gi|158311867|ref|NC_009921.1|  Frankia sp. EAN1pec, complete genome. [asmbl_id: NC_009921].8982042, gc%: 71.15%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
773607..773618                     attL                                                                                 N/A                 GGCCCGGCGGCG
783662..787864                     PHAGE_Feldma_virus: putative hybrid sensor histdine kinase; Franean1_0666; phage(gi197322490)     2e-23               MSADASPDRQQFPASAGDSGGPPAGATATLPVNGTGTGAATGPGGGTDALLSSLLTGLDRLVDGEFGVRLPIGDGVGGDVARRFNELAGMQERHAREVSRVSKVIRRDGRLTLRMDDLGGSGGWDELTLSVNSLIDDLARPTHEVARVIAAVAEGDLSQQMALEIAGQPVRGEFLRIGTTVNTMVDQLSSFADEVTRVAKEVGTEGNLGGQAKVMGVSGVWRDLTESVNSMAGNLTSQVRNIAQVTTAVAQGDLSQKITVDARGEIHELKSTVNTMVDQLSAFADEVTRMAKEVGTEGKLGGQAQVKGVSGVWRDLTDSVNVMAGNLTTQVRSIAEVAAAVARGDLTRQITVDARGEVAGLAHTLNTMVDQLSSFADEVTRVAWEVGTEGNLGGQAHVRGVSGVWRDLTESVNSMAGNLTSQVRNIALVATAVARGDLSQKITVTAQGEILELKETLNTMVDQLSSFADEVTRVAKEVGTEGNLGGQAHVRGVSGVWRDLTESVNSMAGNLTSQVRNISAVTRAVARGDLSQKITVTAQGEIAELKDTVNTMVDQLSSFAAEITRVGREVGVEGKLGGQATVAGVAGTWKDLTDNVNQLASTLTIQLRAIGDVSTAVTRGDLTRSITVEAEGEVAELKDNINQMIARLRETTEVNAQQDWLKSNLALIGSKMQGQRDLYTVCQMIISEMTPAVNAQQGTVYLLDFIEGDKLRYVAGYGSVPRRRSDGTFLFGEGLIGQAALEKKRIRVEDVPAGYLNIRSGLGEAPPCDLVVVPVIFENQVLGVIELASFTPFSDLHLTLVDQLVDTIGVVLNTIMANARTEELLAQSQRLTQELRSQSVELQRTNNELEEKAALLEEKNQEIELARIGLEEKAEQLALSSQYKSEFLANMSHELRTPLNSLLILAKLLADNPDHNLSQKQIDFAETIHSAGSELLGLINDILDLSKVEAGKMNVDAGPVRTAALCDAVAGVFGPTAEEKGLTFEISVTEDVPDEFVTDEQRIQQVLKNLLSNAVKFTDAGTVRLDVAVASPDTPFVAPSLRSAPMVLSFAVTDTGIGVAAEKLRMIFEAFQQADGTTSRRYGGTGLGLSISKEIARLLGGSIAVSSQIGQGSTFTLFVPSVMPPEAPAGPHPGEPDGVLMIVDGAVQPRSRTDGGDDGRGPVLAGVERAALVPAERRPAAPESPGDAAHRESAGPAPAGTSNGAGTGRQRDGERVYGAPGRPVEPKAARRLARTSWSGRGGTDAAGDRTPAEGTPFLTDPQAPARPPTTNLDGGDPLVGASILVVDDDVRNVFALTSALEMHGMRVLYADNGHDAIRMLQQDNAPVHLVLMDVMLPGMDGNETTSEIRAMPAFAALPILVLTAKAMPGDREKSISAGASDYITKPVDLDHLLGVMRSYL
788004..788648                     PHAGE_Feldma_virus: putative sensor histidine kinase; Franean1_0667; phage(gi197322366)     4e-07               MTERTGGPVDTEGASNTERPRSKILLVDDRPDNLMALEAILASLDQDLVTASSGEEALKRLLIDDFAVILLDVQMPGMDGFETAHRIKQRGRTRDTPIIFLTAIDREPHHAFRGYAVGAVDYIAKPFDPWLLRAKVSVFVELFEKNERLAELAHQRVRDFDLITEVAERLIALDVLLDGAATSNEETLAAASAEVRGLVSRLRPFARSTGGQPE
788796..789629                     PHAGE_Prochl_P_SSM2: phage tail fiber-like protein; Franean1_0668; phage(gi61805895)     5e-06               MAGGDPHAIAAEDLPRLRLPYADGLITIDRVRRLPDSPVCRVRPGDPAEGSVVTLVDFVMADPAQAARTATALVRAADLTAVAVHARYAPTAAAALAVCFAGRVRDARAGRGLSVRIVVADHRPELSGPPPGSAGVVAVGGARGPAGASAGAGDAGPGLIRVPHIVAIHDWPNGPSGPQGGPKGPVGVTDRVVWEIMSADQHRAWLGGVPGPDRDGLERHLGGLVALAGLVRAPGAQVPHREEVLRALAGGPLTTEAVHRHPGPLLAAAAVLGNREA
789736..792663                     PHAGE_Cafete_BV_PW1: hypothetical protein; Franean1_0669; phage(gi310831380)         4e-13               MVIARRHLERSRGNQPVSIGPYVVERQLLEAGTGPVYLGRDPEGGQVAIKVISAAFARDHDFRRRLRADLETVRALAPPCLADIIDADTSAHPPYVVTEFVDAPTLAATVAQGGPLAVPDVRRLAVALGSALTGLHGAGLVFGDLKPANVVLFEGGIRLVDFGLSRVLNTVALPGRGGSGPGMGTPAFITPEHVLRQPLTMASDIFTWGGAVLFAATGRLPFGNGSPQVLLQRAVYAEPDLTGLDPVLRDVVSATMRKDPSRRPGAAELLEVLGRLVGGLPAPTGLDPLEIAAAAAVSAAAPPTETPAAPPDEMSAVEAPADTAGVVPAAAVAVAEAAEPAPVPASAPDAAVAPDPTPDSDAEPAPEAPAESEPTAESEPTAESEPTAESETKLELGPEASLEPEPTAKSEARPEPESGPGAGTGAAASAAAEPGIGRPPAQSSEAAQSSELSEPTALAALADGRRRPDGHWLFRLFMAGIASLAVLTMAVEITGAVRAQAAVRASKATAGQARALLERQPDLAGQLAAAAYEIAPTAAAGEALIAAAVRRSGHLPGDVRDLAVAPDGSSIVTAGDTGAGLWNLTDPSANRRITAFPVDGPAVSAVGYVSSPGRTAAAGQIIVTAAGPAGAGESKVQLWRVTPDGAVERLGVLAGHTGTVGEIAVSRAGDAIATGSSDGMLRLWDVTDPRAPAELAVLRTPGPITALAFSPGGDQILVGGAARLSLWSLHDPRQPRRQGLLHGEGVVAGASYSPDGRTLAVATTGLPDAATEPGSTAGVPMAVASSLAPPEKSRSVVEIYQPGDPRGLHRLTSFAPASGAGMVAFSPDGRALAVAAAAGGGDVGVWDMSNPARPRPRLALPTPAAPSDSAGPSDSAGPSNLAALAIAGSAPAAPEPAALESATPPPASLAPTALAFADGPARTLAVADGNGARVWDLDPRTARDQVCGRAQAEITRRDWRRYIPDRHYSPPCPRN
792850..794304                     PHAGE_Lactob_KC5a: putative minor tail protein; Franean1_0670; phage(gi90592623)     3e-10               MEIASRAGRMSGAAGALLREPARPARIRESPLATVLAVGTVCIGSFLGQLDASIVTIALADLRADFGMSLGLATWVSLSYLVTLVATIAALGRLADMYGRKLLTLYGFALFTVASVGAALAPGIGVLIVCRVAQALGAAMLQANSVALIATTVEPRRLTAALGAQGAAQAFGLSLGPLAGGLLLELGGWRWVFWAHIPAGVIGFVLGVLLLPRTRAHAPRTPFDWRGLALLVPTVSAVLLALSVGESARSVGPLAAVGGLVLVAALGGVLFVRRESSAASPMVDLPLVLHRAVGPRLAAGTFSFLVLFGLLLTIPQNSDDGAVAVGLLLATLPIAIGVAAPVAGTLVTRLGVRAVTSGAMVCVAGGLGLLAAGGSGPAVGVPSLALIGCGLGLFTPSNNGAVMAAVPAQQSGMASGVVNMTRGLGTALGVSVSALAYAAGGFVATMLLLAAIALGGALLAATAAAPTVPGSALPRQRENDRAAP
complement(794274..794957)         PHAGE_Lausan: putative alkylated DNA repair protein; Franean1_0671; phage(gi327409813)     1e-05               MTGDDARRVIPGVDPSAVFERVRLDDHSWVDVARGWMSGADELYDAVRDGTSWRQGTMWRYERHVTEPRLSAFIRSGRPVPFPALLDAYRALRRRYGVDFDGYGMSWYRDGNDAVAFHRDREMRWLDDTVIAILTLGARRPFLVKSRHLPPGRRILNDPMAPGGRDLAPAGGDLLVLGGRAQADWLHAVPRVPGYVGGRVSVQWRWTSRAGRPEIGPGYGAARSFSR
795061..795528                     MarR family transcriptional regulator; Franean1_0672                                 N/A                 MTVDQHANAVGLTEVVTRLRRVLRSSIRADIPWESLPMAQVELLQCVAERDGTRVGELAGLLRLAPNSVSTLVAQLTDAGLVRRERDPADRRAVALRLTEAGEQALTGWLQAHERRIGTAMELLADHDRDVIIAALPALGRLVEALDDRPRPPNE
complement(795577..796035)         hypothetical protein; Franean1_0673                                                  N/A                 MGRAVRVKAEVSQTTQDRAAQSQPELGQPEASQPEAGRSEESQPEESQPTSPHSDHGKSQHGYANSKDEYTARLRRIEGQVRGLQRMVAEDKYCIDILTQVSAATRALQSVALGLLSDHLAHCVAQAVAEGGPAADEKVREATAAIARLVRS
complement(796093..796749)         PHAGE_Gifsy_1: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; Franean1_0674; phage(gi169257214)     8e-06               MTLTIGKEAGTLTTHAGRAAGPSTALVPVTAAPPTGAPPGAVPLRASGAAPPGPVATAEITPTTGIAATAELTATTGLTTTSGLATTAAIATVAAGGRVVAAAAFSAVEPRPSACPLSARVELREEGAVIHLSGLLVASAASAARSAVARAATLGQREIIVDLAGVRDADPLGAVLLGAMSRHATRCGSRLRLRNAGPRVRQALDDRGVRVELLGPLG
complement(796941..798512)         amidase; Franean1_0675                                                               N/A                 MSDRPVSDRSTRRPTPPDLQADVLRAGYLAGRLSVREVVDGVYDRIAARGDDGVWITLVPRAEAMRRATELDVLLASARLGHAGPDGLGPEPGTAAGTGPSLPPLFGLPFAVKDNIDIAGLPTTAGCPDFSRLPAGTAPAVARLLAAGAVCVGKTNLDQFATGLSGTRSPYGIPASPFDPYMIAGGSSSGSGVAVADGLVTFAVGTDTAGSGRVPAALTNTVGLKPSRGLVSTRGVVPACRSLDCPSVFALSVPDAYRVLSVMSGYDEEDPYSRRFPGLGSPAPGGAPRTGAPRTEVPRIGVPRADQLDFLGDAGAAAVFGVGVDLLADGGAEVTEIDLGPFLEAGTLLYGGPWLAERYAAVEAFLQTVPDAGPADPVHPVIRAVLEPGAGITGAEVFRGLTRLRALRRSAERTWVDVDMVVVPTVPTTYRIDAMLADPIRLNANLGRYTTFANLLDLAAVAVPVGFAAGLPFGVTLLAPAGGDELLAAPAELLHRCSGLPVGAGSHSLLLPAATDVAAEILA
complement(798538..799281)         isochorismatase hydrolase; Franean1_0676                                             N/A                 MTVTTEPVAPASGGLTVGPVTAEPYNWPYDGSFSPATTAVINIDWQVDFCGDGGYVDTMGYDLELTRAGLAPTAALLGVLRPLGFMIIHTREGHRPDLSDCPPNKLWRSKRIGAGIGDAGPRGRILTRGEPGWEIVPEVAPLPGEVIIDKPGKGSFYATDLDLVLRRRGITHIILTGITTDVCVHTTMRDANDRGYECLILSDCTGATDPANHRAALHMVTMQGGVFGAVATSAAVRDAVSAALAAA
complement(799361..800125)         GntR family transcriptional regulator; Franean1_0677                                 N/A                 MVRPRRPWQMLGVMTPSPTTRASGSGNLRDHVYVALRHRLMSGEFSFRDRLGEERVAALLGVSRTPVREALTRLAGDGLVEKRQDGGYYPAEPDLAGLRDLYEIRVTLELRGLQRALESGAAHQAALLEPLRDDWRALRADPPTPDPAFVALDENFHITLSRASGNGELANMLDAVNARIRPVRMYDFLTADRIDLTITQHLDILEKVLAGEMEAGVRALRSHVGESMEVVERRAAQAITQMVLNRGRPPRSAI
800144..800401                     hypothetical protein; Franean1_0678                                                  N/A                 MTRLAGHAARGRAGIAAQAAAQVAVPAAVGAWPGPARGGGRSTRPRLSAYRAVYSVVYMKVKVETKNFLINTRAVTFTRRRLSTR
800425..801168                     PHAGE_Bacill_BPS13: putative tail lysin 2; Franean1_0679; phage(gi410492620)         3e-05               MEPRGAHGTRSTPQGGTTQGGPAQGAVAAGRGAGTAAGPAFLLLHGTATTGAVWSGVRAALAGREVHAPDRPSTGELAAEIAALAPSVAGRVLGGVSGGATLGLAMLAAGVPMAAAVLHEPAVGSLVPGLLTPMAEAFASGGVTAFGQRLYGPCWRPGHAPADIAMVERDLEMFLGFEPGSPPVGAPPVLITVGAQSPPVRHRAAAALRARFGLPVRVLPGCGHAVHLEAPELFAALLAETAAGLPH
complement(801192..801341)         hypothetical protein; Franean1_0680                                                  N/A                 MGDAPLPDHELPSDEREIGWGDETLLDENEADADLARLLADLPPHHVER
complement(801555..801941)         hypothetical protein; Franean1_0681                                                  N/A                 MPPADPPAAHPSAEHRPRRPIGGDEIRELIDRDEAYDENPYGEPPLLVARYRASLRAVLATEPAEPGLFERAWSQRERDAYRAGGQATHRVIVGAMAAALTATLADRAPADRAAAAARPTRPCDEAHP
802012..802251                     hypothetical protein; Franean1_0682                                                  N/A                 MVTMFAVDDGEQLVGIGDIAFQLKITRQAVDYWTRKDAKFPEPLQVINAPAGSGAKGTRVWRKREVDAWIVEHYRRRKQ
complement(802359..803054)         hypothetical protein; Franean1_0683                                                  N/A                 MGNSYYPSRWGRQRSELAQPLRTPLRQLTSGRTPAGSARAVVTPTAAARARPVGCLPGQVATDLPSLEPWAQAWSRAHAAGPHRPSPHPRSVPSPASSWFDATTPERRSSLRGDNKMARRQRTGRQSAAWADRRRDWCTQLNGFKDVRLIATGSSGRNPAGAPSVARVQDGGGVTRPVTGRRPAALTDHHGELGYRIPSIHEIGDRAPLERVESHTRRHLSWAFRAYCPFL
802810..802821                     attR                                                                                 N/A                 GGCCCGGCGGCG
803096..803668                     PHAGE_Clostr_st: putative IS transposase (OrfA); Franean1_0684; phage(gi80159862)     2e-21               MNLKEWAESQGVAYVTAQRWFHAGKLPVPARKVGGLILVGEPDRPATSGTVVVYARVSSADQKSDLDRQVACVTGWATGQGLPVDRVVTEVGSALNGHRRKFLALLRDPAATTIVVEHRDRFARFGAEYVEAALAANGRRLLVVDPAEVDDDLVRDITEILTSMCARLYGRRAAANRARRAVAAATEAAE

#### region 2 ####
4238575..4239471                   PROPHAGE_Escher_CFT073: transposase; Franean1_3578; phage(gi26248352)                9e-10               MHREDGPVAEQRMWVAHRRRKLAAVKALGSQVHALADLAFPGLTGCFRTGLESKTLRMLLASLPEPARIAAMDPSQLVAHAAAHDVRMLRPKAAEVIAAAAQAMCVPEAQRQVAARLFVQDAAAFEQLLRDLANCDQELARLLPLTPAAVLATVPGVGVVTASYYGAALGDPWRFANADAAYRYSGLAPTIYESAGRRAAGARISKIGSVELRQAIIALGTSIALHHPDFAAYRRRLRESGKKPMVSTIAVAHRAHRLAFAVLRSQQPFDEAQWAAAVSRSGNVRRPVRTTRKASITT
4239823..4240413                   PROPHAGE_Escher_CFT073: transposase; Franean1_3579; phage(gi26246249)                6e-37               MSVLTDLRNRGVADVFFLVCDGLKGLPDVVENVWPATTVQTCIIHLIRNTFRLASRADHDAIKRDLKPIYTAPTPAAAAAAMDAFEEAWGRKYRAVVWLWRNAWEEFIPFLDYDIEIRRLLCSTNAIESLNARYRRAVRARGHFPSDQSALKCLYLVTRSLDPTGTGRARWMIRWKPVIDAFAITFRDRWPSAESY
4240185..4240197                   attL                                                                                 N/A                 GTGCTCGACGAAC
complement(4240519..4241610)       PROPHAGE_Pseudo_KT2440: transposase, putative; Franean1_3580; phage(gi26991145)      2e-57               MILTDNQRNILESLAGGGGYDRSAAARARMVLWRDEGFSVREIAEKAGASKPTVRLWLSRYDEEGPDGLLSRVSPGRPREVPGRVRARILALTRTTPPPETGLSHWTSTEMARYLKRREGVSVSHTFVAQLWRENNLQPHRHRVFKLSADPDFEAKVEDVVGLYLDPPEGAEVLSIDEKPGVQARDRTQPPRPVASGRVATRTHDYQRKGTTDLFAALDVGTGRVTARCFPSHTRADFLTFMDQVIAEYGGAELHVVVDNLATHYGPDVDTWLRRHKNVTFHFTPSGSSWLNQVENWFGILTRNALQRGAFVSVQDLVNTINNYVKNWNWDAHPFEWTATAEEIVAKVEVLHREFRKLLANNL
complement(4241734..4242540)       PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; Franean1_3581; phage(gi116326757)     4e-16               MVAGAAGREGVAPKLAGRRALITGAGSGIGRATALRLAADGAGIAAVDVDLDAAAKVADEATALGVGALALSADVGDEAAVRDAVSAAVGHLGGLDTVVAAAGITRAGRTDETTLDAWNLIIRINLTGVFLTLKHALPHLCAADGGAIVTIGSVASLVAAGRSSSYDASKGGVLQLTRAVAVEYADRGVRANCVCPGVVATNLAANSQTIAGPLDAARGDNPQLRVSVPMARHADPAEIAGAVAFLCSDDASFITGAAIAADGGFTAV
4242721..4244199                   fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; Franean1_3582     N/A                 MSLVRSTAPTTQAQSIMNADVVVIGGGMAGLTAAARAAATGASVLLVERANTLGGSARFAGFVWTAPLHEVMAEVNPGGDVALRSALVDGFDGAIEWIRRLGVTVGDAVGVLCFGRGYPVDVGHYLDACARLVREHGEVLAGTETRALLREDGRVVGAELLLPDGQAREVRAAATVLATGGFQADPDLRARHLGPAARDVPLRSNPFSRGDGLRLAESAGALTGLPSAGFYGHLVPTRVRLEPELFVDLALYYSEHALLFNLAGERFIDETAGDHLTTMALLDQPEARGLLVTDARGHREWVTGAYAPGAPSTDKFALAQRRGARCALAASVAEFADMPQEWGYDGDRIHREIERVNARSETGTVRPERRFDSRPLTEPPYYAVEVQPAVTFPFTGIRTDSTGRVLAGGGGTVPGLFAAGSDTGGLYDRAYAGGLAPAVVFGLAAADAAMAQTAPSGVVTGGATPPASRTESEPTESQGPKASMRRSAGWTI
4244187..4245056                   PHAGE_Lactob_Lj771: minor tail protein gp26-like protein; Franean1_3583; phage(gi163932195)     1e-05               MDHLVLVVISGIASGAVYGLMGLGLVIIYRATDVVNFALASMATFAVYVALMCADNGWGVVGGLVAAVVTAVVLGLVVREAVIRPLGSGQLFAALVMTMAVSLIMESVVSDIWGTQPRAFPPLVTGDTSIGASTLANQDLVMIGVAGLAMLAVGWLFTRTMLGSAMRAVAESSDTAEIIGISSQRVARIAWGLGLGLAALAAVLYAPKSGLAPTVLSAPLFRAFAGIFLGGLTSMYGAVVGGLAIGVLENLAASYVSANFRDTFVFAFIVLILLVRPQGMFGTRSFERV
4245067..4247688                   PHAGE_Plankt_PaV_LD: ABC transporter; Franean1_3584; phage(gi371496158)              6e-17               MVLAKSLLPRVLAGPLLAVVLLVVVHGELIPAYQTYSLALAATYAVLVLSVGLLAGWAGVWSVGHPALFAIGAYTAAYGSAHGWGLEVTVLAAMALAGTCGAFLGFAGARFSVLYIALLTLAFSLVALEVINRWTGVTGGDQGVPVLELSSVLGLGSLGGGSAEAIDAAIVTAGVMLTVAALARPMGLRMRMVAAKSHPLAARSIGIAPEAQTALAFGASGAAAGLAGVLLALITGYVSPESFSLVFGINTIAAAVLGGVGTIAGAVVGGAFMAWSPTLADDIGVSQMVVQGTVLIIVLLLLPSGVVPAVARLGRAVFRRAVLPRAPWLRPRPGPASGFADGMADGTADRATGPAAPGLVPAARPEDAGGTASGGADAETVLEISDLAVTFGGLRALEGVSLSVRKGEVLAIIGPNGAGKTTLVNALSGLLPSGRVTGSARYRGHELLGRRATGRRGLGIGRTFQHAEPFGELSMLENLLCAHRWPTVRRRAEAWQLLEQVGLSDVADRSPHELPFGVRKRLDLARAIVAHPDLLILDEPFGGLDAGERALLATQVRRLRDEGVAIIIIDHVIEDLFAVADRVVAFDFGRPIGSGTPDVVLQDDAVRTSYLGAATVRPRAALAAGRGEPLVTLTAVGHRYGGVVALDGVDLRIPRGGILAAVGANGAGKSTLGKVVHGTVVPTRGTREVVQVDGRALRCSLMPEGRALFKSLSVRENLDVAAYAAGVRGALLRQRRDETMDWLPDRVRSRMSVSAGALSGGEQQLLATARALMAGPDLLVLDEPALGLAPAMVDEIYERIAGLAEQGLTVVLLEQLLSRALSLATDMVVLHEGTVAVTGSPADPGFAELAEHAYFGGAAAVASGTPLTEAVSR
4247404..4247416                   attR                                                                                 N/A                 GTGCTCGACGAAC