSNDTQKDAVYPSKGFAQFTIEENSMKVSDVTNIPSMTINAFWNAVMQKVGTLTKGAKGDPGKTPKIVIGSVTKLSPDAQPSATLVPLQSDPNTYTLNLQLPQGVQGEQGLQGIPGVGSKGLDGNNGLTPTIDPKTKHWMIGGTDTGVIAEGQAGKDADPSKYVTIASFNQLRQQAQDNATALDALQKSAVNKDLQTQVANLTSQVTDLTSQVKALQEAKPDTPASSADSPSTPASSSTTTPDSTPASSAPATNASSASTSETSASSAAQ complement(1201120..1201671) hypothetical protein; LAR_1044 N/A MWNVIGTGLVAGLIASMTNILIAHLSNRTQRETTKMLNLEKTNEVTLEWNNETRDLISKFVKACFQTHQVYNATDGLVGRFSEAIKSNSNDRVFDNITEDAKAAIKKANQTSSELYALQAQIRMHLYDDHDYLVTDINNQIEKVIENLESNRSLPAKEIDDLVDLSREYFSIQWERIKKENVR complement(1201710..1201838) hypothetical protein; LAR_1045 N/A MIKMIEIIKMLAQQYADIRWAVKDGAITKEQYKEFTGKKYAE complement(1201822..1202235) hypothetical protein; LAR_1046 N/A MSNMATIYVYNKNNLFVGRKDNINLEAYELADNESINKPQTVYEYDDSYHLTGLAKIKPGTVIANATPTVPPDGLNEPTYDPANNTWHGISNDEYRKLYNVPASEPDGSAKLINALTQQVFQLTQKVNQLEKSDKND complement(1202238..1203353) PHAGE_Lactob_LF1: hypothetical protein; LAR_1047; phage(gi418489404) 8e-65 MIMADLIEAKDRNNRIILDTTVSADTTVKMPAMNGHQGDNGRVVPFVIVQGPNHLPMNMQGKSIDLVGVDHDGRLKISGATYKVIDPSVGTLDFTIPGAFYQALGDYQQAYFRIKDSNNQVISTINVAFTTLAGADYMTYGDSKIFNGYVSQSMAGVEQEVANWVNQLKAMLSGTEGAADVARSAVQALLAAISANQVATFGGNNNFTGENKFHGVTEIDNLQGPARQALFNYTDNKFNGLTSQLNSITGRLANVLRTDSAWTRDYTLGGCLSRANNGNDFALSKFHIMQNVNLILGRGDVKVDNDQDFNESQIYLPWTVDNADVAIAQMYHFEGYALPRLDIDSKKLNISLKGKRHEIERLSLVIIAFDR complement(1203350..1204495) PHAGE_Lactob_LF1: GDSL family lipase; LAR_1048; phage(gi418489403) 3e-82 MTKLVAFGDSIFAGWDGKENVSANQRIPELIGQHLGWQVANVAIGGTKYDNSSNGFTAMVNKTDVSGFDYALVSYGVNNFSWPEALATVKQNAVNGFEALKRKNPNIKILLELPTEDFRQGSKTLYDVNNAFWNQNQLDDMLIDVAKQEGLEYYDWRPDPLITYENANQTLGDGNTGVHPTKATMRAIAQRLAEKFKQMAGGTVQPSPPPHIDPPHDNPPKTDKPENKPQPPVVKTVDELRLDRLADLFGIGTNVSNGINRTLNKINELYSQMHNLMGTDSKQVQATLIAPDNALTRPLRNYVLLSFFNLEREVNELISLCNSNWLCDPETGAKTSLLRLLRVDSLATDAHYKDTVNYNWYLIENKLNTLIGYINKILKGE complement(1204508..1204777) PHAGE_Lactob_LF1: hypothetical protein; LAR_1049; phage(gi418489402) 4e-13 MNETQLSSFNYQFDTNTGKCLYAQVGLHNESADSTEFVNASIRVKPDDLPESKDFMQLSMKDLITIAKQKLAADTAIKKENQNTEPNNQ complement(1204820..1205062) hypothetical protein; LAR_1050 N/A MNNNDLLVQTARELAARLSNAEIDRASFKAQAVELSNENDQLRKQIEDLKTKLSKEDDKKTDSQTQTTEPETKQDPQANK complement(1205055..1209134) PHAGE_Lactob_LF1: tail fiber; LAR_1051; phage(gi418489400) 4e-42 MEKTLKSQIPIKILTTANSNDLNKSSVVLIRANQIDTEKLVGLAEKANAKIHALVNYSGASDVLNLLQNLSNQGFVEGSYVFINIEDVGNINEIQSIYSNLRQGGYYVGLVNTVKGFASLDKDDVKNISFYKMIDQDGDNSITVGDTDGYINGLNIDLTEKLNKQPITRKERNTYTNVDVNTDSKGWVGIGQDTVLGGGKGFGYSTMGNDFNTVISPKGIIFRRPDAERMWELLKPKQQAEVSELLDHTVADEIKNQLPGLEKARQQADKAVKFAESAIAASKVNSDAIVAQSSAVVEAKSAMDSATAEIQQLKANAASDVAQIESTIAEVQAGVNQAKSANESAVQAVQAELKSTSDSMDKVEKQLNEVGTDLDTYAKSAAEQGHDITLIKQKQGQFEADFASAQGNVNQIQADIKGLRQNIKDNQGNIASLLTSADKLQASMTDAEKNISNLLLTASKYEQTFKDQDGRLSKVEQTAAEHTSELTDEKGNIDKVTQKADNLQLLLSDAQKNIQNIQLDAKGLHDTLTGQDNQLASLNVTLNNLDSKYSGITGDLKSKQTALSTEQQQTKDMLLNKADKSEVDSVKGTVNQVSAEQKTMADQISQKVSSAEYQTLRDKVNGMKIGTRNLLHHSDTFDGWNKGYSVTVTSDKYLDGRIAILGGAGVDGGQLTTFLDGPYNDDLVTWVVYAKADNAGDKMHTELWGGGGYTDQSLTTEWQAYKFSGHRNINHPDFYLWGCVGNKGNIYVALPFAVVGNYIGTWLANPDDTITAISKNTTAIDENSKLISLMAKQTDVDNIKGTAQQISSRLDVMADQIKSKVTSTDVNNIVDGKGYATTSTVQSLITQTAGTINESITNLDAKYNATVTQVQSLTASIDGLQSNVTNFKNDTSSQITQLSNVIQSKVSASDFNALKDEATWKSTDSIDLNTAVLQQKIFVKGGSNLPPGDYWWYVQVEPGYDSRIVQYAVSDRDNIHYSRQYDGSKWSAWSQGATESEITQLRDDINLRVKSGDLLSQINLTAGNTLIQSNKLYLDASSVVFSGRAFIPSAAIASLSADKINTGTLNTDKISLSNGHVRLSSDDDHFYVQTEENAVNNPTTRFNFDGIDFMDSSYGKEVPQYSIGYDTSSADRHLYINAFDHFNSGGTTASQLWYSMVPAISLNNQEINFAAKGNMHMQVVDGGVNIKPTLFFQNNTNNGTYTGFTRLDNSNTVEFNTGDNNGENFHVNSGARFMKYVYFNDYCRAQGWLTYSTLSKKTNIKKLDTSLALDKIRQDDQYLYEYKRNVAKGVYDPQASFIIDDVNDVSHYSVPREFIDQTGKYREPSVELSYLIAAFQEIDKQVQTQKEEIKELKEKLQHE complement(1209082..1210839) PHAGE_Lactob_LF1: phage-associated protein/endopeptidase; LAR_1052; phage(gi418489399) 3e-28 MVMLMNGDKLIIEDIHGKRAALKAVLFDQVEWTYAVNGDYTLTFTAYDDGSEAYSMLTNQSWVYDHGEIFVIKQVSDAPSQGSSAIQVTCSQIYTELSRSKSVDGNTDWGDIGHKASPDSNAPNQTNQDNKDDENTSLTPIGPEQIMKYYIGDANNTNGNNWLNFTWEIKGQFDPQPVALDAVSLKTGISKITETWTDAVIFPMAKHITVYSHDEFYKDRGHRLDYLNNVSDIQIDIDSNSIINEARCVGATYTQQDTSTTDTGLPNGTITSGKGAQAVINDAKKYLGVPYVYGGAGGTRGGNPWSGMDCSSFVSQVYQDFGIRVPAQTIAMEPSFHQVSTPQTGDVGFYGPHGGTHHICLMLDANTMIYEPEPGESCKIEPVSYYPPSWYARNDQMAAVVSQGASDEDDGTDATTTTETDTTQYYFQPFIVKDQESIDRWGLFFAPDDITNDSIQDKDQMRDYALKQFHPNPDMSITCTMMNNERPIPGDIVHFEIKQRNYKSKLPIVGFTWYSHRRSSNNTTITLNSVEKSILDYEQSFNNAANRPTQIINPGWSKQTWTRQEVRTFGENIEKPNTDQDTNNS complement(1210841..1211686) PHAGE_Lactob_LF1: hypothetical protein; LAR_1053; phage(gi418489398) 4e-41 MSEPEIYVKVGNQPEIKLTDKITGLSYLGMDDSGSSPQVVNNYQQLAAVDGQQFISEAYDKRTMNEKFSLNFMDYEDLQLAKHKLYNLLFGSRQLIRIRHSINMAKVYFAYPMTADVAPISPGANVATFTIPFENPSGYWFSIFRSDTVKDFNGDGTGYGMNYLGNNPGDYHFNSMNFTVYNPSDVAIDPYYQHHDMKVLIRFSGSKCKITNTTNNSSLEITKSQSGVITYDGVNCYVDNNNINNDTDFGTITLERGNNNFQITECSSVDITFSFPFIYLY complement(1211701..1215540) PHAGE_Lactob_phiAT3: putative minor tail protein; LAR_1054; phage(gi48697271) 3e-132 MDKLKVENEMATRISVDTIAATKSLSAFRSSISAATNAWKANETALKNSGQYAEAAKARISGLNEVIELQKAKISELKSRQEGLNLSNKDQLETWLKLDKDISQASKQLASYEVQVNRANSTLKYQTSGLAELQTSFRRAQESSRAYANNLRANGKELKANDVEIKGLSIGLKTLSKQYDLQKKELDQLAKTQGKNSEAYRKQKVRLDETSASIGKTKSQISELKTRTDDLHASLIRKDTLGSGFFASARNKILGIKNAEELTNRETKSLRETLKTSFAGVFVSNLASNAIMAMTSNMHGLIEAGREYNKEQDTMRTVWKSLTTEAPQDGRQLINFINDLSQHSIYSAETINKMAQSFYHVDSNVKHAKQWTNDFVRLGSTMHMTNAQIAEAGEQYAKIVAGGKASQEDMNVMINRFPMFGEAIQKATGKSMKQLQELSQQGKLTADDFVKAMDYLGKKYKTGQSEAMTSYMGMSMYLKSRFSKLSGDVQKSSFKMSKSAKDALVQVTSDKSMQRYANSISKALAGVLSLLSKTIAFMSKHQTAVKVFSKTMIASFAFTKTARLVTAFYMTLGKGIAVYKGLSSAAKIAALNQKMLNLAMKSNVIILVISAIAALIIELKHLYDTNKQFRKFINGIAKFAKSGLKKVGSFFKNTFKQISKSQEQSNREQAKANKQAEKNWHNFTNSLAKNWKSYWRNRQREQRQDEKQNQQYWNNVRKSASRGWKNIETSARSGVNNINRWYNNLNNSTSRIVRNMYRQHPKTFQSMYRVIQDHTRSWHDLVSGHWDRLGQDTSQTAKDMRKNNHQIFKDMYDRLNDLTGGSLGRMLKSWQDHMSQIGDAIATGKKNAMRAMADLANGVLKPFNTLMNDIKNGLNWILDKIGASKISGDWSISVPSYATGTAGNPDGTKRSSLALVNDGPGEHFREMYRLPNGQIGMFPNKRNFLAFLPKGISILNGEASHQLAKAFNLPRYANGVGDFFSGLTDKLDNAGEFIDKVIEHPIEALNEVFKRFVHISTPIKYASDLVVNVPIYIAKQAGKWIKKQFEELADPGGSGVERWRPYVVKALAMLHLSGSLVGKVLRQIQTESGGNPKAMGGTDGLADGHAMGLMQVKPGTFAANKLPGHGNIWNGFDNLLAGLNYARKRYGDSLSFLGQGHGYANGGRIDTEQFIRIAEQNKPEYVIPTDINKRSRAYQLLGEVIARFRGEEPSVQTTRDDQSIDKDNFRSLESKLDQLHKDIQSLINLGTQQVAAIHSQGKFDPKRQDILQAQRLSMKLNSF complement(1215757..1216155) hypothetical protein; LAR_1055 N/A MEVNMTVKINTKQIGLGKPINIHATVGAVDKADEMMITLLSLDAELSKSEKNLDSSEAMIATLKKEREVNKKIFVFLQDVLKLSDKQVDMIKDRVDYQQLGSYVSYVCNRIKGVPEDTYQKTVNNKKKGPKG complement(1216205..1216915) PHAGE_Strept_Sfi21: major tail protein; LAR_1056; phage(gi9632948) 6e-18 MAGMSIKGIDFVMAGITDDKGVLITDPEKGGLGPKGIALWDGDGDGATTANITGLEEAGQQQYANNKVKRINHGVPTPQVALTMLDMPYEDGSKMVGYTDINGGRVLSNKKPHVALLIASHDFDGNWFFDAFANGEMTLPTRNHGTNNKNETDSNVAFTYQSLNPIPNNVFLNKEGSQQSFKAYNTGDSAWQGFETMLKEVFGGYSGDNPMASYIQATGTGSFANTNQSDVNKPTV complement(1217300..1217725) PHAGE_Lactob_phiAT3: putative head-tail joining protein; LAR_1057; phage(gi48697267) 8e-21 MVKVDFAASLEEFGRKAEKIAVPDHETKKKMTAAGAEVLVSKLKEVTQEKHYQPGRKTGKVKHLADSIIFENKDMGDVDNGNSLVGFEGPKDSGINHARIARFLNDGTVKMRGDHFIDNTRRDAKDEVFEAQAKVYRGQQK complement(1218037..1218405) PHAGE_Strept_YMC_2011: putative DNA packaging protein; LAR_1058; phage(gi399498724) 4e-19 MSDETPSLDKLVPRVREMLYLDDDSDDQLLNSYVKAATSFIHNAIGEDVNGFYDDSRVVSLVDIAVMSLAGTYYQNRLALSDTQTYPIDLTVNSIIGQLRGLRNSYDEESDKNETSDQPAES complement(1218425..1219609) PHAGE_Lactob_phiadh: major head protein; LAR_1059; phage(gi9633043) 2e-128 MKLMGINELNDAWIAKGQEVSDLNNKLNAAVLDDNFTKDKFAELKEQRDNAKIQRDAIKDQLDEARAQKVKAMKSEDKKPLNKKEMDIKDQFVREFKDMVTSGKTGTGNGGLTIPDDIQYAIHQLVRQFATLQNLVNVESVTTTTGTRTYEKLSDITPMTDLDDETATIPDMDDPELTLIKYAIHRYAAIQTVTNSLLKDTVENILAWLSNWVAKKVTVTRNAKIIEAMGKPAKKPTIASFDDIKDLENNTLDPAIMSSSSFVTNQSGYNVLSKVKDAQGRYMLQRDVTQPDVYRLDGKTITVVADKWLPDVAAGTHPLYFGDLKQGITLYDREHMSLLSTNIGAGAFEHDLYKVRVIDRFDVEVIDDGAWATASFKAVANQQATTPEASGKTA complement(1219590..1220324) PHAGE_Lactob_Sha1: protease subunit of ATP-dependent Clp protease; LAR_1060; phage(gi418489805) 9e-63 MMTKINVKGVIVSNDDADIYDWLGYDCVSPNQVEDVLNNSDEDIEVDIASGGGSVFAASEIYTMLKAYSGKVVVNIQGLAASAASVIAMAGDEINMSPTSQMMIHKASTISMGNADDFAHDSKMLDVMDQSIVNAYEAKTGMDRDDILQLMANETWMTAQDAVDKGFADNISAGSKTPQVVNAVSNQPILNSTAIAKIKTVLAKARDAKSKNEVETPINNKEKPTPSLKDQKLAILLGDEINGN complement(1220308..1221498) PHAGE_Lactob_Sha1: phage portal protein; LAR_1061; phage(gi418489804) 1e-134 MPLFNQKVSPGLSVTDDTDILHFLNPDNSDKYVDARTALKNSDIYSIVFQLSADLANGKLKADAPRAQGILNTPTQTSNAHSFWQSMFAQLLLGGECFAYRWRNQNGTDMTWEYLRPSQVTPFLLEDGSGLIYNINFDEPEIGVMEAVPQSDLIHVRLLSQNGGKTGISPLSALANELQIKDQSNKLTLSALGRSILAPGILSIKHGGLLSDKDKASRSRKFMKQTSDSKNGPIVLDDLEEYTPLEVKSNVAQLLNQVNWTGAQIAKVYGVSDSIINGQGDQQSSIQMMGNAYVKSLSRYAKAITGELNNKLNANITLDLRSAIDPLGDEYASTIANLQKNGTLGANQAAWLLQQVGYLPDDMPEKEQPKVQVQPVQMVSSDDKQSTEGGDNDDQD complement(1221685..1223574) PHAGE_Lactob_Sha1: phage terminase-like protein large subunit; LAR_1062; phage(gi418489802) 0.0 MKIDLTQTHDVLGAYQATDFSNIKEKYQDAGTKYCFDVLDGKYITGYQIKLACFRHLRDLQRQNAKDFPYHYDTSEVQNILKFASVCPEIKTRKPVKLMGWQQFVLAMLVGWRDSKGDKRFTRAILSVARHNGKTYLMSIVTIYSFLIEAINEAGQDFLVSSINYKQTSKLMGYIKQMLLYLMEVPPFGQLVLELGINPKTLSSQSDQIVMSKTGSRLLAVTYKSGQYDSFHFKTAIGDEFADPEVGDNSKISKITSGQLDVTNKQFIQISTAYDNPSVPFHNDEKRVQNLMEADYLRQGDAYLVLNWCQDDENEVFKPETWSKSNPLMDMPGKRDRFVLDLQTERDNNMLTGNMLGFQNKSMNIWMQQSADSFLKLDDIERAIIPRFDIRGREVYIGFDYSMFSDNTAIAFVYPYQDEKGKQKWHVEQHSFIPWNKAGSIEAKEKQDGINYRQLADEGYCTVTSHPQGLINDEQVYNWLLNYVDENHLKVIFFGYDAWGATTAIKQMDLNTDFPLESIRQRTSELKDPTKFLQKIFVEGNVSRLDDKIMEKALINAEIYEDKIGIQVDKAKATLKIDVVDAIIDALYQGMYHFEDFGIANDKSQQVDRMTAEQVKAWFENKDSGLLDN 1223810..1224247 hypothetical protein; LAR_1063 N/A MTYDIKAIKKNAEHLGNAYFDDKDKLLLINHSTLLKHNQYEVIKYEDIMYCYVDESDGVQTTNHSLGYATLGAMVGGFFGAMVGAAAGKQQRKVITGIQVQVMTTDQKEHYIDCVKLPDAKLNDIHYSTGQAVGSKVEEIIQNNL complement(1224270..1224743) PHAGE_Strept_7201: ORF21; LAR_1064; phage(gi9634648) 4e-40 MVKHAFYQQNNGHLSYSPPKYLTPIAKTCWRKVVPFLEATNRVQRIDSMLVEQYCVQYQEYRNAYDNLQKEGAQQKIYRSLQDVQTGKVIGKDFVGWKKNPAVGRLKDATQMLNTIGIQLGLSPKSRAELFKTVQSKKEEGSTAKSIQEFFSNNKKQ complement(1224888..1225424) PHAGE_Lactob_Sha1: restriction endonuclease; LAR_1065; phage(gi418489800) 4e-55 MPRYRRCRQPNCHAMVQFPNHYCPKHFEHEAEYLANRQRWARKHSEQYQHKEKQYNHHYNTVTRNRNDNRSEQYRFYRSKQWVDLRQSVLNHDHYLCQYCKAIGKLTSNSKTVDHIIPIAFDHKLMASSSNLATICNKCHRLKTKWEQGYYGTGQGMEMKNVPEISEISKIVLLMHQK complement(1225492..1225671) PHAGE_Lactob_JCL1032: hypothetical protein; LAR_1066; phage(gi418489174) 4e-11 MAELSEARRKANKKWNEKNKDKQRVYLYRSHAKKFVREIANEDDLKELRKMIDDKLNNN complement(1226331..1226789) PROPHAGE_Salmon_Ty2: transposase; LAR_1067; phage(gi29143766) 4e-42 MANKLNSLAHTKWLCKYHIVFIPKYRRKAIFNQYRRDLRDYIRLLCKYKGVEIIEGHMMPDHVHLLVSIPPKLSVSQFMGYLKGKSALMMFDRHANLKYKYGNRHFWAEGYYVSTVGLNESTIKKYIRDQEKHDIAMDKLTSVEYSDPFKGK complement(1227062..1227913) hypothetical protein; LAR_1068 N/A MIYMNKIKRLCKKYQQVIYTLFAVLVIISVVYFALHGFDSFVKWATTDVGSVADWAGSIGTILAFVAVIWQQGRQENITRAVHIEESRPRFSLTYTPKPVLKTRVLFWGNGRTAVNINEILGSRSAENYRFISIENISNNVVYDYSIILKYHSNDNARVRKDYWSSHGLFPRRSVAIVPKFMGTDKDKIGNYIYDELLVKFTTPANEVGFFISKNINNAQTDSSFGKSQYYFVRGSHVKRVTAINTDKMIDVDSSICRKLDKEFDEIIGITSLGEINENGKLS complement(1229520..1229840) hypothetical protein; LAR_1069 N/A MRLMIRYDGEVVYSESGSGIRANNRMLFNEAQVSAIKAITNGEFKRQSDFGTVYVVKDQLVDDYGVLEIIKVFEQLDDAQKYVMAHPRAALLPRKVIKHGKVKEQK complement(1230099..1230287) hypothetical protein; LAR_1070 N/A MHFYLVDDDNSSKVIVAHSKDEAWRAASKRDFGDPVDPEAFYEITMLAPNHYKKAQIIVEER complement(1230287..1230673) hypothetical protein; LAR_1071 N/A MLPYVWSTTERGGKIMTKEEIFNDFIKKVKWDNFQIINVCRSNRDNVQSFSFEITDKQTATNIELANKLSKENAEVAGRMNRLDEFMHTDEYNRLSDKEQRLMIIQYNAMQVYADVLLQRIDEIKERL complement(1231463..1231741) hypothetical protein; LAR_1072 N/A MITIDLDNKFAIVSDGEALNIVQKDGKMRKNGTPSGQKWWFNTYGQAIKFYEKKVDAGRPIHSLRELAKQIDSGYKRIEIMVDQKLKEAGIE complement(1232507..1233391) PHAGE_Bacill_phBC6A52: replication protein; LAR_1073; phage(gi31415828) 1e-28 MQVKSRYRNMARVKKIKIKGFTIIDNDIINDPRMHLKALGLFAYMWSKPDDWQFYISEIATHFKDGESAVSSAMKELMELGYLKRTQNRKDGKFSTYDYVLQEIPKPENHSSVPKGDLPKPEKSKSEKPIPENQGLLITDNTNTDLNNTNKVLSDAQHSVKDVFELWQNNWGFPNGIAQQDLTEWTNKYGADLVLHVITYALRRNIASKGADRYLAKTFERYDQQSIKTVEQAKKSEQQHEQQMSREYQQKSGSRKRQPINEPMPEWFKKQQEEQPNKQHYERIDDSGDPMPHD complement(1233369..1234265) PHAGE_Lactob_LF1: hypothetical protein; LAR_1074; phage(gi418489429) 2e-107 MKNQVKKLQTDKQNSSTREQSSQPMKLTADNYYSHETDWQYMSVSLFKDFEKCEARALAKLKEDWQPVSSPVPLLVGNYVHSYFESAKSHQDFIEENKKALMTHPTKTNPNGHLRAEFKGANSMIQTLQADDMFNYFYAPGDKEVIVTGEIDGYLWKGKIDSLVLDKGYFCDLKTVDDIHKGHWNTYEHRYVPFIQDREYDLQMAVYRELIKQTFGKKCQPLIFAISKQTPPDKMAIDFNGVDDDYQMQADLDKVKELQPHFWKVMTGEEEPVHCGKCDYCRETKMLSGFIHASEIEV complement(1234177..1235166) PHAGE_Lactob_LF1: RecT protein; LAR_1075; phage(gi418489428) 2e-69 MNNQVAINQELQDKANSILSSVNINQTGALAVGQLRTVIDARINKQQNQGLDLPANYSVPNALTQALLRLQAVKTKGKTPVLQACTPNSIIQSLMDMVVQGLSPAKDQCYFIAYGNELQLRRSYFGTTAALLRLENITDVDAQAIYEGDQVNTSIDRHGHLVLDTENTHLDWTNQDNELIGAYAIITTADGVDHLTIMTKKQIKVSWNQSKTHDVQNKFGSEMAKRTVLNRAAKMFINTSDDSDHLLTGAINDTTSNEYDDERRDVTPVEDEKQSTDELLEGFQKSQEAKAKGVSNSGNSNEESSEEIADGQTELFNERTIKPADEADS 1235663..1236169 hypothetical protein; LAR_1076 N/A MQDKIVVSSFWATVLVIGTLLSPIVTIILNRIFDLVAKRLNNQHERYESYNSRRRELLEQYLVGLVEAERAETPEERKNLKLIEVSYLLIPYLPNYMQETFQRYALEAANRKHDAKSNADFQTVTIFIKELLDPRGRRWIYSTKHKKWIWKRPNKALSCFRQWRSKWK complement(1236739..1237512) PHAGE_Lactob_Lj928: putative antirepressor; LAR_1077; phage(gi41179298) 1e-80 MNEPQLFNFHGQQVRTMTLNDEPYFIGRDLTAILQYSNGPKAIRDHVDADDKLTERIVLAGQHREVTLINESGLYSLILGSKLPTAKEFKHWVTSEVLPAIRKHGAYMTPQTIEKALLNPDTIINLATQLKREQEQRKQLQAENEQMKPKALFADAVSTSNSSILIGQLAKILRQNGVNIGQNRLFAWMRKNGYLGTRGSNRNVPTQRSMELGLFKTKETVINHSDGHTTVNITTKVTGKGQQYFINKFLNAPVIEA complement(1237561..1237764) PHAGE_Lactob_Lj965: putative cro repressor; LAR_1078; phage(gi41179225) 3e-15 MPGTINLNLIKQLRSKKGFTYGDMASALGLKEPEKYYRREQGKYRFQATELPPLAKKLGIPIEKIFK 1237943..1238380 PHAGE_Geobac_GBSV1: immunity repressor protein; LAR_1079; phage(gi115334658) 7e-27 MNDDILREKIIKLREERGWSQAELARRINMNNTALNKVEKGTRKLSSSELSELASAFNVTTDYLLGRTPTPQFTRRDERDVQKTLEEMFNGLSDKNALSYMKNGDQEIDEEDAELLRASLENAIRMSKILAKKKFTPKKYRKNDD 1238962..1239471 PHAGE_Lactob_Lj965: putative superinfection immunity protein; LAR_1080; phage(gi41179219) 3e-51 MAKKITDKDGNVYVQKKAWYKRWWVWVIIVLVLLFGIGSMGSDDNSTSSSSDAATESSTKSSSSSTHATSQQTAALHSAETYANDMNMSKAAILDQLTSDAGDKFAQSDAQYAVDHVKADWNKNALKSAESYQKDQDMSTEEIRDQLTSPDGDQFTQEQADYAINHLSK 1239631..1239642 attR N/A ATTATGAATAAA 1239954..1241084 PHAGE_Lactob_JCL1032: integrase; LAR_1081; phage(gi418489141) 8e-52 MWMQERNGKFRFFEQYKDPLTNKTKIISITMKDHKKSTAKQAQIILDNRISKALSKVGIGKIIHGITLKQLLGEYTKYEKPRIRRSTYYSHQTMVNTLLDIFGNDALVEKFTPLIITEKLESLMYGDRELSSGYVSRYKYYLHKLFDYAVKHSYTKDNPVDNVKIDYKAPANGQQIKDKFLEADELKAVLKYLYNNTRIYGELCEWLYLTGLRFGEAAALSFDDVYQKDNHWFVDITGTLEYKRIKIKEQKKSDAPKTSSSVRSVVLPKKAVQIYLDLKKKSNGKGFIFATENGTPIQTASVNTVLRSAKKKLKLNKPLSTHVFRHTHISKMAELGIPLYVIQQRVGHSSSKITSQIYLHVTQKAIEKEASKLDEL