gi|163842277|ref|NC_010169.1| Brucella suis ATCC 23445 chromosome I, complete sequence. [asmbl_id: NC_010169].1923763, gc%: 57.12% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 527846..529714 PHAGE_Megavi_lba: putative dTDP-d-glucose 4 6-dehydratase; BSUIS_A0538; phage(gi448825504) 2e-19 MSLKYPWQRLALLPRISKQIILVLSDCLLLLASAYLAFVVRFGFVFVPNLAQLFLILIAPLLAIPVFIRFGLYRAIIRYLAERAIWSIFQATAVAALFWVALVFLMELYGSTGLPRSVPLLYWLLSTVFISASRFGAKWLLRTAEHDKRYTSSALIIGIGEPARQLATALRSHSDTLVVGFIDPAGQLAGMDIIGLRVYRTEEIPSLIENYGIKQVVVSEPALEQKERQEFARLLGRLPVNTRILPPIADLTAGKYLVSALRNVEIDDLLGRSPVPPDTTLLREVVEGRRIMITGAGGSIGSQLCLTIAQWNPAAIVLFESSEFALYQIDRQLRQFASCTVVPVLGSVRDRACVEKTIRDHSIDTVYHCAAYKHVPLVERNPLVGIFNNVFGTLEVAEAALNTDVERMVLISSDKAVRPTNVMGATKRWAELVVYYYGRLAEQAGKKKAFYSVRFGNVLGSNGSVVPLFREQIANGGPVTLTHEDMTRYFMSIKEAAELIVQSGAIAQSGDTVLLEMGEPVKIRDLAENMILLAGLTVRNEENPQGDIAIEVTGIREGEKMYEELFYDPSLAQRTRHPKIMRAPQGSKAVVDIQESLAVLRTAMEKEDIEMVRKVLFEVIAS complement(529701..530708) phospho-N-acetylmuramoyl-pentapeptide- transferase; BSUIS_A0539 N/A MRFLLVSFFVSALLCGIGLFLLSHLLPANFLAARMSSRSNHSIAARQIGGLALIPAILVTLAIFAPDLEVNMQLFLCLSGASLLLWVVGGLDDRYELSEIIRLGSQLLAAITVLYGLGPDFRLLPNLLPYWLEATLIVFALIIAINVTNFMDGLDLMTVAGLGVPLVGIALLGALGLTGLTSSGIGAVAAGGLLGFALFNRPPASIFLGDSGSPPLGLIVGTALLLLARETHIVVALVLPLYYILDAGTTIVMRAAQGENILKAHSKHAYQIAKRSGWSVPKVVAHVALLNTILIACVVALLALDHPLAQLTFLLVAAVATLILLLDFRGRFRKL 531086..531157 tRNA N/A TGGGGCGTAGCCAAGCGGTAAGGCAGCGGTTTTTGGTACCGCCATTCCCTGGTTCGAATCCAGGCGCCCCAG 531367..532185 PROPHAGE_Brucel_1330: ISBm1, transposase orfA; BSUIS_A0541; phage(gi23501424) 5e-25 MAGEFWLDDQQWAVIAPLLPTNQPGAHRTDDRRVISGIIHVLRSGCRWQDCPACYGPPTTVYNRFHRWSAKGIWRRLFEALVQPTDRDIHMIDSTTAKAHRPAAGGKGGDAEAIGRSRGGRSTKIHAVVDSCGRPVALRITPGQRGDAPIVILLLGVSFQEVVHSERIEETGVTIPQFSRIAPNENPQECPTDAIASRRNGGRSSRRQADEGAGCTPLWGLAENCFSLDRTVQDIWPGGDDGSLVAPHPQPPSNGPGHCRTDTPSSQTTPDR 531917..532860 PROPHAGE_Brucel_1330: ISBm3, transposase, programmed frameshift; BSUIS_A0542; phage(gi52430457) 0.0 MKIHKNARLTPLRREEMAVAVLGGRLTKAQAARLYGVSLKIVSRWTERFRISGRAAMTDRSSRPTRSPRQMGQDIVERILHLRRQRLTGKHIAMETGVSPATVSRILRRAKLSRMKDIDPVEPVIRYEYAEPGGLIHLDIKRLGRFERVGHRITGNRTRQSNARGVGWEYVHVCIDDVSRIAFTDIFPDEKHHAIAVLKAAVAYYASLGVTVTRVMTDNGACYIAKACKALDLKHIRTKPYTPKTNGKAERFIQTALREWAYARAYPSSQIRKAHLPNWTHMYNWHRPHSGLKSKTPISRLGLNRDNLLTLHS 532333..532347 attL N/A CATCAAGCGGCTTGG 532917..533147 PROPHAGE_Brucel_1330: transposase, interruption-C; BSUIS_A0544; phage(gi52430458) 9e-40 MRDFLTARGTQRVIPNNPTRKRIRPFDPIAYRRRNIIERTFCRLKDWRRIATRYDKLMINFAATCYIAAIVTWWIN complement(533272..533535) hypothetical protein; BSUIS_A0545 N/A MLRVSPLLSQKVFQSGVVEHRICQEPFQLCVFVFQRLQPLGLGHVHAAELGFPFIDAGIADAVLATKLRDRRARLVLLQNADDLFRL 533398..533523 PROPHAGE_Xantho_33913: IS1404 transposase; BSUIS_A0546; phage(gi21232568) 4e-07 MDVSEAKRLKTLEDENTKLKRLLADAMLDNAALKDLLGKKW 533520..534239 PROPHAGE_Xantho_33913: IS1404 transposase; BSUIS_A0547; phage(gi21232569) 4e-50 MTPAASRKAVAHLMDHHQMSERRTCKAMGFCCMAIRYETRRSDDHDLRERMKALAHERRCFGYRRLQVLLRREGHLVNHKWLFRLYREEKLTVRKRGGRKRAIGTRAPMLIPPAANVRWLLDFVSDQLTDGRRFRVLAVVDDCTRECLPLVADTSLSGLRVARELDRIIERRGKPKMIVSDNGSEFTSNAILHWVDRTKMEWHYIAPGKPIQNAFIESFNGQLRDELLNETFFSSLTHA complement(534575..535354) PHAGE_Burkho_phiE255: gp30, formyl transferase, putative; BSUIS_A0548; phage(gi134288807) 8e-12 MAIAPNTRVLVAGYGLPAEFCVTTLIGMGVEIDKIAVATHREDNRNCGLHSMLRLRNIQFTTAAANSEEFYEFGANFDPDMIISMHYRSLIPGRFLKLAKKGSVNLHPSLLPAYRGTNSVAWVIINGESETGFSYHRMDENFDTGAILLQERISVEETDTAFSLFHRQIARAMLRLEEVILKLDQGDPGFAQLGEASYYARELPFGGVIDPRWSEVQIDRFIRAMFFPPFPPAVLKIDGKVYYVPSIDIYRSLMRAIPS complement(535381..536235) WbcT protein; BSUIS_A0549 N/A MIRDSGAPRRVLWLLNHTTLRECEVPLLQSMGFEIFTPKRFPRNSDNRSASVSFETDESLTIPASVIDELNSYDFYQAPVNPRIDFLINYYFENAIVAYMFPMFTQIISRFKGRILLRAFGLTSETWTYFDFANFVAGSFFKRTWMKASNQFWFAASYSSLIEIEPNFIRERTVLLPVGLPERILAKQDTWRGGDKRIMFVCPDIETYPEAKAAYSESKHVFGNLSHVICGNQTIPVVDDDNVVDRLSAEDGGRLPIAMSCTNCSANCTNVTQVGMQSRVSIYA complement(536232..536990) PHAGE_Amsact_: putative ATP-binding cassette transporter; BSUIS_A0550; phage(gi9964444) 5e-10 MIQPSITLSNVHLHYAASAFKERSVKTLVNALLSMRRSAGANIEDIHALKGISVDIARGERVALIGHNGAGKSTFLKTIAGLYPISSGTLKVTGTVRSLFDIGLGFEPDATGRENILYRGLLLGLTPRFMREIEDEIIEFADLGDFIDYPIKTYSAGMQVRLAFAISTAVDGDILLLDEVIGAGDAAFMTKAKARIMNMVEKAEIMVLASHDLANVRQLCTRALVFKAGTIAFDGRVEDAISFYNSGMGAIA complement(536987..537769) O-antigen export system permease protein rfbD; BSUIS_A0551 N/A MISYMANVWKVRHFWWHLSMSDLRGRFRRSSLGILWAVIQPLALTLLLSFVFSKLLNQSISAYAPYILSGIIIWEYISFTVVGGSTALVQADAYIKQTRNPLAIYTLRNTVSGLVVLSVASISLFGWVLIMFPENFSLSWLAIPTLLPILALIVWPLATIVGYIGARFRDLPNALALVLQAAWFVSPVYFKESMFRQGGLNAFVDYNPIYHVMQILRAPVLYGEWPTATNYIWCLGVSLLLTCVAVAVGMRAEKRAIFYL complement(537784..538887) PHAGE_Bathyc_BpV1: hypothetical protein; BSUIS_A0552; phage(gi313768026) 2e-22 MDIPVYSPYLCGNFKKYVNECLDTGWISSRGEFISRFEDAFAQYVDVPSATSVANGTVALHLALDALGIGAGDEVIVPTFTYIASVNTILQTGATPVYVDSLENTLQIDPEGVRLAITERTKAVMVVHLYGHPCDMDSIREICDEKSLLLVEDCAEGFGTKWKNSHVGTFGDVATFSFFGNKTITTGEGGMVLARNPQVMEKCRHLKSQGTSPTREYWHDALAYNYRMTNIQAAIGLSQIEMADEILSLKARTAASYASKLAGLPLRMHTPVGDVKHSYWMCSIVLDNSEHREPLRQHLRENGVDTRPFFPPAHRMPHSASTGSYPVADSLSARGLNLPSLPHITDVEISFVCDLVRSYFSNHSNHI complement(538895..539983) PHAGE_Acanth_1: hypothetical protein ATCV1_Z804L; BSUIS_A0553; phage(gi155371751) 7e-135 MKKVALITGITGQDGAYLAELLLQKGYAVHGIKRRTSQFNTARIDHLYHDPHEQGVDLTLHRGDLTDTSSLVRIMQLVRPDEVYNLGAQSHVAVSFEEPEYTANSDALGALRLLEAIRILGMEKQTRYYQASTSELYGLVQEIPQKETTPFYPRSPYAAAKLYAYWITVNYREAYGIYACNGILFNHESPLRGETFVTRKITRALARIKIGNQNRLYLGNLDSLRDWGHARDYVEMQWLMLQQDQPEDFVIATGKQYSVREFVTLAAKDIGIEMRWEGSGEAEKGYDAKTGACIVEVDPRYFRPAEVETLLGDATKAHQKLGWKPKISFETLVSEMIAEDLAAAARENLLREHGHQFFAPKE 540502..540930 PROPHAGE_Brucel_1330: ISBm1, transposase orfA; BSUIS_A0554; phage(gi23501424) 2e-79 MTRRRYELTAHEWSIISPLLPNKPRGVARVDDRRMLNGILWRFRTGSPWAEVSERYGPPTACYNRFVRWRKAGVWDRLLEAVSKAYDGDIVMIDSTCVRVHQHAATGKKGMETMVAWDVPAAGLRAKSTRSLMPKVARSIYV 540849..541223 PROPHAGE_Brucel_1330: ISBm1, transposase orfB, interruption-N; BSUIS_A0555; phage(gi52430459) 1e-66 MGRSRGGLTSKIHALVDAEGRPVNLRLTGGQIADCAEADALTNELGEGDILLADKGYDTNAIRARCLVPACDGVELSPTQRRELRDKFFTAAPRPRTPFEQSYSDRKLRPRSLRGGTASMRKRS 541253..542047 PHAGE_RD114_retrovirus: gag-pol precursor polyprotein; BSUIS_A0556; phage(gi157939613) 1e-05 MPMGPKERRSTVLAPVEEAAIVALRVQARLPLDDVYIALKDVIPHLTCSSLHRCLQRHGISRLPKGDREKPKKFKDYEIGYFHIDIAELRYEGGKGFLFVAVDRTSKLVFARIYRKATKLAAAGFLKSLIRTVPYRIHTILTDNGVQFVQREQGTGLTFSHIFGRVALEHGIEHRLTKPYHPWTNGQAERMVRTIKEATVKSFHYSSINEMRRHVRDWLTAYNFAKQLKALKFKTPYEAIHELWKSKPEAFIVKPHHHMMGPNT 542117..542485 PROPHAGE_Brucel_1330: ISBm1, transposase orfA; BSUIS_A0557; phage(gi23501424) 5e-17 MSRRSLTDEQWNRIEAYLPGRVGTPGRSGVDNRLFVDAILWMAANAAHWRDLPATFGKWTAVHARFRRWSHAGVWERLFHALADTPDFEYVLIDSTISKVHADAAGAKGGLKLPASVARAVD 542482..542874 PROPHAGE_Brucel_1330: IS711, transposase orfB; BSUIS_A0558; phage(gi23501420) 4e-72 MTTKLHAVVDAIGLPLRIKPTPGHYGDCPQASSLLSGLKGVGHVIADAAYDADHLRAFIASNLKATAQIKVNPTRSSVPTIDWRLYKERHQIECFFNKLKRYRRIALRCEKTLTAFMGFVHLACAMIWLR 542875..543114 PROPHAGE_Brucel_1330: ISBm1, transposase orfB, interruption-C; BSUIS_A0559; phage(gi52430460) 1e-41 MQTRPKVAERKAWANIPPKSNRKDSFVFSRWVCRQRSLVERFFNRIKQFRDIATRYDKRPENYLAAVKLVATRIWCQSL 543245..544363 PHAGE_Ostreo_2: putative glycosyl transferase, group 1; BSUIS_A0560; phage(gi314055103) 4e-05 MRIGVDARNLVNNITGISRYVMENCRELYERGHELVLYTPEKPRVQLSSSEGFDFRVSNFQGPAGRLFWSQTVLPLQLRKDRIDVFWGPAHRLPALKGAIPSVVSIHDLVWYYASSTMRLQGWLADRFLMKGALRNADQIVAVSYATSSAISSVFPQYTSKIQMVYPGVSHFNRIGTSNILKEHRINKSYGLFIGTLEPRKNLIRLLEAYANLPECVRNNFLLVVAGGKGWNLGDIGKTINRLGIAEYTRLTGYVTDSDLNDLYRNARTLLMPSLYEGFGLPIIEAQAYGVPVITSNCSSMPEVAGDAAILVDPLNVAEISNALYRIATDNKLWQRKSLLALQNIERFNWHNSIEKLESVFIKARESKLMTY 544421..544789 PROPHAGE_Brucel_1330: IS5 family transposase orfA; BSUIS_A0561; phage(gi23501422) 1e-66 MSDLLLLSQAQVCRIKPYFPLSHGVPRVDDRLILSGIIFVLRTGLRWRDAPREYGPHTTIYNRFIRWSRLGVFNRILAELAAKRGKPDQLMIDATHLKAHRTAASLLKKGMFPDVLGAPKVA 544885..545226 PROPHAGE_Brucel_1330: IS5 family transposase orfB; BSUIS_A0562; phage(gi23501423) 2e-62 MLHAFPKAKDLLADKGYDADWFRDALAERKITACIPSRANRKDVIPYDPVLYKRRHKIENMFGRLKDWRRIHTRYDRCAHTFFSSICIAAAVTVLQINSDFNVLKNVSTIALS complement(545316..545903) PROPHAGE_Escher_CFT073: transposase insF; BSUIS_A0563; phage(gi26249410) 6e-29 MRQLFSSGLRQMREQSSELFSCRTVDEVSIHRSGEEGIPHISSLPCHGRKPKWLFRLEYRPVRRRQRDDLVMLAHMRTAWSLGRHRIARLIRENAMQARQKRRFRKTSDSHHAFPVAPNILAQDFAATGPNQKWDADISYIWTKEGWLHLAGVIGRFARRVVGWSVSDRLHRQLALQALEKAITMRRPPKGLIHH 546035..546463 PROPHAGE_Brucel_1330: ISBm1, transposase orfA; BSUIS_A0564; phage(gi23501424) 3e-79 MTRRRYELTAHEWSIISPLLPNKPRGVARVDDRRVLNGILWRFRTGSPWAEVSERYGPPTACYNRFVRWRKAGVWDRLLEAVSKAYDGDIVMIDSTCVRVHQHAATGKKGMETMAAWDVPAAGLRAKSTRSLMPKVARSIYV 546382..546798 PROPHAGE_Brucel_1330: ISBm1, transposase orfB; BSUIS_A0565; phage(gi23501425) 5e-76 MGRSRGGLTSKIHALVDAEGRPVNLRLTGGQIADCAEADALTNELGEGDILLADKGYDTNAIRAKAAARKAWANIPPKSNRKGSFVFSRWVYRQRNLVERFFNRIKQFRGIATRYDKRPENYLAAVKLVATRIWCQSL 547688..549025 phosphomannomutase; BSUIS_A0566 N/A MVYVSAFLQHLSHNFSYETVYVGADLRESSPKITISCYRAIELTGRRAIWAGNVPTPALAAYAMARNAPAIMITGSHIPEAYNGIKFYRPDGEFLKDDEAPVRGLAEELLSKVVDGQRSVNLPAPLADVAEEYVSRSIGAFGRDTLAGMKIGIDLHSAVGRDILVRIFKGLGAEVYPFRRTENFVAVDTEALDSADISRARTFIAEHGLDAVVSTDGDGDRPLVIDDQGRQVNGDTLGILTARYLRAKTVVTPLSTTSALEESGWFENIHRTRIGSPYVVVEMARAVAHPVVGFEANGGFLLGDDVALKTGLLRRLPTRDAVLPAVAVLAQAKDQGMRLSEMVAILPSRFMKADRVKEVPGDRAAPFLHAIETSQSFRSNFSPLIAEPEAISTVDGVRMAFANGDTVHFRQSGNAPEMRIYIETDSAEKTDRMLSEFIAKLSETI 549050..550474 PHAGE_Acanth_1: hypothetical protein ATCV1_Z752L; BSUIS_A0567; phage(gi155371699) 3e-15 MREMLMRPVVLAGGKGTRLWPMSRSQRPKQFLALTGELSLFQMTLKRLSDPNRYSSPIIITNADYRFLVAEQALECGVELSDVILEPMARNTAPAIAAAALIASKDEQTLIHVVASDHNIEINDAYFQAVDTACNAARMGRLATFGITPTEPATGFGYIEAGELEESGACAIKRFVEKPKEEVAREMLAAGGFYWNSGMFLFRSDVFLDECRRYAPAVYEAAEASVATAQRDLDFVRLNSAEFEKAPDISVDYAIFEKTKLASVVPSPIHWSDLGSWDAVWKESKQDPSGNVARGPVSLHNTNNSLVLSEGVHVAVNGVDDLTIVASEDALYVGKLSEAQGVGTIVKALMKQPATAKLAEEHRTIYRPWGGYTHLLSGDRFQVKRLFIKPGKQLSLQKHPHRSEHWVVVRGVAEIVIDDKSLFLSENESTYISQGAIHRVSNPGKILLELIEVQTGAYLGEDDIVRFEDDFGRV 559651..559665 attR N/A CATCAAGCGGCTTGG