gi|159046605|ref|NC_009958.1|  Dinoroseobacter shibae DFL 12 plasmid pDSHI04, complete sequence. [asmbl_id: NC_009958].86208, gc%: 61.05%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
41793..41805                       attL                                                                                 N/A                 GGCGCACCCGGCT
41989..44979                       integrase family protein; Dshi_4111                                                  N/A                 MNVCFDRDTVMAVEIVDELLRGDAVPEDWTVAIETAVADRRPDLGPKDRNRIVARVIERVNDRRGLSLKKSHLHRPPAAIPPLRDAEWPPQAMEIIHLRHRLDEMLTAAGRSTLGADLPRLILACAALRGGLCRLEGLHALARAVGSGELTLTGADAFPNLVWIDLDLQIAKGTQQHTNTNPGSEYLRWFPDVTTLALIDRWRRLGPLTYHVPSSPAALYTDMLDLLGAPELKKQVPATRFPLVALAALEHVSGVALPVSVEAVASGHSVGLSVLPETWDALCTRGQPLKEPPDTRGAARTAQPQPSRTPKSAAPRPAPADHAKAQLLEALKECLDTHAATSSVKGRKAMSDALQTLQQEAVGIWHSLEALVSWYRTLLRNGDKPRTVKDYHSIVGRHVLAVMTEDDPRNLTPEALRDMFEQVLARSSYANPAHPLGRLAHFARHAERVLDWPDADFSGFGDQGKASATFVRTAALPMAIYPEVFDAILQTTDLSPDMAECYAVAFALVAWGGLRIDEAHGRVVDDIGTDLTVFVHATSSHGLKSEAARRLIPLALFAPPEVVAQVKSFVARRATVPDKTRDKLLDLGTLFPGDRFDTGTFRTLLQRTLGQMLGIAVRPHDFRHTLISALQLLFHLGADAVDTIEAVSGWNAKRQKRIRHALLGVCPDPRRAPRQISALAGHRDLSAISGTTYCHLTDLALGCLIQSAEERLPASVAARWLGLNRRSLRPFIDDNDTVRLEDLRGPLVNKMDIAWRTTRTGQLPSPEPRVAKPVRVTPTVVHAVLKMAEHDTDTLTIADQLNIMRDQVTHMLATAEDLMAATTQKKGARHVGAHDQDRPNWPVARFADQPGEVRFLARLLADAETLPPENMLKWSMVVLTHADRHRPCLRFLGAPAAQNWLELFPKAFPKSSLDILIRFPSDVTPEAAEKAWCTAIGAKGNYQTESSGHGTSVCPTAPGLIMLRKVSKKAKESRSFSTLRRAAFCIAVTCRVTDEA
45616..45843                       prevent-host-death family protein; Dshi_4112                                         N/A                 MPRITATEFQQNVGAYSDAAQREPVIITHHNRDRLVLMSAEAYARLQAFEAAEETALIEARMAAQRVTVEKLARR
45840..46232                       PHAGE_Entero_P1: Doc; Dshi_4113; phage(gi46401725)                                   1e-08               MTEPFWVSQAGVLRIHDLGLEIGGGAAGLRDAGLLASALARPVNLWAYGETDLFVLAAAYAEGIAGNHPFVDGNKRTGFMTADVFLARHGWLLSPVTDETHADMMVALARGQIDRGQAAAHFRDHAAPVP
46419..46973                       PHAGE_Escher_phAPEC8: putative dTDP-4-dehydrorhamnose 3,5-epimerase; Dshi_4114; phage(gi448260371)     3e-29               MQIEDTPLPGVKLLTPARFGDARGFFSESYSRRVLAGHGITLDFVQDNHSLSAQVGTVRGLHFQAPPHAQDKLVRCGRGRLFDVAVDVRRGSPTYGQWFGAELSFENGKQLLVPAGFLHGFVTREPDTEIVYKCSDYYAPECDGAVHWDSCGIDWGFEGDPVISAKDAAAVRLADFDSPFVYEG
46978..48018                       PHAGE_Escher_phAPEC8: putative dTDP-glucose 4,6-dehydratase; Dshi_4115; phage(gi448260373)     1e-87               MKLLVTGGAGFIGSAVVRQAIRDGHQVVNLDALTYAACLDNVASVADSPAYAFEHVDIRDRAALDRVFATHAPDAVMHLAAESHVDRSIDGPGDFIETNITGTYNMLEAARSHWVGQGRPEDFRFHHISTDEVFGSLGPTGQFTEETPYDPRSPYSASKAASDHLVRAWHETYGLPVVMTNCSNNYGPFHFPEKLVPVIILKALAGEPLPIYGDGSNVRDWLYVEDHADALLLVVQKGVVGRSYNIGGENERTNLQLVQTLCGILDELRPGPRPYAEQISFVTDRPGHDARYAIDPTRIATELGWRPSVTVEEGLRRTVQWYLDNEAWWRALQDRDGVGRRLGKAG
48022..48855                       hypothetical protein; Dshi_4116                                                      N/A                 MPDAPHHPRLLRHTPGTREPLGKNAAHRFASQHALVHYGSGTVFTFIPKNACTSLRISLALANGAIATVEEWNWVHKNNATFAATLPELARAPETALVLRCPFRRLASTFLDKIVSRQPDFWALYDRSAREIDPDRLTFRGFVDWIGRPGMLRANIHWRPQEDFLVYARYDHVFGMTGLDAFAAFFAQRTGHDHVDSRKFSGHTSAGFVPLEGGCQADTPLVELMVAKARGALPRAVDLFDDALAGQVARLYGRDLALLRDLARDAPLLFPEYGEEP
48852..49709                       PHAGE_Escher_phAPEC8: putative dTDP-4-dehydrorhamnose reductase; Dshi_4117; phage(gi448260370)     1e-33               MILVFGQTGQVARELAARVPEALFLGRDAADLSDPDACAAALRAAAPSAVINAAAYTAVDRAEAEEDLATRINGAAPGAMAVAAAELGVPFVHISTDYVFDGAGTAPFAPDAPVGPLGAYGRSKLAGEEAVRAVGGVHAILRTSWVVSAHGGNFVKTMLRLGAERDSLSIVADQVGGPTAAGDIAAACLKIAARLAADPGKSGTYHFAGAPDVSWADFAREIFGQAGLDCAVTDIPSAAYPTPARRPHNSRLDCSSLQAAFGIARPDWAESLSGILRDLGHTPRP
49744..50616                       PHAGE_Escher_phAPEC8: putative glucose-1-phosphate thymidylyltransferase; Dshi_4118; phage(gi448260372)     1e-85               MTQRKGIILAGGSGTRLYPITIGVSKQLLPIYDKPMIYYPISVLMLAGIREIAIITTPEDQAQFQRAIGDGSQWGVSFTFIVQPSPDGLAQAYILAEDFLNGAPSAMVLGDNIFFGHGLPDIMAEADAQTAGGTVFGYHVADPERYGVVAFDSAGSVKQIIEKPEVPPSNYAVTGLYFLDGSAPERARKVQPSARGELEITTLLEMYLADGLLSVKRMGRGYAWLDTGTHGSLLDAGNFVRTLERRQGLQTGSPDEIAYDKGWISAEALQARAEKFRKNNYGEYLGQLLK
51885..51897                       attR                                                                                 N/A                 GGCGCACCCGGCT