gi|157163852|ref|NC_009802.1| Campylobacter concisus 13826, complete genome. [asmbl_id: NC_009802].2052007, gc%: 39.43% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 1576683..1576694 attL N/A AAAATGCCAAAT 1576686..1581986 PHAGE_Aotine_1: membrane protein A23; CCC13826_0568; phage(gi360041016) 2e-05 MPNFDAIRIGVIKKIKGEAIAISRDGTMRVLHKGDEIYLGDDIKTSENSNLTIVFDDGKKAYVGFSSVFHTINVFAEHKGELVIPKNANILENHKEHANDDDQISHQELSSHGSSPHNFASASSGGIKFELGGHYSNIYDFYTGLRALEARHDELKWPVGEAKIGGVSYAGFGAQNLNFTPPEPNIVLNFNLTSDTGEKKGFLGGAQLNSLPKTPDGKKIITSIDAHIPDVAKNGDIITIKTNMKGGGKTSNYKINTITNELIPVDSTGTPTGAPPIPIVNGKAEITGVEILNHGKTTVTSSYTTGGRTFTAPPTAYELNDTPAISKVTATLDLDKNGDGVIDATELGYGSGTQTSGMKFIVPDELSTGDKITFKLNEPGKPPVEKKFTLDKENGTATDEDGNTYTFTTDENGAVSFSVPNIANITAGSSIETGVVDKFGNVSATSTTPSSSVSDTVKVTLTADKNGDGLISSDEIGDGTSNVEINLPRTIKPKESVTINIGGSPKEFVVSDNGTSVYDKNHPNVFIPIVNGKFEVPGVSVPVTPGSSVSISTAVNDEHGTPKPNGTSNQTTPSVVVAPPVKSAKISFDSDLGHNNRTPDGKIDTSENRYNDGDPTKTEASIKIPSVIKEGDKIAIDVTNPDGSKTHKIYTYTNGKIIAPDHNEVPLNDAKFKITVPIEHGKTTSITTTMMDKAGNKGESDTNEIKFSDSPVAKFVKDADGDGLIDDTTGAITTSDVKVYLPSSAVPKDELKISILNPLTNKQSTVSYILDGDGVHMINKKDPSDIKVISDGAITIPDVTVSSKRPTLVDATLIKDDGSAISGTSSGRLFAFGVLDYIDDVKLVTKIDNADIHSAKYLNEEDYEHIISTSQYESNLAQKINYNIALTNDEQPYIKFGINKPDTTSDGKGYVLIEIKDENANISDSFIAKIENNTVIADFEKVGKKLDRTHHIIDATYVGTDGVPQRDDNLTITVDLDSKPDKLIESDFDNIKNGSGSYAINFSGKGEAANNPHDEKSKDVEVIDAETSEKTTLTLDRNLSYSGSFNVAQNTGSKNYIVERLDDAGNLAVQTVTMVANKGLDVDMWFFDCTNTEFWSYDPAVTTGPRADNTSPGGYGYHVANHYEAWTKWAGTGVSATTTYNELSFQGGKDWKLKSTRPHAGELNTNDIAKVGHSPEASDTDHTGAHYNLNKTGNYVLEEAEPIGTDLIMKMKGWIYIKEDGQYNIAAKHFQDMVDVKIADESFGKWAYWFGSGDNGPHGGNHIYNLKKGFYRIEVDYVDRTQDTFLDIMIKKRSQNASDYKIIGSEGSGTHLFSDSYVKALHDKGYVSDEKDGLIAGKKGYRSLINQEKDSSKPTKYFGDDTDDFNKVIHLKHNNDNLEGSNLNDVFIYNGKNIDAKGGVDKLIFVEDTKLEKVSNLNDNLKSFERLQLGTENQAVSISFNTKNVLDIIDSRTTKITEGEYSTLTTVSGTESINTVLKILGDSNDIVKLINDGTNKFELATNEEVTLLNWKHSKAIGGSYNKVETDGHGHVREFQPDPTHNPDVWKTYKDASGKPIIDSYDTPVNHVYKGTYTDGTSTKTFFVEIDKNIKITHEGDDQNNTFTYEGNKIDAKGGVDTLIFTENVDLSRVDDLNDKLKSFETLQLGSNSAQAVSIGLDAKSVLDIIDSQVTDGGLKSVNTVLKIKGDNNDKVALDGKGTIFTQATDSEVAALNLKHSASGDTHNQVDVDASGHAINQVYKGTYGSGASMQTFFIEIDKDVSVVNLVH 1582111..1582188 tRNA N/A TGGTTGGATAGCTCAGTCGGTAGAGCAGCAGACTGAAAATCTGCGTGTCGGCAGTTCGATTCTGCCTCTAACCACCAT 1582217..1582309 tRNA N/A TGGACAGATGGGTGAGCGGCTGAAACCACACCCCTGCTAAGGGTGCAGCTCTTAATCGGGGCTCGAGGGTTCAAATCCCTCTCTGTCCGCCAC 1582301..1582318 attL N/A GTCCGCCACCAACCCCAA complement(1582376..1583269) PHAGE_Bordet_1: integrase; CCC13826_0638; phage(gi45569541) 1e-21 MFLNVKFKYYADLYLKLGKSEWKLSTYCKNKGIVKNRLNVFFDLDIYEVKPSVIRLWLNSIQDVSNKSKKHYLNSLSMILKLALEDEIIDKNPIIHIKSIVHKTPRIEPFTSQQVNDILRLSTRYNDKFQIFLYVGFFTGMRTGEILSLKMKDIDLENRVININSTRSRFGENTPKTIYSIRTIPILDNLYNKLKRYVENYQDNIYLLQTQYNEPYRDTGVFTSDFWKPILDELNLPYRRLYNMRHTYATSMLFQNFVTPVELSKLLGHSTPKMVYDVYVNYLNSNLKDFKRDISIY complement(1583269..1583880) PHAGE_Mycoba_U2: Putative DNA methylase; CCC13826_2272; phage(gi157786471) 3e-06 MKILNLFAGIGGNRLLWDNVLPGVKVTAVEFDPEIAKAYAKRYPNDNVIVGDAWDYAAKNYLDFDFIWASPPCQTHSRLNIANNIRNDRTKRLPDFRLYELIVYLKYFCKNTFVVENVVPFYEPLINPTAKIGRHYFWSNFYISEKYFEKSTKLLKDIVISDFTDFDLSLFKNIKNKRQVIRNQVDSSLGKYILCCALDKGLF complement(1583895..1585235) bacteriophage replication gene A protein; CCC13826_2273 N/A MRARNLYGVSPFDVELCQEKLDSQREYMRSFSFVNSLGQVKNLLDISMSANFSPKYYAEVSNRVNVFSSFAIDYFQVPVFLTITLNGCFRGALNGDYSKFKPIDYKYLPDEVKYKAKNLAPLTISDLVAVLNYQWVLFLKRYHKAFKKIDRSYIRCFEPHKKDGVPHIHALFYVPAYTLDFMKRIYTNIFYAPQNLKTNAITNEQEKNGELNGFQTSINNPSGYVMKYIQKTFINLKETQDFDELSAWYVKHKVRRFLSSRTKVPLWVYRKINFISSMQDFYHLNDLTNDPRALIEWNKKDDYIYINLPFNKEEIIYLNGRLEHYISGRLMNFYDRLKINNKVDEDASDEIKNFGNTLKQKQVLKICDELFKIETRVKPVSKMRDYELVNYYQSLGGDVNVQHLAYVENLMLDRELDNFTHYHKKHDLNAPDIDSFVDRFLICNEF complement(1585467..1585853) PHAGE_Entero_M13: phage assembly protein; CCC13826_2274; phage(gi17426227) 9e-05 MKENAIYIPNLNICVKDFYVKDKKVFLVNFDDSVSTSDYSFFDLHLILEDILSQSSSFTPIVSKKELKSSYSLKRGDVLVLSGINKKTNAKQRNGVPVLKDIWLLKYLFSVEQDSEINSVLTLTIQII complement(1585894..1586115) phosphonate uptake transporter; CCC13826_1101 N/A MEKVKNFLESTKVKVAAVGSTLLSAPVLFAADAPTVPSDPLKADYALFDYVFAGVIAVAFIFMIARRVKGFIK 1586807..1587043 sensory box protein; CCC13826_1102 N/A MNKREVAEFIGKDIKTIYNWEKNNPNLYKILEFYFQKESEINQKHKELIELFDKLNEKEQDFYISDIKARILKKEIGG 1587044..1587496 hypothetical protein; CCC13826_2275 N/A MKILTALSLFCIFLMANPIEIRIDKKNEQEKYIKDLNLIGDWNIETQRYFINFILTAGSNWNISFEKNHEILLDNQPREMFWKYNNEKGEISIYNKKEITIYGGDEIILKEYIGNKCFKAELNKNHQIKMCKTKGTIVNNVKDLIKIEMK 1587523..1587540 attL N/A GTCCGCCACCAACCCCAA complement(1587598..1588380) PHAGE_Bordet_1: integrase; CCC13826_2082; phage(gi45569541) 7e-21 MNVFFGMDIDEIKPSVIRLWLNSIQDVSNKSKKHYLNSLSMILKLALEDEIIDKNPIIHIKSIVHKTPRIEPFTSQQVNDILRLSTRYNDKFQIFLYVGFFTGMRTGEILSLKMKDIDLENRVININSTRSRFGENTPKTIYSIRSIPILDNLYTRLKTYIEKYPGNIYLLQTQYNEPYRDTGVFTSDFWKPILDELNLPYRRLYNMRHTYATSMLFQNFVTPVELSKLLGHSTPKMVYDVYVNYLNSNLKDFKRDISIY complement(1588755..1589966) PHAGE_Erwini_ENT90: replication protein A; CCC13826_1099; phage(gi431810936) 2e-07 MYGISETDKIFLKNKLENQKKFLDSNFFMINGEYVPYSNFYFSSWHNSNRYIAELNNRVASLNDYALSQGLCPIFAVFTLPSEYHKQKLVTLKSGKKKLVYNKKFIDDEDHSVSAGASRLQALVRKIIGSRCFRGIASDKRCYITTKEPHLDGTCHLNFLVFVPREKFNDCVRVIKDNFLDTHSRVETDIKNATSYVMKYIFKTLDDLRQNPDLDNLTDISYWYLKHKIRRFTMSQTFISLEIYRKLNGRVDLISLTKNYNKGLVTVLLDPETKKPLQIFDEFGDLWHKLKVSKDETTIRYQNVSSEIKDFGDTLKQRQILKICDELFKAEKKVKPVSKMRDYELVNYYQSLGGDVNVQHLAYVENLMLDRNLDNFTHYHERHDLNAPDIYSFVDRFLICNEF complement(1590015..1591184) PHAGE_Vibrio_fs2: putative maturation protein; CCC13826_1100; phage(gi9630770) 1e-08 MGEISSITGKNIVISGNVDTNFDVFLPTLDLSNTDTFSKLLKDILNVNGLDYLIQDSVLLIYNPKVEDKPVLKDYIIKFKHISKEDVVSALSLFSENIKYTVYSDRILLITTESQYKIIDNLINGLDTSYQLRQLSFTIISTDNTKLKEIGPRIESLLNPLDHFYFKIITNVLTVDSTKVNKDSVTSLINLLKEKGVSDLIYNPRVTVIDNKDSVIESVIKTPIQKSSIDIQNSQSITTNQVEYQDVGLKLYISSVLITNDSVSFTLDLYIENLLDDTLTPRISSRHLKTNVYLTDTNSFLIGGINSKETIKSTKTIPFIENIPILGDITTYKSEKTSDYSFSIFITMLPSEKDIFSEFYYDPADKHLALERYLTSASRNAKGAPRSGE complement(1591228..1592352) PHAGE_Vibrio_fs1: hypothetical protein fs1p06; CCC13826_2276; phage(gi23455828) 6e-06 MLSLIIGPPRSGKTYKAVHLINDEYELHLKGESKYRFIYTNINGLKFDHFDGFVKQYDKNDFLTAVSQEYTLSSQYENGFLDNVDNYDEYALKSGIYENYHHCLIVLDEAYNTFTKTFNDSLGRFLSYHGHFGIDIIFLFQSKRQTNREYLVHTELMYMAQPSGKRLFSKLFKYKVYSTSSQVNDNLINSENLKFNQKISNLYSSGSNEIYKSYATKKILFLLAFIVFSYVVYKFLEPKHEPAQSTKQETRFVDLNASDSKNIKAISNDADKSDINTTIFNDNKIYLRITCFPSGCKFRNYAIDLSLDSFLELLSSSNCHIFLHDKKSGNYIDYFVSCNSEFERVLKGLENSSQRVCNEKSPQTDSSSMFPTHK complement(1592354..1592800) hypothetical protein; CCC13826_2277 N/A MKWLIGAVGGFIVNFIEFLVKKIGIRNTILAFIVPIYASFVAFLIAFAGYAILFIMKIWNLLREYIPKMFDYGSSVSDSFGGLSNQTVLNSAMEFLHQSGLASAFSTAMTLFISILSLFFALQLYRVILYVRANMTKIITDLLTLMSR complement(1592797..1594923) PHAGE_Spodop_MNPV: cg30; CCC13826_0183; phage(gi125860200) 9e-08 MKFLIKIFCLLGFLSSFGFSKDVWVKTDDLFGPIFPVENCEFFLGKSFFKCTNPETGTYKVFSTYVVTDYLYFNPTKSSGYFFDTNYYYFVDKVRYSGYFSYVNKYSSYLYSESDAKNGQLFTYTNITEFRVNDPLAECSANQAFNSETKQCVSCPKDHIFNNNTGKCEPELKRPDWCPKPMIYNERKVELLLRDKIVEECLPDPKIDKPTCEKMGWQFHDGCYDNLSGAEMATCMQFPEGCYAPETVNRFKAEIQLENDLFIMGGFMIPLPINAFKNGLSSFGSFLKGLFSSGAKPANLNLLEYRPQIVDVKATISGPEPVFNLNPVDDNAIVFNSVFKETGKLDTTASASSNIVKSPQATADVSPNLRKFDLPKDASISKLENNTIVTAKLKDMSKPIPTKEITVPNEVKNINLDYDLNTMFKASDKPTPNLPMTIKQTSNAGNKATYKGNIVTPDKSVIDVDVVETTNPSGSRVQDVTYSYVYRTPSGSSKFSTGYVNTIDSSNKVTNSIPKDSTSTNSSGSSSNSGIGGSSSTTTPSQPTQSIDLSSLEQALNRNSAKLDTINDTLTSIKNQQQEQWNYEPNVNTATSFSALQSELTKFDVSVNDAFNFLNNFKGDIDNLMNNFNESLDIINKGIDAPDIPKGTCPFSISGPTPGSNTKNLFEIDPCRFVAPYKSILTLFFTIWFSFEIIMFSLKYLFRVGGES 1594955..1595095 hypothetical protein; CCC13826_0184 N/A MSLLFVLRKKRSLKLRKEKFISKKLFHKRESYNVYKNRHKKERENI complement(1595477..1595698) phosphonate uptake transporter; CCC13826_2278 N/A MEKVKNFLESTKVKVAAVGSTLLSAPVLFAADAPTVPSDPLKADYALFDYVFAGVIAVAFIFMIARRVKGFIK 1596357..1596405 attL N/A GATTATTGCATAATAATTATAAAATAAATCTTAAATATTGGAATAATTT 1596412..1596648 hypothetical protein; CCC13826_0164 N/A MNKREVAEFIGKDIKTIYNWEKNNPNLYKILEFYFQKESEINPKHKELIELFDKLNEKEQDFYISDIKARILKKEIGG 1596649..1597101 hypothetical protein; CCC13826_2078 N/A MKILTALSLFCIFLMANPIEIRIDKKNEQEKYIKDLNLIGDWNIETQRYFINFILTAGSNWNISFEKNHEILLDNQPREMFWKYNNEKGEISIYNKKEITIYGGDEIILKEYIGNKCFKAELNKNHQIKMCKTKGTIVNNVKDLIKIEMK complement(1597203..1598111) PHAGE_Clostr_phi3626: putative integrase; CCC13826_2077; phage(gi20065985) 5e-21 MQWVLAMQNVKFKYYADLYLKLGKSEWKLSTYCKNKGIVKNRLNVFFGMDIDEIKPSVIRLWLNSIQDVSNKSKKHYLNSLSMILKLALEDEIIDKNPIIHIKSIVHKTPRIEPFTSQQVNDILRLSTRYNDKFQIFLYVGFFTGMRTGEILSLKMKDIDLENRVININSTRSRFGENTPKTIYSIRSIPILDNLYTRLKTYIEKYPGNIYLLQTQYNEPYRDTGVFTSDFWKPILDELNLPYRRLYNMRHTYATSMLFQNFVTPVELSKLLGHSTPKMVYDVYVNYLNSNLKDFKRDISIY complement(1598360..1599571) PHAGE_Erwini_ENT90: replication protein A; CCC13826_0020; phage(gi431810936) 2e-07 MYGISETDKIFLKNKLENQKKFLDSNFFMINGEYVPYSNFYFSSWHNSNRYIAELNNRVASLNDYALSQGLCPIFAVFTLPSEYHKQKLVTLKSGKKKLVYNKKFIDDEDHSVSAGASRLQALVRKIIGSRCFRGIASDKRCYITTKEPHLDGTCHLNFLVFVPREKFNDCVRVIKDNFLDTHSRVETDIKNATSYVMKYIFKTLDDLRQNPDLDNLTDISYWYLKHKIRRFTMSQTFISLEIYRKLNGRVDLISLTKNYNKGLVTVLLDPETKKPLQIFDEFGDLWHKLKVSKDETTIRYQNVSSEIKDFGDTLKQRQILKICDELFKAEKKVKPVSKMRDYELVNYYQSLGGDVNVQHLAYVENLMLDRNLDNFTHYHERHDLNAPDIYSFVDRFLICNEF complement(1599620..1600789) PHAGE_Vibrio_fs2: putative maturation protein; CCC13826_0019; phage(gi9630770) 1e-08 MGEISSITGKNIVISGNVDTNFDVFLPTLDLSNTDTFSKLLKDILNVNGLDYLIQDSVLLIYNPKVEDKPVLKDYIIKFKHISKEDVVSALSLFSENIKYTVYSDRILLITTESQYKIIDNLINGLDTSYQLRQLSFTIISTDNTKLKEIGPRIESLLNPLDHFYFKIITNVLTVDSTKVNKDSVTSLINLLKEKGVSDLIYNPRVTVIDNKDSVIESVIKTPIQKSSIDIQNSQSITTNQVEYQDVGLKLYISSVLITNDSVSFTLDLYIENLLDDTLTPRISSRHLKTNVYLTDTNSFLIGGINSKETIKSTKTIPFIENIPILGDITTYKSEKTSDYSFSIFITMLPSEKDIFSEFYYDPADKHLALERYLTSASRNAKGAPRSGE complement(1600833..1601957) PHAGE_Vibrio_fs1: hypothetical protein fs1p06; CCC13826_2075; phage(gi23455828) 6e-06 MLSLIIGPPRSGKTYKAVHLINDEYELHLKGESKYRFIYTNINGLKFDHFDGFVKQYDKNDFLTAVSQEYTLSSQYENGFLDNVDNYDEYALKSGIYENYHHCLIVLDEAYNTFTKTFNDSLGRFLSYHGHFGIDIIFLFQSKRQTNREYLVHTELMYMAQPSGKRLFSKLFKYKVYSTSSQVNDNLINSENLKFNQKISNLYSSGSNEIYKSYATKKILFLLAFIVFSYVVYKFLEPKHEPAQSTKQETRFVDLNASDSKNIKAISNDADKSDINTTIFNDNKIYLRITCFPSGCKFRNYAIDLSLDSFLELLSSSNCHIFLHDKKSGNYIDYFVSCNSEFERVLKGLENSSQRVCNEKSPQTDSSSMFPTHK complement(1601959..1602405) hypothetical protein; CCC13826_2074 N/A MKWLIGAVGGFIVNFIEFLVKKIGIRNTILAFIVPIYASFVAFLIAFAGYAILFIMKIWNLLREYIPKMFDYGSSVSDSFGGLSNQTVLNSAMEFLHQSGLASAFSTAMTLFISILSLFFALQLYRVILYVRANMTKIITDLLTLMSR complement(1602402..1604528) PHAGE_Spodop_MNPV: cg30; CCC13826_1299; phage(gi125860200) 9e-08 MKFLIKIFCLLGFLSSFGFSKDVWVKTDDLFGPIFPVENCEFFLGKSFFKCTNPETGTYKVFSTYVVTDYLYFNPTKSSGYFFDTNYYYFVDKVRYSGYFSYVNKYSSYLYSESDAKNGQLFTYTNITEFRVNDPLAECSANQAFNSETKQCVSCPKDHIFNNNTGKCEPELKRPDWCPKPMIYNERKVELLLRDKIVEECLPDPKIDKPTCEKMGWQFHDGCYDNLSGAEMATCMQFPEGCYAPETVNRFKAEIQLENDLFIMGGFMIPLPINAFKNGLSSFGSFLKGLFSSGAKPANLNLLEYRPQIVDVKATISGPEPVFNLNPVDDNAIVFNSVFKETGKLDTTASASSNIVKSPQATADVSPNLRKFDLPKDASISKLENNTIVTAKLKDMSKPIPTKEITVPNEVKNINLDYDLNTMFKASDKPTPNLPMTIKQTSNAGNKATYKGNIVTPDKSVIDVDVVETTNPSGSRVQDVTYSYVYRTPSGSSKFSTGYVNTIDSSNKVTNSIPKDSTSTNSSGSSSNSGIGGSSSTTTPSQPTQSIDLSSLEQALNRNSAKLDTINDTLTSIKNQQQEQWNYEPNVNTATSFSALQSELTKFDVSVNDAFNFLNNFKGDIDNLMNNFNESLDIINKGIDAPDIPKGTCPFSISGPTPGSNTKNLFEIDPCRFVAPYKSILTLFFTIWFSFEIIMFSLKYLFRVGGES 1604560..1604700 hypothetical protein; CCC13826_1298 N/A MSLLFVLRKKRSLKLRKEKFISKKLFHKRESYNVYKNRHKKERENI complement(1605082..1605303) phosphonate uptake transporter; CCC13826_2279 N/A MEKVKNFLESTKVKVAAVGSTLLSAPVLFAADAPTVPSDPLKADYALFDYVFAGVIAVAFIFMIARRVKGFIK 1605962..1606010 attR N/A GATTATTGCATAATAATTATAAAATAAATCTTAAATATTGGAATAATTT 1606017..1606253 sensory box protein; CCC13826_0185 N/A MNKREVAEFIGKDIKTIYNWEKNNPNLYKILEFYFQKESEINPKHKELIELFDKLNEKEQDFYISDIKARILKKEIGG 1606254..1606706 hypothetical protein; CCC13826_0186 N/A MKILTALSLFCIFLMANPIEIRIDKKNEQEKYIKDLNLIGDWNIETQRYFINFILTAGSNWNISFEKNHEILLDNQPREMFWKYNNEKGEISIYNKKEITIYGGDEIILKEYIGNKCFKAELNKNHQIKMCKTKGTIVNNVKDLIKIEMK 1606733..1606750 attR N/A GTCCGCCACCAACCCCAA 1606733..1606750 attR N/A GTCCGCCACCAACCCCAA complement(1606808..1607701) PHAGE_Bordet_1: integrase; CCC13826_0706; phage(gi45569541) 1e-21 MFLNVKFKYYADLYLKLGKSEWKLSTYCKNKGIVKNRLNVFFDLDIYEVKPSVIRLWLNSIQDVSNKSKKHYLNSLSMILKLALEDEIIDKNPIIHIKSIVHKTPRIEPFTSQQVNDILRLSTRYNDKFQIFLYVGFFTGMRTGEILSLKMKDIDLENRVININSTRSRFGENTPKTIYSIRTIPILDNLYNKLKRYVENYQDNIYLLQTQYNEPYRDTGVFTSDFWKPILDELNLPYRRLYNMRHTYATSMLFQNFVTPVELSKLLGHSTPKMVYDVYVNYLNSNLKDFKRDISIY 1615438..1615449 attR N/A AAAATGCCAAAT