gi|153934468|ref|NC_009698.1|  Clostridium botulinum A str. Hall, complete genome. [asmbl_id: NC_009698].3760560, gc%: 28.18%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
2896415..2896427                   attL                                                                                 N/A                 TTATATAAATAAA
complement(2901405..2902115)       PHAGE_Clostr_phiZP2: N-acetylmuramoyl-L-alanine amidase; CLC_2746; phage(gi392972694)     8e-34               MYIINPNLKFRGLSYGNNPKMIILHHAEASGCSIKDIHLWHLNNGWSGCGYNYFIKKDGAIYKGRPDNAIGAHCLSYNGVSIGICMEGRFNVEEMGADQYNSLKDLTCYLQNKYNINKIYGHRELNETECPGNNFPLHRIKKECLGGNNSIENSSNNKGSKSYPGYLLKYNPGRFDANVKLIQSKLQNIGYSVGKYGVDGYFGDGTLLAVKCFQRDCNLMIDGIIGVDTWKRIMRE
complement(2902258..2902485)       hypothetical protein; CLC_2747                                                       N/A                 MNITKYLNLVFKTTEDSTSTIKIPKVKEDVTEEEIKNCGKAIVDQNIFQSKNGDLSALKVARIVTTETEEIKIEE
complement(2902506..2902727)       hypothetical protein; CLC_2748                                                       N/A                 MAVSKNILEKNLALEYQDGLDKNGKAIMRKATYKNVKLTAEPEALMAVVDTIHPLMPEGISEARVVENYVLIK
complement(2902857..2902991)       hypothetical protein; CLC_2749                                                       N/A                 MYDGLVELISNVGFPVAVSVYLLVRVEKKLDDLIKAFNDYTKES
complement(2903093..2903623)       sigma-70 family RNA polymerase sigma factor; CLC_2750                                N/A                 MHQLIKKYREGDNKALQKIIDNFIPLILKEASKYKIKCYDYEDLVQHGYLSVIKAANMYKGEDKNFKFYCIKAIKQNYKALLKGEIKHHREIPEEKDIYPYEFTLEDEILAYEKIKEVYKALDYLTQDERNIIEGFYFKDNTIENIAKENNKSYNNIRYQKDKVIKKLQNTLKNHI
2904037..2904543                   hypothetical protein; CLC_2751                                                       N/A                 MEFKITNKLHLKLLFIALIFSIIFHNYLNTIIFNFLKKSMDISNYSITISFILLIATITIITIAHELIHGLTFTIFGGKVKYKFKFIYAATEEISNKAISLTQFTIILLAPITVISLFSLLIPNWIGNLIFISNLIGSIGDLYMSIGLIRYPYDSKIIDKPYGYYVKL
complement(2904748..2905626)       PHAGE_Geobac_E2: putative replication protein; CLC_2752; phage(gi148747766)          3e-55               MAKYRQLHTQFWSDGFVLDLTPEEKYFYLYLMSNTKTSQCGVYELPLRVIEMETGYNRETVIKLIKRFIDYKKIKYDEETKEIMIFNWVKYNVPNNINSIKCINKELKNIKNKEFIKILYLKYCELQLDIEKLFDGIFILTNEKKTLEGVNEDIGSKEGISNKVKVTNEEINTNLEDVVTFFKKNICTPKDLEYRKIKEWASRIDCDVIIMAIEEAVKYNAKNIQYIENVLYSWDERALKTKKDVENYKKQWSTNKKNNCNNTDSWSLIDQRQYDFKELERKLLGWENENVD
complement(2905703..2905942)       hypothetical protein; CLC_2753                                                       N/A                 MKRGIQIIEKNYNELPMLLEPKDLENIFSIDMRLVYEIIKLNEFPKLRISDHKIKIPKILLIKWINKNKEFLMEYRKIV
complement(2905949..2906158)       excisionase family DNA-binding protein; CLC_2754                                     N/A                 MEDYIYTVDEVASILKVNKNTVYDLIRSGNLIALKLGRLKITKATLLKFLKDFNGKDLTNLDDIKELTF
complement(2906223..2906444)       hypothetical protein; CLC_2755                                                       N/A                 MTIEEKISGLAWNKKLEILRRINNWTQEEAADKCNATQKMYWSWEKARSYPRKTSRRSIARAYRISEEDIFSN
2906661..2907212                   PHAGE_Bacill_phi105: immunity repressor; CLC_2756; phage(gi22855027)                 1e-05               MLPKKDLGKLIKKAREYKSKKTYKLFTQKMLADEIGKSRSYICDIERGRTYPSFATLSAIARACDVPLDFFQGNNDIDEVLNKFIKLQLTGLSENEITNIREALKEDDDVKIDYIYSYINSHNLNLAKGQKRIDISKNPKDIIKYILQSKTILDFYEIKKENSKKFADEVLHLIELTSYKYKK
2907252..2907264                   attR                                                                                 N/A                 TTATATAAATAAA
2907285..2908424                   PHAGE_Clostr_phiC2: putative integrase; CLC_2757; phage(gi134287379)                 7e-117              MKGGVRKRGSSWYYYFDAGTVEGKRKKIERKGGSTKKEAETALRNALNEFENCGSLLDESNISISDYFDYWHKEYALINCKYNTQVNYKKIIENHIKPNLGVYKLKSLTPAILQEFLNKKYRNGFAKNTLSNFYGVLSGALKMAVYPYKLIKENPMTYVTMPKYNQINNDKDDLKILSLENFKEIINRFPEGSNFYIPLQIAFNTGMRAAEVCGLTWDCINLKNNTITIKKIIIYKNKEWIFGTPKTKSSYRTIPIGNTLVNILKHHKKHQIKNKLKYGKHYTSSNFVCTKENGELVTTNSLKYLSRVVNYELQIPFNFHSLRHTHATMLLEAGANIKDIQQRLGHSKISTTMDTYSHVTNTLKLDSVNRFETIISKIK
complement(2908509..2909861)       PHAGE_Acanth_moumouvirus: SAM-dependent methyltransferase; CLC_2758; phage(gi441432344)     1e-34               MRKGKEYEFLIEETEFPGTGVAQKDGVPVYIKGTVPGQKVLAKVTKKRREYAQAKLLEIIENIDYAIENKCPHFGQCGGCSTQYIPYEKQLQIKEEQLLKLFKSKEIKGFDFLGVEKSPEEYEYRNKMEFTFGDMEKGGDLTLGMHVKNRNFSIVTVDNCEIVDRDFRNILTTVVNYFNEKRLPKYRVMSHEGFLRNLVIRKAKNTGEILVNIVTTSQMEFDFKEIVDMLLKVECKGEIKGILHTINDTLSDVVQVDKLEILYGRDYIIEELLGLKFKIAPEAFFQTNSKGAEKLYSIVKDFLGDASSKVVFDLYCGTGTIGQIVAPKAKKVIGVELIEEAVKAANENAKLNGLNNCEFIAGDVAKVIKDVKQKPDIIILDPPRPGVHPVALEYVVKFEPKEIIYVSCNPKTLVDDLKYLIDNGYKLEKVKGMDMFPHTPHVETVVKLSK
complement(2910148..2910594)       PHAGE_Entero_1: major capsid protein; CLC_2759; phage(gi225626393)                   3e-05               MLDKEKVKSSEEVVENIEKEKEEEKVQEVNEEKASENETDKINEFVEEEKSPKNKEEINKSAEEEINTESNNNDLNNKVSFLQCFKEGIKGTLGIFVVSIGGLAIVGLVLRYILGLYVKDIWGMLFVVYLVVSLFYPYIKAKFYKKNK

#### region 2 ####
2971780..2971791                   attL                                                                                 N/A                 AAAAGAATATCC
complement(2984271..2986433)       PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; CLC_2821; phage(gi9631364)     1e-09               MKNIFKIYNRDLQNIITNWVAIVVMLGLMILPSLYAWFNIKSSWDPYSNTKSISVAVVNKDKAAFFKGQSINVGEELVNKLKINKNIGWKFVDEKEAEKGVKYGKYYASIMIPEDFSYKILSITRDKQEKPTLIYSVNEKSNAVAPKITSKGVTTIQSEVTKTFVKTVNGIIFEMFNKLGIELEKGKPKLKDLMNMIFYVNDKIPEINASIDKLEKGAITLEEFIEKINKDIPLIKDTINSALSAGDKTKLFLSKSKEGINNVAPYIKQDLIIARKINSTAEVLIEEGVDLIGKNSSKARENLLSSKDKLTNVKEILNSILELIDIINKDKKNIIMNDFENNIKNMKERVNNKIENINTVISSIDRGEKVSVEALNRLNNKANGIDSILEKTIEDFNPKIVPAINNVLNDLIVVADNTIQLLKNANENLPGATELLDKGYTGAEKGIKGIKILKSNLPSIEKSIGEVSNKLKTLDDDERLNEIIKLMKSNAKIESDFISNPVEIKENRIYPIPNYGSAMAPFFTTLSLWVGALILVSILSVEVKDIKGAKKLKVHEKYFGRYFTFMTIAIFQALIVSLGDIYLLKVYVSNKSIFILFSIFISIIFSMIIYTLVSVFGNVGKALGVILLVLQISASGGTFPIEVTPGFFQRINPLLPFTYSVSGMREAVGGVIEGILLRDIIILLIYFTLSILLALLLKKKLEKANKNFVKKFKESGLVEE
complement(2986741..2987493)       PHAGE_Staphy_JD007: glycerophosphoryl diester phosphodiesterase; CLC_2822; phage(gi428783010)     2e-25               MKYTKILAHRGASAYAPENTMAAFKKAIEMNADGIELDVHLSKDGYIVIIHDERVDRTTDGKGEVKDFSLDELKKLDAGSWFSYEYKDEKIPTLEELLKLIKNTEIYLNIEIKAGYRLYPNIEEKVIAMIEKYKMLDRVIISSFDHYSLVRVKEINSNIKTGMLYEAALYEPWEYARSIKVEALHPNYITLTKEFIDKAYINSFEVNPYTINDETNMESLIENKITSIITNYPDRAYNIISKLKLKNLQV
complement(2987872..2988834)       PHAGE_Clostr_phiCD38_2: tail tape measure; CLC_2823; phage(gi333798123)              1e-06               MNKLKNKKAIILITIVIALLISLGLYRYNKVEAYNRVVEAANNYMEKGEYDKAIDSFKKSLNYKEDKEIDKKVKEARQLKNSQKVYNDAVNLLEDKKYEEALEKLSSIDENKDKVYILAKDKIDGCIGELINLANEEFKKENYHSANKYLDMVLKYDKDNEKALDVRNNVKTKIEEKKNNEEKLKKQQKIKTLKEKKDNEYDKDKVNNKDKERISNSKEKSKSNSNNNYISEGKARVLVESVKPSDITLNYLGIQTVPYSHITTPYKAFPQELKNKKVYVFEGVYGKSDGSYTVSQYYVDLSGEIYKDTYPSDGKCIRVK
2989295..2990548                   PHAGE_Parame_NY2A: hypothetical protein NY2A_B796L; CLC_2824; phage(gi157953100)     3e-24               MKFWRKYTHQEMDEKITKSLEKTLNYDNTKTIGIPGTKLDDTVFYDDHSFVKHSPYLRTFIQNPNHIGCHTYDKADILFGGTFDIERELIQLLAIDVLNGNDEEFDGYVTQGGTEANIQAMWVYRNYFKKERKAKHDEIAIITSADTHYSAYKGSDLLNIDIIKVPVDFYSRKIQEDTLDSIVKEAKEIGKKYFIVISNMGTTMFGSVDDPDLYANIFDKYNLEYKIHVDGAFGGFIYPINNKECKTDFSNKNVSSITLDGHKMLQAPYGTGIFVCRKNLIHNTLTKEATYIENLDVTLSGSRSGSNAVAIWMVLASYGPYGWMEKINKLRNRTKWLCKQLNDMGIKYYKEDSMNIVTIEEQYVNKEIAEKYFLVPEVHNPTNKWYKIVVMEHVELDILNSLVYDLRKFNKEHLKAM
complement(2991020..2991139)       hypothetical protein; CLC_2826                                                       N/A                 MNDLLTAALSQGLGSGLLYFYYHMYLKQQGKEKEDTRLL
complement(2991237..2991770)       hypothetical protein; CLC_2827                                                       N/A                 MYIDRPVLKFRKDEYHEKNLSIFFLAIGIFFLNITPVSASTCDGYINWEQEPNNLMSKEETNYLLPYSYCHTANKGYLPAGDIDVWNFDAIKKNYKVSFRAPEGYYYDLVIWQRFSDGHLEEVARTDSLDQVKEIDLPGRTGSDGELIKEYLVVVHSKWTTNRDADEPYTLVLLDKE
2991677..2991688                   attR                                                                                 N/A                 AAAAGAATATCC
2991987..2992139                   PHAGE_Bacill_phBC6A52: DNA integration/recombination/invertion protein; CLC_2828; phage(gi31415821)     2e-05               MLLLSQGVDFKVMQKRLGHEDINTTLNTYSHVNKTIQKNATDKLNSILDF
complement(2992617..2993351)       PHAGE_Glossi_virus: hypothetical protein SGHV062; CLC_2829; phage(gi168804078)       3e-09               MKNLDLLIKLQNCYIALENNNKVLKDGSDIYFLKKLKDRFEESKEKYKSKEEQLDNIKKEYKEISLKIKRENKNIEENEYSLYNEAKSDIKLIDRLERNIEKSKNEIKDLENLAIELIENDEKISTEKENLREELKIIKVNFDEYKKTSSKKINEAKIEIDLCEKSIRSIRAIIEMDLLEKFDKIKESKKTALVPLEKGVCTGCRVRVSSMILDKIRKEENIVYCDNCGRILYKVQEKKLKKVK