gi|147676335|ref|NC_009454.1| Pelotomaculum thermopropionicum SI chromosome, complete genome. [asmbl_id: NC_009454].3025375, gc%: 52.96% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 2233863..2233874 attL N/A AAAGCAGGCCAC 2244469..2245413 PHAGE_Thermu_45: XerD-like integrase; PTH_2135; phage(gi157265299) 6e-20 MAKKKVATVRKEVPDTWQEALQGFLFWKQAQGLAERTLTDYRKHVSQFFNRHPKAYNSKNLKSAVLEYMAQPVKPATFNLRLVNLKAFFDWCIQEGIFTDNPLAGFKRRKAEGRVVNIEEEKLARLLTLPNKETFAGLRDYALLLLTLDTGIRPKEAFSLLVDDINLRSLEVCIRSEIAKTRTTRTLPISPVTAQVIRELLQSRHPAWKNSTPVFCSSEGGKMTDLKWGDRLEVYSKQLGVWIRPYDLRHAFALQFLRNGGQPFALQRILGHTDLTMTKRYIALTQQDLREQHTVASPLNTLAPQKHRVRKIKK 2245582..2246067 hypothetical protein; PTH_2136 N/A MTLKNPIYKSIKVKPEAVRLVKEMVKAGFYRKSEAEKFDALKKLGEDICGIYRVDKVNVKTGGVVMGAFAIYQPASKTISLNNISIVSFLHELRHHLQHVGHLQASGLNAEQDAHAWSSRIFSKAVPNMFLKAVKAGRIAALQWDEASQRVVNRPDYDQIR 2246291..2246302 attL N/A TTTAGGGTAATG 2246895..2247755 PROPHAGE_Xantho_33913: IS1478 transposase; PTH_2137; phage(gi77747808) 2e-11 MYRRPTGQMVIEDFVLPFEGKLDANNRWVKLAKIIPWEQIENEYADLFPSSTGTVAKPLRMALGALIIKERCGFTDRETVEQITENPYLQYFIGLEKYQIEPPFDPSLMVHFRKRLDQKIIKKINELICQSEKHKEQKDKDPKDKDPGNPSGSGNFEVWKPEVNKGKLLLDATCAPADIRYPTDLSLLNEAREKTEKMIDTLYNQELGLARKPRTYRKRARKDYLKFARQRKPHVKAIRKAIGKQLGYLRRNLGTIDFLLKCDGHGNLSARQSRELETIRICRFSN complement(2247913..2248161) hypothetical protein; PTH_2138 N/A MRSLKDYFLFTGFSDLLPVAVKMTQELNYTKEEMIEAICKVADKARVYPPTRNRTGWFATVFREKLQEARAEILAFRNRYRD complement(2248176..2248979) type II secretory pathway, component ExeA; PTH_2139 N/A MMFTQFYGLKFNPFSKEVPFDQLFASWDLQELTSRLKYLQQVRGIGLVTGEPGCGKTSALRKYVSELNPAHYKTCYFALSTVTVLEFYQGLALALGEEPKHKKVSIFHQIQGAIASLYYERRITPVIVLDEIHLAGNKILEDLRLLFNFQMDSQNPFILILAGQTLIRSKLALNVNNPLRQRLTVKYSMRGLKAEEIREYCVSRLKYAGLHEEIFTPAAFEAIYAVTNGLPRLVNNLVTTCLICACSKKQREIDPEVVYQAQQELEI complement(2248976..2250340) PHAGE_Rhodov_RS1: integrase; PTH_2140; phage(gi472342882) 1e-13 MLDAKERENIALKKFSLIAPVLNEEKLNQQEYFRKLSDQLIDMPHYGPRRYAVKSFQWWLYLYRRYGLEGLKPGYRSDRGKSRRVTAEIAAKIRQKRAEKPGLKGILLYEELVKEGVFTPDRLSLATFYRFLAQNPDLASGKDPDEEEKDVRRFSHQRVNELWQTDIMYGPCLRVGRSKKQTYLLAFIDDASRLVTAARFCWEQNFTAVRAVFKEAILKRGVPKMIYTDNGKVYRCNQLAVVCASLGCTLLHAEPFSPSSKGKVERFFRTVRMRFLSRLEMDRVKSLEELNLLFWQWLEADYQRKIHSALGMSPLDYFLSQAQAVKMFSDPTLLDEYFLLRTTRKVNHDATFSLENILYETDQKFAGSRVEVRYEPEWLKSPARPVFLYQDGLKVGEARQVDFFANAWVKRKGRGRPAHQNDEPEELSPARGGGETTAPVISFTRLLENEGEEK complement(2250500..2251102) hypothetical protein; PTH_2141 N/A MAVLITMQQIFYTSVSPEEYYRLGKDFPFPVPDSCPNPGCLVKIAPQKHGFYRRNVVTPDFSARILIRRYHCKYCGKTISYLPSFCLPYFQYTVEVIYTALRYILVFCYSLRASLQLLKRLFWTPAHLQFYARRFFANLYHIKLGLRQLLPRVELPGENLDKREGAKKVLHIVAAGFAHIQTFSTRFYAQCGYSFLAPRT 2251324..2251926 monomeric isocitrate dehydrogenase; PTH_2142 N/A MYQTRTHRIDDRIVSISQPHVRPIVRGKARAETEFGAKVAISMVDGYAFIDHLSWDSFNESLGLKQAVEDYKKRYGHYPEAVLADQLYRTRENLSFCRKHGIRLSGPPLGRPPLDSRREKQFAHQDMRERNAVEGGFGVCKRRYGLARIMARLKETAESVIALQFLVMNLEHRLRLLFCHFICAILKTYKDQNYTVYAVI complement(2252372..2253001) hypothetical protein; PTH_2143 N/A MAEEQLMDSTLLAGIFGLIGTIIGSLIAGIYSYKGSKNAAERNIEVQNKVLTEAKELEDEKKREIIKTYAKLIYLDLLTAVFEGFQFLKGVARPNVGNAPPLLPMYHEYGKAITFISSEFNADELTLINKLYGIIEKIRHDIINLNYITNSFDLIRFNFLLLEVEVFGEKYSKIMSLDGNMITKDYLIYELHGKYKKIFDKLIELSDIR complement(2253124..2254230) PHAGE_Mycoba_Porky: gp98; PTH_2144; phage(gi194303394) 5e-53 MQRYLNTITQGDSYEVLKDLPENSVDAVVTDPPYGLSKEPDIVEVLTHWLDDQEYKHLSKGFMGKDWDSFVPSPSLWREVYRVLKPGGHVLCFAGTRTQDIMTIALRLAGFEIRDVIEWLYLTGFPKNMDVSKQFDKLAGAEQEIIGVKYKRNGTNGTNNEIFRQAPRETTYITAPVTELARKWYGWGTALKPAHEPIILARKPLEKTVCQTVEKYGTGALNIDGCLVGEARFPANCVTTGGDQWYSEYFNVTAKEISKKASKADRNSDWRGNVIDLPVKQAGSLKMRTDGSLDGYITTNRNTHPTVKPTGLMAWLCRLITPPGGLVLDPFAGSGSTAVAAIREGFNFIAIERESDYVEIAKSRTTAA complement(2254215..2254616) hypothetical protein; PTH_2145 N/A MAVKMYEGKFAPGTNYKEAFKKAAERLINQDLPLPWRIKAIDDLCEAYVEQTGEIPDSQQLTLLANHILAEELADRCPDKVTNTEYPILSEGQVKLRKRRELPRPDFNYYSYGKTFPKRATQKHRGWAGCKDI complement(2254619..2254822) hypothetical protein; PTH_2146 N/A MLIDFADSMEEANLTRRQKQVIYLVFGKDLPQKEVARLLNISQQAVSDHVNTVVNKIAQVNRLKGGW complement(2254965..2255687) PHAGE_Bacill_vB_BceM_Bc431v3: hypothetical protein; PTH_2147; phage(gi472437459) 9e-26 MNWTSSSGLITKNSRGVWNSYAAGLPRKADLGRRLAAMPKRRRIGFTMDRHTEDNIKTQGLKIALCGGMRSGKDTVAAYLCEKYGFTRFAFGDGIREVCRILYPDLVAQGKPRKLFQDIGQLLRQYDPDVWVKYVLHQMDETKPVWDNAVITDLRQPNEYTALKNKGFYIVRVNADDYVCYQRMLAAGDHFTQAEVDHVTESHHRYYRVDFDLYNNSTIGELYRQVDQMVRMLGGWTWGV complement(2255810..2256319) hypothetical protein; PTH_2148 N/A MYAYNYRMDSRSLEQFAQDIEAAAKAERDIIQRYVRHCKIKHGIEPAVEDNGCDNSGRLLSDREVNSRADFRVDGKPVEVKFNNNHLSKFHFKVDQLESYLKQGASVLWVNGYTTGKPVFTVLETVDLERIKRTHTPVAFLPWGGKLCYEIAATEFRWTTFEEGEQADG 2256420..2256431 attR N/A TTTAGGGTAATG 2256447..2256671 PHAGE_Bacill_phiAGATE: putative XRE family transcriptional regulator; PTH_2149; phage(gi448260925) 2e-11 MGLRLVIKLKDVLRERGLTQQQLAEMSGVRRPSISEFATNARTTINKEHLLAIAKALNIRDIRELIDIVDDEKG complement(2256668..2257309) PHAGE_Strept_TG1: putative ThyX; PTH_2150; phage(gi410491945) 4e-21 MRVTLIDRTPVDVLFKAAAMPYQSRPTEGLVKRVWESGHRSIARHGMASFLVEGVSQSLLKQLSRHPHVNLTVKSARYCSFEDTECVVPPSLKWQDRLEYADDYNTIMIIYEKWNRREGYTEPERREMAKLMLPLGSTTSLVISGNFQALYEFLQLRLCKRAEWEIRKMAGQMAEVLKDQVPVIFENLGCKGDELSYCPETHGACGKHPKKPA complement(2257324..2258085) PHAGE_Sulfit_pCB2047_B: hypothetical protein; PTH_2151; phage(gi472342297) 1e-08 MKSFKRLLMMLAALLIALVLYSQSAHAATVTVQPGDSVWKLGQAYGVPADVVLDANGGNALIFAGQELDVPDVYHVQPGDSLWLISRAYGTTVEAVQWLNRLNGTYIYVGQRLYIPAASPPQAGQRREPVTVNRGVSGRPNLDLMARVIQAEAGGEPYAGMVGVGAVILNRVRDSRFPNSIEGVIYQPYAFEVVSNGALWWQTPTGTSYRAAQDALSGYDPTYGALYFWNPYVAGWAGGHTVTTQIGSHVFAR complement(2258072..2258242) hypothetical protein; PTH_2152 N/A MIKPDMGYRQKYWIAFLLVIALIWLVVYHFGFYLDRDDLEHVSQLIDQGVKLLEII complement(2258239..2258847) PHAGE_Caulob_CcrColossus: putative dUTP pyrophosphatase; PTH_2153; phage(gi414088197) 8e-29 MRKVRLELGFSDGESTALTAAIPGRQTVTKVKIEGVDALKVLVKKLHPEAMIPGRGTPLSSGLDLHALDVVKAENVKKPYDTETAAFTVRAGERVLVRTGLALQMEAGIEAQVRPRSGLALKHGITVLNTPGTVDADYTGDVGIVLWNTSREPFEIRKGDRVAQLVFAPVLHNVKLVEAAELAETERGAGAYGHTGTKGGCK complement(2258934..2260829) PHAGE_Clostr_st: putative anaerobic ribonucleotide reductase-related protein; PTH_2154; phage(gi80159762) 2e-32 MKVTVTFEPGFDRLYRKFANDPVGLQLLDLDGISPRKVDVGQMSHDYFTKRLADSSVDMNANANEELSANNYQAEVTKGLLKLEGYYLLWRYSKKRFDTRRANELISAIWRGELYFHDASGHGVQVPYCFAYSTANLMVEGRPYGQLHSTPPRRSDSFVAQVIETTMDLSQEFVGAVAPGDFIVNLCWYLKREGIEPGREDGQKYIENQWQKFVHVMNNKFRVSGQSPFSNISIFDRVNLQKLFEGYRYPDGTPVDIEYVMEVQKIVAEYFAQGDPKTGLPYRFPVLTANLSVDENRRPLDPDFVDFVARTNIKLGVYNIYANEGSKIAMCCRFINDTGRMDYRADSFGNGGLNIGSHRVVTINFPRIALETESRKHFFEILDKRVKAARDLLLVHREEILRRRVERGFLKFFKPLRWFTLDMLFSTIGIHGLYEMCHFAGLRMEEEGGQAFSEEVLKVTDGYALEFSRETGHSFNTEEIPAESTAVTLAGKDRVLYGDILQPFSLYSNQYIPLIADMDAVDRVKLTGRFMKHVSGGGILHLNIQDRIQSPDTMKRLMLLALKEGVEHFAINYGFGICTQGHTSVVGTGKTCPVCGEPIEDHLTRVIGYFTKVSVKLGRHPQELRIPTATV complement(2260826..2261272) PHAGE_Clostr_phi8074_B1: putative anaerobic ribonucleoside-triphosphate reductase; PTH_2155; phage(gi431810407) 3e-10 MKVKVGGFDDLNTGDALGKVAFSIFFQGCRRRCPGCHNPELQPFEGGREIDAQEIIDRIWRNRDWYEAVVFVGGEPLEQPKALEHLLKFIRGTNIEAWLYTGYSPGEIPEPIAALCDVIVAGEYRDDLKTGGFPASSNQVIIRKERPN 2261299..2261310 attR N/A AAAGCAGGCCAC complement(2261370..2261714) holliday junction resolvase; PTH_2156 N/A MARTNYRRGYETERRIMADLAEQGFLVLRSAGSHSKIDVLGLRKDRIIAVQSKRTKLYTPSAYRKEIQAIQDLIGDYGLDEAENLDFELWVWVDHVGFRKWQITGRGVKEKEAS complement(2261714..2262616) PHAGE_Clostr_phi8074_B1: hypothetical protein; PTH_2157; phage(gi431810386) 2e-05 MGCLVNRSGARRLREEVQSQERGEVLTRAILRHFDDLHSLDLPLDFEIEKYMLEDGRLALENDTSRLNFEKIATFTPSSASKCRRELFFRACKVEPEPQAFFPFQRRWMRNGTAVHAAIQKDLLYAEKYLSNPKFKMARTDQGRPAWEKNIRQVKQFEHRGVKFQIYGMMDGVLLYVPDNSKIGLEFKTKSTTVSAVGTYKLKDAQESHRDQCTAYSLLFGLNEFLVVYESLAKDNWTKNEEARPDMRAFYVETGDYERGLLLDKFAEVAESYYNGEVPGGDPSKCIFCPYKTRCIKEAA complement(2262604..2264859) PHAGE_Clostr_phi8074_B1: putative DNA-directed DNA polymerase A; PTH_2158; phage(gi431810385) 6e-71 MELNFDGLMKTMEKAALSERGAAERVKEAQGKKARVKAATSWEDRWKQIFGMSKFKSGLDRQRAERVKAAVENGVLGMDVPPEKITGKLVSEKFRELELAEKNEKIAKLLKSKPDNYRLIQTEDQFKALLADLRHEPAFAFDTETTGVDVYQDVIVGVSLTLPRAGYHVYIPVAHNNAGPQLRRSYVLNGLKRYLTDPTVGKVLHNAKFDIHMLLRHGMRMRGLAHDTMIAMKILNENEPSVALKNLATRYGKFFGFDGESHTFEDLFGKACFADVPLDMALIYAAKDTHLTWELYKWQMEHLTKREDLLKLYRELENPLVDICVEMEQTGFAVDTAFAQEYGEELKGELAEVEKTLVAHFGEINFNSPAQLAEVLYDRLGLPQGKERSTDVKTLKGLKGRHPGIEPLLKYRELTKLLGTYVEALPHQLKADGRIHGSFNQVATVTGRFASREPNLQNLPPRARRLIVAPKGWLLLGIDFSQIEPRILAHMSGDPHFREPYLKGEDLYSTLAARVFKVPLSECGDGSKYRKMMKIGLLAVMYGTSMFTLSEQLGISVEEAHRFIEGFYDEYPDVYAFIKDTWEFVKKNEYVATLYGRKRRFPGHREQAIVYDQLAAKICKALGTERVPLDFWSNKGIPKDLKRKFGAVKGEVERVRRMAVNARIQGTAADIMKRALLNLYEYTRARGWKINGTVHDEALLLVRDTITLAEVEELEACMVRAAELEVPVKVDTEIMARWGDGVKKGEYKWVA complement(2264913..2265680) PHAGE_Bacill_SP10: phosphate starvation-inducible protein PhoH-like protein; PTH_2159; phage(gi418489577) 2e-18 MGRKKSGSRTAPAAKGEIRWKWLAERGFYVFDDEHQLAYMQALWAPVESVQAVFCEARAGTGKTTLAVLAGVYEVEAGTYDKLIYLRNTVPVREVGFLPGGVDEKQLPFMAPLVGAMEVVQPGLYGKWARPDPMKKEPPKVEALSTAFIRGLTWRRAFVILDEAQSFDLEEIQTALTRCADDCKVVVLGSLRQNDNRKIKRVHGLTPFELFMLHFKGMPLVSYCTLETNYRGWLSNHADDVMGTVEKVKETRGVV complement(2265746..2266441) hypothetical protein; PTH_2160 N/A MSVITARGKAAKESANKKGSQIDFKKVYIRLKDGDSVRVRLLSAEDYVEYKAHGDFGLGIFTQPCVEPLGQKCALCEAANAGLEKFKALYPRKRYLFAMADIDDGSVRVFDATKGQATGLIDTIEQYAEDIGETAFIFKRTGSKTETNYALNPILKLKPEDKERFAKFDGQVVEDEFFDAVLAPRTREQQIEELARAGFPVDQFFNETPAAPQEDGSKPIEDDGTDPDSVF complement(2266510..2267055) hypothetical protein; PTH_2161 N/A MYPKVRREAIRQFNKYGLKNKISLEDFESHFLECVYVEADAYKGNEPYLRCWRAKVKDKVVDLLRHHQAKSRWGYAEVPLDKSVEASGTVTQAGNLIPDHQTAFEDDVVFETDIKKLLAGYQATANERYAKVIEMVNQGRTNREIAREFGADEYTPAVRKLVQRAKQDFRKYYDKHFAQAC 2267575..2267988 PHAGE_Strept_PH15: putative transcriptional repressor; PTH_2162; phage(gi190151419) 6e-07 MRVKGITAKEKAEQLLRQAEAGEYLLQLRSKKGVSLAQLGEKVGVSANYLSEIERGLKVPSDLLIRELAGYYGTDENIIFKKYGKTPLAAIEEVNDNPTLQKTLTEIRRNKKLTDDQKQELYDKVYELYQEFINKGV 2267995..2268432 hypothetical protein; PTH_2163 N/A MFKLMESLLTCYERAVGYRIAAITENIAVLLSGFILGAIITLFVLSSVIVNFKRNIGPLKKIEMGNISVIRLKNEGKETILINPDNIPELMDNLIDLALLKLFPNKMIFLKNRRRANRIVWVAIGLALLFSLFGIGLAFHVIEGN complement(2268478..2269425) PHAGE_Clostr_phi8074_B1: hypothetical protein; PTH_2164; phage(gi431810408) 2e-14 MVIIRGREVDVDVTRELEKYDWRRPRWTGDKLHACSPFRHERHPSFAVRLDNGVWIDSGSDDEGWRKGNIIKLLAFLRNETYQETADYLLEEYGPFAGDPDHLRLTYDLTPRTAPVSLDPAVLDEFKYRHPYLTERRGIEEKWQRAFRVGYDRKHRAVTFPWYDRQGRLVNVKFRSVTDKRFWFYGDGQPVGDHVYALNFIYKAGKRLAYVVESEIDAITLWQAGFPAVALGGANLSPRQRELIIQSPLECLVVATDNDKAGRRIARTIAGQLGGFKAVQAIDLPGHVKDVNDLTREELLEVAARTRAMPFNFAA complement(2269448..2270698) PHAGE_Clostr_phi8074_B1: putative DNA helicase; PTH_2165; phage(gi431810401) 8e-16 MIESQLLSKVIDEKDFYVLRRYKVDVADFPTLGEVYGFIQDYVQENNATPDYRTVVAEFPNFEYIPEVTDTFKYLCRKLKAQTAKVRAFELLQNRAVRKFNELPGDQFVAWLKEETAKIEAATAPPPDGTNYATNGPERLQWYKESKEKMSRQFIPTPYPTLTAALGGGFEAGDYILLMAFTNRGKSWLASHIGLAAWQNGFGVLHYSPELSKRQQALRLDTLMGHFDNVKLRRGSLDNEREYLDFLKGFENLPTPYFIKTMEDLPNGLSLEVIEADLQARPEVKMVIVDGFNLMAHGKGARVRDSMTQTSRRLRQLFGRYGVAGLVVHQTPGASEKDSHKDDGETRLVKPPKLTDYSETVAVIQDAATALTFDQAQGVGRLSIEKAREPNVGLVIELNCDFNYGVIRESDVTDIF complement(2270698..2271468) PHAGE_Clostr_phi8074_B1: hypothetical protein; PTH_2166; phage(gi431810400) 2e-06 MEVLKDKCLLAHKCKKAGNPEHCNILCFPFKKIQGQTGTGGLWGLADVPKTIAHVRADRLPFAKENPAAYKVITGYCSDVTTYVDAGKGLYLYSIPNKDNPKGTGTGKTTAAVAIVNEYLVARVIQHVKKERPIEVVPALFVSVPKFQNVFNKQFRGPKDLQEEASLQYYTLKDNMIAAELLVLDDIGVRESTQAFNGEFYEVIDERATGEKATIFTSNESLGVIAAIYDDRTASRIEGSTLPVAFVGKDHRRGVL