gi|188591327|ref|NC_010529.1| Cupriavidus taiwanensis plasmid pRALTA, complete sequence. [asmbl_id: NC_010529].557200, gc%: 59.65% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 117493..117504 attL N/A AGACGCCCGAAA 119603..119965 PHAGE_Stx2_c_1717: truncated transposase; pRALTA_0136; phage(gi209447151) 9e-10 MEIKARGRRRGSKNYSKEFRTQVVAETLDPASSLAEVARSHGLNANLVSKWRRDYERAATSASEPSELFLPVQIASPPRPEPIGSTGLVIECRGMRVSFEGKPEPDVLQLVLASLLGVGS 119965..120312 PHAGE_Stx2_c_1717: transposase; pRALTA_0137; phage(gi209447152) 4e-41 MPGLPAGTRVWLAAGVTDMRSGFNSLAAKVQTVLERDPFSGHVFVFRGRRGDLVKVLWWSGDGMCLLMKRLERGRFVWPRADGGVVSLSQAQLSMLLEGIDWRQPVRTAEPISAL 120342..121661 PHAGE_Stx2_c_1717: transposase; pRALTA_0138; phage(gi209447153) 2e-116 MTTANAYPDDIEALKALLLERDARIGHLQDVVESQKAATATDKAEIEHLKLLIAKLRRMQFGRRSEKLDRQIEQLELRLEELEADEGAAPIEIHRTPRTAPEQVQRKPLPEHLPREFQTHWPESRDTCTACGAPMKQLGEDVSEQLEYVPASFRVIRHVRPKLACSCCDHIAQAAAPSRPIERGMAGPGLLAHVLVAKFADHLPLYRQSVIYAREGVELDRSLLAKWVGHSAALLQPLVDTLRRHVMAATKLHADDTPVPVLAPGNGKTKTGRLWVYVRDDRTSGDATPPAVWFAYTPDRKGIHPQQHLESFNGTLQADAYGGYQAIYETGRVAEAACWAHARRQFYELYAARPNSLNTEALERIGALYKIEEQIRGKPPDVRQAYRQAQARPLLDQLHAWLRATLETLSRKSDTSRAILYGVVVLFVQNLTVSSRFSL complement(121726..122718) PHAGE_Iodoba_phiPLPE: gp77 putative tail-fiber protein; pRALTA_0139; phage(gi197085691) 1e-07 MARAGLSRLDVKRARDSLMAQGQHPSIDAIRIALGNTGSKTTIHRYLKELEEEEGGALQRAGSTSDAILDLVGRLAARLHEEAQAVVDQQVAAATAQRQQVRAEADKLSADLVALRAELAQAHATVAEVRAAHSDTQTALQQRALEAERLAQQVQDLTERLAEHEGFRRSLEEKLQHAHQALEHFRNASKEQRDQEARRHEQQVQQLQAETRQANQALIVKQGEITQLNKDGARLVAEIAASAKRSRGLETQAEQAHAGLNQARVDQARAEAERDALRSAVQQQADELTAERAARERLAGELAKVTGRLDAQQQLLADYRTQLGVAGPAA 123135..124493 PHAGE_Entero_P1: Cre; pRALTA_0140; phage(gi46401628) 1e-08 MVMEARQARQYASAPSLFAPLGHARRRPIPGSRHPRQHAAKLPGSHSSFRGRMGWFSAASADSIARYLAEHAQTLSINTLRQRLAAIAQWHVSQGFPDPNRAPHVRKVLKGIQALHPAQERRAKPLQLAQFEQLVVWLDAQIAAASMTGNDHHLQVLARNKALVLIGFWRGFRSDELSRLQIEHITVEPGRGMTIFLPHTKTDRNHAGTTHKAPALSRLCPVAAYVAWLAASGLAAGPVFRRIDRWGRIAEAGLQASSVVPLLRKLFQDAGLLQADRYSSHSLRRGFATWANANQWDLKMLMEYVGWKDVRSAMRYIDAADPFAQHRIEAALAPPPATLPSAPPPERRPTVPPKPVPETRLTVDLYIERNSKFVRGKSKARRWIEQFCLSQYQMRVFEQRRPRYEIVMPFTAGPELEKAIEVLLADMHENADLCNCFIEVTLHDPLTDTHWS complement(124526..127450) PROPHAGE_Xantho_33913: Tn5041 transposase; pRALTA_0141; phage(gi21231545) 1e-14 MPGLEFRYVGKDSLPSRLSEFDVEYYFALTDSDVAAINQKFRRAGRAGAAIQLAFLRASGRTLDQLNTLPRQLLRYVGEKLGLPTPTIASLRTIYQRYPTLYEHQVWACQYLGLTRIDDDHWRGLGAWMRQDAAESLSLEELIQHAHYWLYERRILIPSTRALLSLARSIWAGIERDLLLSIEAVVPLAQIAGAEAAVFAQHATAGTTVLEWLKTPPARHSPSTMNETLAKIRFLKSLGAHTWAFDAIPIEKQRACGQRIQARRPAKVRELKTSTRTIELVFFLRVTLLELTDAMLYQTGRRVSDLVRQAYNKTTTKQARSASEYRQQMVEIKALVDDTRRSAEERLADIGKLLEGLSAKPPASHAASVRETLTEDHHRIRNLVTSLRELEFASNSTDPALRQLEFIGSLHDQGATELPPDCNVSVGASWRDLVDGEDRKRALRAMEACAITGLRKGLRRGTVWISHSLSFRERDQLLIPPAQWDSERDRYLSTLDLPNQADTYLNPLMDHLKAGLAALDEARAAGHVTIDTNGVLHLSPLEAAESDGIPTRTRDLLFKDIGSAQFADMILEMDARTNFSEVLLARNGDAHELITLYAALLAHGTELDAKGVAAMIPKLDPAHVSTAMRALEMPGRLRRANERVVEFQRTHPITELWGTGQQASSDSMSLDTSRHLFYARADPRRRTHAVGIYTHVLDQHGIVYNQPMVLNERQAGVAIEGVMRHNETRSDGGLLRLAVDTHGYTSVGMAVSKLLGFDLCPWLRNLSERKLYLPRGLQVTDGLSAAVSPEISLKAIRDGWDGLLRLIASIHSGRVSAIVALQRFGSAAQGDPIHRAADHLGKMLRTLFLCDFFSNIEFRRELRTLLNRGESVHQLQRAIYSSKVHHDRGRRQDEMIAISGSLTLLTNLVIAWNTQRMQTTADAWRRKGQRIEDDWLRRMGPAHFAHVNFRGIMSFPIHLYQDSLLEVAPQRRAV 127940..128305 hypothetical protein; pRALTA_0143 N/A MAKPGVNQHEQRISMEIVVDAYTEEECAMAWYCHLEDSLSFPFEARVHQAMAASPLRAGERVSVIVLAHDQLCRVAIFVRAQHNRRELVVPLAQLVPVRADQSTRLAVSDWHYWCDQGYSF 128489..129256 PHAGE_Burkho_KS14: gp8; pRALTA_0144; phage(gi327198277) 9e-32 MLSTMQLSLFPHATIPRPDASEPVLLLMACSSTKLDRDARAIDLYRGVMYESYRAHVRSDAAPRVLILSARHGFLQPDTKIAPYDEPMTRQRADQMVADLSRYLRPAAWPTRIGKVMLAGGKEYRRVMHAALARQYGPTLPALQETSGGIGMQRSQLGAFLDGLTSVFRHRIGQHANGTPLYRGYGWIEAGAIATLLYRAAPALPSRQARVLSVFQGPGGPTADVEVEEFVRGRAKICPRWVSVRDLHPSTEVLA 129253..129585 hypothetical protein; pRALTA_0145 N/A MSDFDRQLHRDAVELCQTGPATPDKLVALAHAGLKAWAKVGNLQFPPERRYALLQQIMRYCAWECLLACCFTQADRLERIAEMLDAAYPRYACTRARLDARRNRYGRPRF 129906..130853 integrase/recombinase; pRALTA_0147 N/A MGQIQYITACMTQMDSLWLSNPTQAYGDWQVREAAGADGRPFSARSIVQHQAMFEHFRRHLLARGTTIASFGTADVDAFWQTHNGRTYSQATRMRYVKLLDRLCRHLVFTGVRQDNPAAALLSAERWPDQEPTPQFLTEAVDARLQAYLQSPPDDLASLRSQAIVAAFLGTGITAAEARAARCADLWPDATPPYLVVRAHGLRDARTVHLASFAVPPLRAWSTRRAALAIEGELLFTLTPEGLPITDMSFGRIVSEILNAIGATNVETSPRTLRNTFCRRQLLAGQPRDEVSQMLGLASNRTCDRIFATIHQPTI 144412..144423 attR N/A AGACGCCCGAAA #### region 2 #### 486198..486209 attL N/A GCTGGCTCGACG complement(495206..495307) putative phage integrase fragment; pRALTA_0600 N/A MPWEQIRLPHEIDGSRGAFRPLRQMCTLDANND complement(495276..495587) putative phage integrase fragment; pRALTA_0601 N/A MLTVTWVDWCRPGHLHTKAYAPRERFSMQDTMISPDFPDAAALAALRAWYAGASSRQAVARAPETLRSLPLPEPQISDSAGARPGHGGTARSGRAVGADPAAA complement(495587..496927) PROPHAGE_Escher_MG1655: IS4 transposase; pRALTA_0602; phage(gi16132099) 2e-07 MTRFERPPPCLRWLFSASRAAANRGSLLDLRLALMPLTDLFASLTEYLHTKVFHDLARHPERPSAFTRQRKLTLPTLIAFMLGNLRMGVQAELDQFFAALARQNILRRCVSEQAFAQARSKLSGDVFAHLNDWLLRQVSDHLPRWHGFRLVAADASHLRFAIRHSHLPRAATRDQLAFGLYLPGAEIMLAASLHSVHENERQILFEHLDRLQSDDLLLLDRGYPARWLVAVLNQRKIPFCMRADGSGFAAVRHFVRSGRDEAIVTLPAPARNDARDYECAATPQTVRLIRQISPAGKVRVLITNLLDMHHYPAATFRDLYHQRWRLEEAFKRLKHRMALEHLSGLSQLAARQDFGAKILCDNLHALCCLTAAQEHDIDSDHRINRTYAITALKPVLPAVLLGLRWARAALNETLALIATRIHRVRPDRAKPRPPRQKPHHAAYKAC complement(497975..499075) PHAGE_Burkho_KS5: ISBmu23 transposase; pRALTA_0607; phage(gi327198044) 2e-06 MRGADTFTESLFTMRRLEDFVPQSHPLRSIRTMANQALVKMDRLFAQMYEADIKGGRPSIAPEKLLRAMLLQVLYSIRSERQLMEQTQYNLLFRWFIGLSMDDSVWVPTVFTKNRERLIKHDAVIQFFNEVLAIAQKKNWLSGEHFSVDGTLIQAWAGHKSFVRKDGDDQDDDAGGSFKGRKRSNETHESKTDPDAKLYRKGKTSSELRYMGHTLSDNRHGLVVSAMVTKADGHAEREAAKVMLNDARQVIEDLNVEVTVGADKGYDAHEFIEACLEMKVTPHVAQNTSGRRSAVPDAIASSAGYAVSQQKRKLIEQGFGWVKTVGRMRQVMVRGLKKVDQMFVLSMAAYHLVRMRSLGQIRSQLQ 499221..499478 hypothetical protein; pRALTA_0608 N/A MKVVEHEPAPASVGETAITRSTLPAMVGILLGWKLVVPRACLVVQRVESVQANRCWHRRNCRRLISAYAGVEIDWDWTMRGENIV 499718..500272 PROPHAGE_Escher_CFT073: transposase; pRALTA_0611; phage(gi26248360) 4e-36 MADLPPMLTQEQAVEIRVLAKRGAGVREIARQTGLSRNTVRRYLGDEHAGRYRPRELRATKLAPHHGYLLERIEAARPRWIPATVLLRELRERGYDGGVSQLEVFLAPHKRAEPEPLVRFETAPGKQMQADFTVIRRGREPLLALVATLGYSRASFVRFTAGEDTATLCACLEEALAFFGGVPE 500456..500467 attL N/A CGAATGCGGCTG complement(501395..502744) PHAGE_Prochl_P_SSP3: integrase; pRALTA_0614; phage(gi472343224) 4e-06 MKCDAIERHVHHLGLRSRDTAKVYRCVLRGFQRFVRQRGDAAVSTSTMQGWLLERARHSPVHMVLHRACIVDRFLDYLHSEGMISHNPLAELRSCYGQRYGTPIARALLAAEPLQALESLRPPARFASFLGEMLREHVELMRAVGYRYETQSGWLLRFDRFLQGRPELPGRPPAVLLQQWAAQGRTLNHAWECQQAGRALLRAWRRVDPSVALPPPDRRLKHRIEWERRRPYIYTPQELQLLFDTARAFPSPRAPLRPLALYTMLVLACCAGLRLGELARLDLGNFDLSTGMLEVRETKLFKSRSLPLSDSVVAALREYLDARRRAGAPQDGDSGLFWHQQAAGRYSRVMIEKLLVAVLRRAGLKPEQGRCGPRIHDLRHVFVVYRMLSWYRQGINPQARLPYLATYLGHKDINSTLVYLTVTQELLQLASERFRHLVLHQVHIPGRAS complement(502760..503059) integrase fragment; pRALTA_0615 N/A MPESSVTFTGIRTNGSSLYTSLRRRLDAAGVQTNGKRGPHAFRHARAISLLRGGVPPKLIEDVLGHRSSSSVLPYLKLAVDELRDVSLEISELLTDGAQ complement(503193..503960) PHAGE_Staphy_phi5967PVL: hypothetical protein; pRALTA_0616; phage(gi431810260) 3e-07 MMTHTTLAQLRSLKLDGFAAALEEQLAQPGASALAFEERLALLIDRELLWRNDRKLARLLQRARLKYPHATIEDLDARPGRGIDRKQVTSLALSDWITTGHTVLIGGPTGVGKTWLACALAQYACRRGHSVAYLRVPRLAEELRILHGSGGFGKWLLQMAKTDLIVLDDWAVAPLDAVTRNDLLELIDDRGSSRGLLITSQLPVEHWHGWIGDSTIADAILDRLMHRIHRITLAGDSLRKSAQKTSTTSSGSHTA 504498..504686 hypothetical protein; pRALTA_0617 N/A MLSKLENGKGVNLAHALRVMDGLGLTMLVVPRAHAALLEQAAAHAAKMDKNAARERKAGVEE 504835..504846 attR N/A CGAATGCGGCTG complement(505383..506945) hypothetical protein; pRALTA_0620 N/A MSTEWIGYKWLAEHYQITPVQEFQITSEIGAARRSVVTEGKTLEIYPAGSRQEPTLQAHLTYAIRQEGVHLEFLARLFDVLPQGELAAWLNSERTGQYARRVGFLYEWLTGRQIAGVGAVTGGNYVDAIDSEAYFAATIPTRNQRWRVRDNLPGNRDFCPLIRRTPEVKAAQDYDCAARLDELNAEFGDNVLMRSAVWLTIKESKSSFAIEHEQDQLDRIRRFAAVMERRIGEYPALLSPDTLAELQREIVSERSTISRFGLRASPVFVGETHRFEQIVHYVAPHWDRLRDLLHGLEVFLERTAGQSSVIRAGAAAFAFVFIHPLADGNGRIHRFIINDVLRRDGAVPRPFILPISAVITEKPQNIARYDHILECFSKPLMRRYGNLCEFAPSRTLYPDGIQSNFEFAGYDAALPAWRYPDLTVQVEYMADIIDKTIRQEMRTEAGILQEWTTARRMVKDIIDGPDADIDRIIRSIRDNQGAVSNKLRKEFPILENDQIVADLVDSLKTAFKTFDSGSSR complement(507210..508460) integrase/recombinase; pRALTA_0621 N/A MELLPLPPSDGPAAPLPTALPIPLERLRLPPALSGAAGSNRAPDRATGIAAGDDLAAVTAWLARYADSAATLTAYRREVERLILWSVLQLGKPLSSLTHEDLLAYERFLADPQPAARWVLAGSKKLARSHPDWRPFAGPLAPRSIRQALVILNALFAWLTEASYLAGNPLALARRRRAPTRPRIKRYLSHELWDVVKATIEAMPGTADTATERERLHAARCRWLLTVLYLGGLRAAEVTGTTMGAFFCRRDTQGIERWWLEVTGKGNKTRLVPATDELIAELARYRRAHGLAPTPQPGETRPLLLPVIGQENRERGLSRSALHLILKEVFGLAAASLRARGPEWAAQADVLASASAHWLRHTAGSHMTDRQVDLRYVRDNFGHASISTTSGYLHSEDDARHEATQVRHRIGWTSKT complement(508561..508938) putative toxin of toxin-antitoxin stability system, PIN domain; pRALTA_0622 N/A MRILLDTHVFLWAVTNDPKLSQSAQRMILEAEEVFISAASLWEISIKAGLDKIEVDVDELIAEIPAAGFRELPVTNTHAAAVRHLPNHHRDPFDRLLVAQAITEPLRLLSADEHVWKYSDLVIRV complement(508938..509174) putative Antitoxin of toxin-antitoxin system, phd type; pRALTA_0623 N/A MQTVNIHEAKTHLSRLIEEVAAGDEVVIAKAGKPVVRIVPFAKPKPPRRLGGLLGKIRTADDFDAPLPDDLLAAFEGR 509360..510427 PHAGE_Helico_2: hypothetical protein; pRALTA_0624; phage(gi370703038) 5e-14 MAAADLDLTDTALQADLTELRSRFPETRALYREVCGLLFFRYGVTPTANKLYSLVRKGSMGTPAEVLQAFWQELRGRTRVTIDHPDLPDPLKQIAAEAVQTIWQSANEAATAELATLRAEARDAANAAESERDAARAETAVAREDALALSAQLGEARQAHDAVQAELAAERQAHAATRARWEAGRGELEAAGRQLAELRTQFSTELERAREAVTLAQERAEASERRSLRELDQERTARQKSERTAEDLRGELAVARSEARDAAVAQAEGRTKLEAQAAALAERLAATEQAQRRAERAEAEAALARQLLATLRVAPREREGGRRRKAASSAATVPEEQGDGQEGRPEFAKFSPNMA complement(510730..511452) Mg(2+) transport ATPase protein C; pRALTA_0626 N/A MTIEAIQNINLDSLLDTSISVAAAFVLGAIIGYERQYRQRTAGLRTNVLVAVGAAIFVDMANRLAGHDGAVRVVAYVVSGIGFLGAGVIMREEGNVRGLNTAATLWGSAAIGACAGADLLPEATVGCLFVLAANTLLRPVVDRINRQPIDTPAVEVTNTVYVIAPRERQKEAMRLLDEALEDSNHPTRDLVVHAFGTDDVEIEAVLMATSVDGEKLDHVVARLAASSAVSQAFWSPSTTE complement(511517..512815) PHAGE_Plankt_PaV_LD: ABC transporter; pRALTA_0627; phage(gi371496158) 4e-27 MQNEILTPTQNILTVRDLSHGYGRDQGKRLVLDGVNLKLREGEIVGLLGRSGSGKSTLLRMIAGLISPTSGQLDYCGSPIKGPAEGVAMVFQTFALFPWLTVLDNVEAGLEALGVPPAERRERALAAIDLIGLDGFENAFPRELSGGMRQRVGFARALVVNPTLLLMDEPFSALDVLTAETLRTDLLDLWTERMLPIKSMLIVTHNIEEAVFMCDRILLLSSNPGSVVAEFQVPFKHRRDRLEPAFRELVDEIYAKMTARPTKGAAPRNGLDIGSPLQPVSTNLMAGLIETVAAEPYRGQADLPEIAATMHLEVDDLFPVAEILGHLGFAELREGDIVLTVAGLLFNEHGTQERKALFAEHLVRRVPMAGYIRTVLAERKDQQAPRVRFEQKLEDFLSDELAKQTLEAIIEWGRYAEIFSCDDHTERFSLES complement(512829..514565) putative Binding-protein-dependent transporter, inner membrane component; pRALTA_0628 N/A MANEFMPQLPGTARRLLPNRWDFIALPLIIGLLVVAASGIRETLAPLAGPSAEAISLDPAMLPEYALRTTLRMLAALAASLLFTFTYGTLAAKSRRAEKVLVPMLDILQSVPVLGYISFTVVFFLALFPGRMLGAELAAIFAIFTSQAWNMTFSFYQSLRTLPPDLIEVSNSMRLTPWQKFWKLEVPFAMPGLIWNMMMSMSGGWFFVVASEAITVGDKSITLPGVGAFLATAIADSNMAAVGWVILAMIAVIVLYDQFLFRPMVAWADRFRLESTSAQTAPQSWVLNLVHRTHLIQSLLRTFGRLLRKLARARFAVQLPAASGPQRAGLARVVDVVWSLLVAVLAGYLLWRTVSYVHTEAGLDEVVKVIGLGLLTLLRVLVLIVLTSLIWVPVGVMIGLRPRLAEKIQPLAQFLAAFPANLLFPVFVFGIVHFHLNPDIWLSPLIVLGVQWYILFNVIAGATAFPNDFREAATNFRIRGWQWWRQIMLPGIFPYYVTGAITASGGAWNASIVSEAVSWGSTSLSAHGLGAYIAQSTAAGDYPKIVLGIAVMSIMVVCFNRFLWRPLYAIAESKLRMN complement(514772..516160) putative porin, OprB partial C-trem domain; pRALTA_0630 N/A MKGTRWSARTLAALTVVLLAIGLAPAHAQNAGESQPASGAAPGNATADPMEDRFAFHGQATYIWQRKPSFGAAYSGEHSLGTERAKSYSFTSTLDLGLRLWQGAEFHFNPEVSQGVPFSGLHGLGGLTNGELAKSSGTNPTFYRARAFVRQTWGLGGGEEKLDADFNQFARTVDKQRVVLTAGNFGVLDVFDLNPYGSDPRTQFMNWSSLTHGSFDYPADARGYNWGVSLEYVGDGWSARFGHFLQPLESNGLKLDTRMFEHYGDILELEKRYTLAGRPGAARLLLWRNKAKMGKFSDAIAFGQANNVTPDVADVRAEHAKVGVGITLLQEVNDSLGVFFRANMSDDKTETYAFTEIGKQIAGGGTLKGTSWGRPNDELGVAMAVNMLRSPHRDYLAAGGLGAFLGDGALRYGPEQVLEIYYSLALLKYFSVSPNFQYIRNPGYNRDRGPATFYGVRFHAEF 516462..516791 hypothetical protein; pRALTA_0631 N/A MGRTLSDDRAQHTKMFHGTAMDFRRPIEATAVFLRHVVFVGGTVKMRLTRRRTKSVTDSLDAGAYATPAETPARPWLGRSIRGRWKGPSASQMTGAISAYCGKAGVVDG complement(516758..517930) PHAGE_Mycoba_BPs: integrase; pRALTA_0632; phage(gi189043119) 2e-08 MNLPAPAHESVLPIVLPSALDGRDGTNRARAANRQVTADTDLEAVRLWLAEYASSPHTLRSYRKEVVRLLVWATRTLGKPMSSLTREDFLLYEQFLAAPTADWTDPALPRRGGARRLFDGPLSERSRRQALGILSGLLDYLVAAGYLAGNPLALRRSRSTRGSRARRVERYLDHALWQVVLASMEGWPQGTPRECQHYERSRWVMRFLYHTALRASEAARARAADFVQRRGRWWLYVVGKGGAEGEVPVSDALMAEFARYRAFHGLPPMPAPGELSPAILSVAGDAQRHLTPTAVYLIAKEVFRRAAAVLEASDPAGAVTLTRASTHWLRHSAASHQADAGTDIRFIQKNLRHASIETTGIYLHAEDDRRHAHTVGEQQCQPSTTPALPQ 518095..519042 PHAGE_Helico_2: hypothetical protein; pRALTA_0633; phage(gi370703038) 4e-12 MSRISDTRLRTREAAARLVAAGRHPHELTVDLIYAEIRQGSRTTINDELKLWKDEQARNDALSAALPPAVANAMLSVWALAVAQGEQVFAQRSGEFEAEAAAATTRAESLQVANAGLQAEVQTLRTQVDDLQARLATALADHARGQTQLDAAIRQAEAAVAERDAVRAQSDQALHEAQSTHARELEAVRAARAEHEAALRAEVDQATARLEGVQKLVMLQTDEAREAQRRAEAAVSKTRQRNEQLVADGQRLSADAAEQRRLAERHEKQLAGVMEETRELRRERDSLTQQVALLQGQLKGRDESAPARTARRRAS 523141..523152 attR N/A GCTGGCTCGACG #### region 3 #### 538003..540927 PROPHAGE_Xantho_33913: Tn5041 transposase; pRALTA_0655; phage(gi21231545) 1e-14 MPGLEFRYVGKDSLPSRLSEFDVEYYFALTDSDVAAINQKFRRAGRAGAAIQLAFLRASGRTLDQLNTLPRQLLRYVGEKLGLPTPTIASLRTIYQRYPTLYEHQVWACQYLGLTRIDDDHWRGLGAWMRQDAAESLSLEELIQHAHYWLYERRILIPSTRALLSLARSIWAGIERDLLLSIEAVVPLAQIAGAEAAVFAQHATAGTTVLEWLKTPPARHSPSTMNETLAKIRFLKSLGAHTWAFDAIPIEKQRACGQRIQARRPAKVRELKTSTRTIELVFFLRVTLLELTDAMLYQTGRRVSDLVRQAYNKTTTKQARSASEYRQQMVEIKALVDDTRRSAEERLADIGKLLEGLSAKPPASHAASVRETLTEDHHRIRNLVTSLRELEFASNSTDPALRQLEFIGSLHDQGATELPPDCNVSVGASWRDLVDGEDRKRALRAMEACAITGLRKGLRRGTVWISHSLSFRERDQLLIPPAQWDSERDRYLSTLDLPNQADTYLNPLMDHLKAGLAALDEARAAGHVTIDTNGVLHLSPLEAAESDGIPTRTRDLLFKDIGSAQFADMILEMDARTNFSEVLLARNGDAHELITLYAALLAHGTELDAKGVAAMIPKLDPAHVSTAMRALEMPGRLRRANERVVEFQRTHPITELWGTGQQASSDSMSLDTSRHLFYARADPRRRTHAVGIYTHVLDQHGIVYNQPMVLNERQAGVAIEGVMRHNETRSDGGLLRLAVDTHGYTSVGMAVSKLLGFDLCPWLRNLSERKLYLPRGLQVTDGLSAAVSPEISLKAIRDGWDGLLRLIASIHSGRVSAIVALQRFGSAAQGDPIHRAADHLGKMLRTLFLCDFFSNIEFRRELRTLLNRGESVHQLQRAIYSSKVHHDRGRRQDEMIAISGSLTLLTNLVIAWNTQRMQTTADAWRRKGQRIEDDWLRRMGPAHFAHVNFRGIMSFPIHLYQDSLLEVAPQRRAV 539792..539803 attL N/A ACGCCGCGCTGC complement(540960..542318) PHAGE_Entero_P1: Cre; pRALTA_0656; phage(gi46401628) 1e-08 MVMEARQARQYASAPSLFAPLGHARRRPIPGSRHPRQHAAKLPGSHSSFRGRMGWFSAASADSIARYLAEHAQTLSINTLRQRLAAIAQWHVSQGFPDPNRAPHVRKVLKGIQALHPAQERRAKPLQLAQFEQLVVWLDAQIAAASMTGNDHHLQVLARNKALVLIGFWRGFRSDELSRLQIEHITVEPGRGMTIFLPHTKTDRNHAGTTHKAPALSRLCPVAAYVAWLAASGLAAGPVFRRIDRWGRIAEAGLQASSVVPLLRKLFQDAGLLQADRYSSHSLRRGFATWANANQWDLKMLMEYVGWKDVRSAMRYIDAADPFAQHRIEAALAPPPATLPSAPPPERRPTVPPKPVPETRLTVDLYIERNSKFVRGKSKARRWIEQFCLSQYQMRVFEQRRPRYEIVMPFTAGPELEKAIEVLLADMHENADLCNCFIEVTLHDPLTDTHWS 542735..543727 PHAGE_Xantho_CP2: hypothetical protein; pRALTA_0657; phage(gi448245209) 8e-08 MARAGLSRLDVKRARDSLMAQGQHPSIDAIRIALGNTGSKTTIHRYLKELEEEEGGALQRAGSTSDAILDLVGRLAARLHEEAQAVVDQQVAAATAQRQQVRAEADKLSADLVALRAELAQAHATVAEVRAAHSDTQTALQQRALEAERLAQQVQDLTERLAEHEGFRRSLEEKLQHAHQALEHFRNASKEQRDQEARRHEQQVQQLQAETRQANQALIVKQGEITQLNKDGARLVAEIAASAKRSRGLETQAEQAHAGLNQARVDQARAEAERDALRSAVQQQADELTAERAARERLAGELAKVTGRLDAQQQLLADYRTQLGVAGPAA 543825..544583 PHAGE_Helico_2: hypothetical protein; pRALTA_0658; phage(gi370703038) 1e-14 MHEKDDYPVQAELAAERQAHAATQARLEAGRTELEAGRRQLDALRTQFSTELERAREAVTLAQERAEASERRSLRELDQERTARQKSERTAEDLRAELAAARSEARDVAVAQAESRAKLEAQAAALADRLAEAEQAQRQAAGDLDAMQAELAAAQRRAERAEAEAALARQLLATLRVAPRERDGGGGGGRRRKGGRSAATAPEAQGDGQGDAQQDELGEAQGEERGDAPGAAPPNHQDEGNDSSDGSDDSKD 544708..545955 PHAGE_Equid__4: large tegument protein; pRALTA_0659; phage(gi9629749) 4e-14 MKENKLAPEQEVEPRVASNATDGLGQMELPIAEAMRDADPAMGEASGAGVGRGSVDTQAQRLDFWSTSRDSGPTATVSYRRRRSYAPPDASTEDVAPEASREAAASAALTESDAPEAPMEAMSSAATTEAVAEAPVEVLATDEPMEAAAQDELTETAAPVAPLDAPAPEAAPEETRAPKRGQKPKALTETAAPEAAPEETRAPKRARKPKALTETAAPAAAPEETRAPQRARKPKALAETAAPEAAPAERRAPKRARKPKTLAEVAGPEVTTQETPSRKRGPKQITLPGAPTQKPQTRKSRQEQKTPTATQSPSQSSLLAQLASVNAQLEQLRATEVPKVVEEIRQWMQEYDLSIEDIAGKPSVAPAARAAPTKTKAAPPPRYRNPKTGQTWSGRGRAPAWIGKKRERFLIDLLS 546103..546393 hypothetical protein; pRALTA_0660 N/A MATTAVTAAMTAKTERADAIRWIQAQMDDYGLTLEELDAAGCFAPPPPPPAAPPPPVVCYRNAEGLTWDGQGEMPSWLKRAVNAGQSVEFYRVGSL 546443..546981 tRNA N/A GACCGTTGGGTGCTGCAAGGTTCCCGATAATGGTTGTGAACCTTCTTCTTGAAGGCCTTCTGGACGGCGGTTCGATTCCGCCCAGGTCCACCAGAAGCGCATTGCACGGATAGTGCGCTTCTGATGGGCCTGACCTGGTTTCGACAGGGGGAGATAGGGTCGTGAGGCAACTCGTCAGAGAAGACGTTAAAACTAAATCGAAGTAAATGCTAACGACGAAAAGTTCGCATTGGCCGCCTAATAGCCGCCTTGGGTTGTAACTGACCTCGAAACAGAAAAGTTACTGACAAGGGCTCCTTCGGGGGCCGTTGTTCATTTGAGGGCTTGGCATCGATGGCAGCATGGGGTCATCGTACTTTCCATGCAAAAAGTGGCGGTAGCAGACAGCAGAGCCGCCCGCAGCAAGGTTTCTCGGCGCAATCAATCACACACCGACCGAGCATTGTAAGTTCTTGATAAGAAAGGGCTTTCTGGAGCATACCGCCAGAAAATGCACGGAAAGTACAACTACCCCATAAGTGGCGATAGACTATCTCGTT 547004..548128 PHAGE_Marseillevirus: putative nuclease; pRALTA_0661; phage(gi284504209) 6e-06 MNQGENASERDVEGLDEGSGDGWGEYPLDAVFVRTETRSVSEVVKRIQNQRYVLDPDFQRDFVWPNPKQSKLIESCVMRIPLPVFYVAEALDGRIIVVDGLQRLTTFARFLGDELKLTGLASDNVGLGAHVLEGKYFKDLPLNLQERVQDTQLTMYILDAKAPERARLDIFERVNSGEPLTRQQMRNALYNGPATQWLKQAAESDAFRSATGQSLNAKTMRDREAINRFCAFKLLGRKQYTAGDMDRFLAEGLRALTRLSQAEREELLFSFERVMALNRALFSDHAFRKSLASQNPGAGRSVINISLFEVCSVTMSDDGFSNLESRHDALREAIVDLVRDEEFARAITYSTNSTAAVQKRFEAMESTLSKVAQK 548125..549255 putative ATPase; putative exported protein; pRALTA_0662 N/A MIKTLDIENFKCFSSLRLRFGALTLLTGFNAGGKSSAVQPLLLLAQALRTSASAQKLPLNGPIVHLGTVGDVLPANASGSSLAFKVAGVEHEVTWTTSARASERHLEVTESRICDVAGSTNTPPTEAIKEPSTEVCRSITGLSYLSAVRDGLTDAYPMPESDEEVTDVGADGRFAPYWYDRYVDDEVQVARRHPGEPASSLRKQVDAWLATLFPHAQANVHHVPQVSLESLQFRISDFGAWRRPANVGYGFTYAFPILIALLAANDGQMIVIDSPEAHLHPFAQSQMGRLLAHFAAAGLQVVVETHSDHLLNGVRLAVKEGLLPPDELCVHFFSGTTETGHGVLTLAVDNEGRIASWPEGFFDQSEKDLARLSGWE 549258..550229 hypothetical protein; pRALTA_0664 N/A MRWYINDASLQGQYNDVPEFLALLQGLLSSRSRFAVLKSALHTTRALPHRNVTVSQTLREVLAATNLADLRRAVLIWLDRTGPFLDDDRQPEPEDYFECLGVDVTNTGLGEATRRIKAGNEATAFSFPGGVIEFGRSPLPVDHGIAEDRRGTYEVENLWALDSLATSAMNAGVEPTNWQQLVVAARERFPRLHIPNSLYENSVLAKEPFEAPIRDRAMALFKHLDDYMAGRMPDGSEGPNARAIVDQFFTGDRALFSGESPTNKRTFKQEMTFPDPDDASKEIFAHWHGKISHRYFRLHFEWPVAVDATRLKILYLGPKITKD 550484..550918 hypothetical protein; pRALTA_0665 N/A MPRNARQKSERATEELRTELAAARHEARDAAVAQAAALADRLAATEQAQRQSAGDLDTGAGGAGRSTGPGRARRSRRGARAPAAGRIAPGAARARLRGWTAAQDRRRAAPTTTEAQGEEQGAPARPGHPDDGSDSTDSSDDHEN 550902..551156 hypothetical protein; pRALTA_0666 N/A MTTKTERAEAICWIQAQMADYGLTMEELGAAGCFDPPPPPPSPAAAPVCYRNAEGLTWDGQGEMPSWLKRAVNAGQSVEFFRVG 551173..552333 hypothetical protein; pRALTA_0667 N/A MRLDSTKLNAMIEEGERLINPDEIHAPGSGDELVYPPALTLHGGTEAMLTFALDGMGVLRHVDAVPNGKQCGCVCPACNEPLIARHGAVRAHSFAHDSGAECRWAHETVLHHLAKVLIAQRGEFAVPGVDVVVERQGPVIPIRARGSLPGRTIYPQSVALEHLLFDVRPDVVITYGDRLLLVEIAVTHKVGQSKLARLQELGHAAVEIDLSRQRPSTVGELAAVLFRNDPRKKWLVNRKQDELRARLEAQCEADYQKHLEETRAFEARVAAWRSKEDCVANSFKEQTAEPLRVAEPSLAARTSLPGVRYAVSGGALVLYNGADNCLRIAIEGQPEALRDAVEQLSFGSDAVGYAMTKSAWARLMSEQGHRFGTITNDYEPPSEGTA 552538..552549 attR N/A ACGCCGCGCTGC 552570..553616 PHAGE_Xantho_CP2: hypothetical protein; pRALTA_0668; phage(gi448245209) 3e-10 MAELRSRFPETRALYREVCGLLFFRYGVTPTANKPYSLVRKGSMGTPAEVLQAFWQELRGRTRVTIDHPDLPDALKDIAAGAVRTIWQAANEAATGELATLRAEARAAASAAEAERAAARQSIEETQAALAAERQAHAATQARLDAGRAELEVGRRQLEALRTQFSTELERAREQVAIAQERAEASERRALRANWTRSAARQKSERAAEDLRTELAAARHEARDAAVAQAEARARLEAQAAALTDRLAAAEQAQRQSAGERDTVQAKLAAVQRRAERAEAEAALARQLLAELRPAPRERDGGGGRRRKTGGPAPTAPEAQNEEQGAPARPGHPDDGNDSSDGNDGNEH