gi|124262546|ref|NC_008826.1| Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence. [asmbl_id: NC_008826].599444, gc%: 65.98% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 54291..55664 PHAGE_Cronob_vB_CsaM_GAP32: long tail fiber proximal subunit; Mpe_B0064; phage(gi414087138) 2e-09 MKRTFRLEQLQRGFTIIELLVVLSIMAMAAIVGAQRLLEKFKESQADLAADDISVVGKAVAAYIPANVATLSLNPTTDITIATLQAGAMLPANYSSGNPWGAGYSIRVKRLGAAPGPYQYEALVITNSRWRIGTVDQIALLGRAVRRIGGPGGLTYDATGAVGNGGAWTALVVDYPNANQAGRLAYFVSQATTPFDSIYLRLDGGNAMTGNLNMNSNGIVAATSVNASGTAMPWQVSAAGGFTGTTATATGVVNAGSVTTTGAMTAGTTVTATGNITSSADVRGATLTSDSDIAMGPGGTVSSSGAINIQPNGALTLSASGGTTVAGSGALTVNDTVTAANDVVISSLPSRAAGFSPSTGSLKALAPKLVEMQNYIITANGQTVPRPTCISGGTPNAFILPHVAQGKVDSARWGTQVRLTGAGPWTVVALDGAGLSIPSVNIPATDFAAIVRTFCTY 55682..56314 PHAGE_Megavi_chiliensis: putative ankyrin repeat protein; Mpe_B0065; phage(gi363540612) 9e-10 MSLKLVSAEAQRAALLWLVGSRAPVPLLCAVIPRLGDLTGVNTDGNSVSEVLVGLNDERVMAALLRSRWSASSQAISGWTAPTVAVDRNALRSLELMLRSGVSPDLRNGNQTTALMIAARQNNLEAMKHLLRAGAKPDLADRQGFTAAHWAVHKDRPLTLKVLSMLRRHGADLLTVDVHGRTCFELASSYAAELQRLGAAVRAEQLAAAG 56370..57209 ParB, partition protein; Mpe_B0066 N/A MHFSDDAQALTEENRALKEAEGRGKAIPLDFLDDSPYHIGELEPERVKALEDNLKHNPQSSPVVVRLKADGRYELLAGRHRVRALRNLGRTEVEAVIKAVDDQQALRIVVYDNHITPNLSDYQKYLGFERIRQERELTVTELAEESGVSLPVLQKIMLFTKLPPAAQEVIRASHRSFGANLFAGLAPLVDDYSDQVTEAVKLVAAGKLKQGAAVAWVTKPGTENAPEPVSVAVMSGKRRYAEIRVKKAGRLEIDFVRAEDASGIVKKLQEFLQQAAKAS complement(57517..57909) hypothetical protein; Mpe_B0067 N/A MRRLATNPHDLMRFQTTGQLPSGTKPAGPLVELLDAIGARDRISIRGVVVDARMGYQGSRTFATAQQAFLWVHPSSEVFGSFPADSWRIKTFDRRLTIEDLKECCNSMPESVLAAYPRLRRPAAKPSSLR complement(57934..58383) hypothetical protein; Mpe_B0068 N/A MLALRAEAYRHFWHRKQGDPKPVFFGLEFDPLTPGQVVSGRIIRTDDALLQSARCAFPDPEPGTDVREAQLAAVQAQARHLLALEASAFTLIGHARQALTWTTGEAAQRRTVECVAVRLVSVDRSVGSIFPRRPGEDRPRLTYSPPSYT complement(58486..61326) PROPHAGE_Xantho_33913: Tn5041 transposase; Mpe_B0069; phage(gi21231545) 4e-19 MLRATGFRGKVKLIARRRGDGLRLGLALHIGFVRMTGRPLNSVRVVPSVLLAHLGRELGIETPDLASVRALYARGRTLFDHQQLACESLGFGWMTEHQRRALVRVLRDEVAQCADRERLIVHARQWLYSHRLLVLRERDIRGLVAAALSELERTTAEAVRQSVPVSTLKRWSAVLDAPRPDGQPCQSWLWSAPAKHSTRQIAEVLERITCLKELGVDRALAEINNVLVRRYARRMASRAPSVNARVKEPARTVETACFLRYCLLTATDQFILMFQRRVADLWRQCADDAVAPIDWSRQYQLLLQELAELARDEAGTAELRTRLLELVAARRAQRTPSRASGIRRQLIAAIAPVRSLLVAAGSLSWTATGEHPALQALDILRAQYAAGDKTLPVDVTAARLGAAWRQDIADTDRERAFRALEVATLFALRRGLRNGSIWIEHSLSFRGRERLFIPDERWEVEARRHYARLQMPAKAANYLAPLLERVRAGVDAVATAVRTGALRVDDELHLAPLAADDEDPEVSRLRSRLDQRIGEVQLPEVILAVDAQVRFSWIMLAREPRSGQELLMVYAGILAHGTSLTAAECARMIPQLSATSIRQAMRWAGDERRLALACQAVLEHMQRQPIAATWGRADLASSDMMSLETSRRVWQARQDPRRQTASIGIYSHVKDRWGIFHAQPIVLNERQAGAAIEGVVRQEKVETTQLAVDTHGYTDFAMGLARLLGFDLCPRLRELNQRHLFVPRGMKVPEEIAAVCEATIDTALIETHWDSLVHLAASVITGHASAVTALARFGSAARGDPIYDAGVQLGKLLRTAFLADYFVNEAFRRELRRVLNRGEAVNALKRAIYTGRVGPAQARRADEMQAVADALSLLANIVMAWNTAQMQVVLDRWANRRQIVPAELTGRIAPTRLEGINLRGVFRFPLERYAGQILPSQTAVKTGAAG complement(61332..62207) PROPHAGE_Escher_CFT073: transposase insF; Mpe_B0070; phage(gi26249410) 7e-60 MKESWPVSLSCEVLGVSVSGYFEHQRRQYRRQPSRPGSGRLSDEALLAHVRAIHAEVRQEYGWPRMTKELCARGHRVGKERVRRLMQQHGIKARGRRKFVVTTDSKHNLPIAPDLLQRDFAADGPNAKWTSDITYIATDEGWLYLAAFIDLHSRMIVGWSMQPHMRASLVTDALRMAWFRRRPPPGLIVHTDRGSQYCSDEFQKALTGYGMRSSMSRKGDCWDNAPTESLWGRLKVGRLHGRKFATRRQAMDEVIDWMAFYNHRRLHSSLGYLSPRQYEERWVAAQLNKAA complement(62204..62524) PHAGE_Entero_Sf6: gene 56 protein; Mpe_B0071; phage(gi41057344) 4e-09 MNDKQVRGKYTQEFKLEAVRLVRAGQSVGMTAKVLGIPKASLSNWVRSSEQGQLGGAGDRPVTPEQMELARLRAELARVKMERDIAKKAAAYFAQDVLQSTPGSGR 63062..64645 PHAGE_Ectoca_1: EsV-1-65; Mpe_B0072; phage(gi13242537) 3e-36 MKSRFLATMSHEIRTPLNGVVGAAELLQKNGLSEREKAQMVSLLTQSSRALMALINDILDWSKLDVGKVMIERHPINLRALVFESNELFAAQAANKDIELTSSCNPDVPRTLHGDPTRIRQIVNNLVSNAVKFTERGGVHIHLSIDGIDPSERHQEGDPRTVRIEVSDTGIGISPEKLGKLFKAFSQGDVSVTRNFGGTGLGLVISQELANLMGGRIEVSSTPGVGSVFTALLPMIATDQVASTGVPRARPDIILAATNVGLRRHIRSLLSDLRIDPTTVGHIPDESELSECRLLLVDAPMLAGITNLSACLDRHSAAGRRVAVLTPLNCDAVVGVLPEAVLLYKPVRLTSIRALVDAVDGVSTSTGEQRTGSDGAQSTPPLRGLRVLIAEDNQVNQVVFQAMLAQAEADCSIARNGQEALDALAEHKFDVVLMDVQMPVLDGISAVRELRARESSNPGSGRTTVVAMTANTEPQDIAQCRSAGMDDFLPKPFSIGQLTSVLARHAHRSPAAAGQALATGAAASTLK #### region 2 #### 241995..242420 PHAGE_Iodoba_phiPLPE: hypothetical protein phiPLPE_11; Mpe_B0290; phage(gi197085625) 1e-14 MPNVTDRMSAADYLAMIQARAGGAAPTKRKNKFGNRRGLEFDGEKYDSSKELKHHQMLKLARTAADPRDRVVRIERQVPYVLLDKQEGERAVRYYADFVVEYADGRTEVHDTKSPPTRADKTYVIKRKLMLSRHGIRIQEF complement(242431..242919) PHAGE_Entero_4795: putative repressor protein CI; Mpe_B0291; phage(gi157166008) 9e-05 MQRIGRIVKTLNVGVNPSCEDSSHKISVKYFHNTPASVSSDPHTIRRQNALSLFQQFAEERIAAGEQPKGLEIAFAEKLGISGATWSMAKSGSRPIGDKLARQFEHRCALPAGWMDEERAPQGLSQAEQQFLASALEAYRGTNSDGRKQLRQLIKTWNQRTR 243368..243443 tRNA N/A GCGGACGTGGCGCAGTTGGTAGCGCGCGAACTTGCCAAGTTCGAGGCCACGGGTTCGAGACCCGTCGTCCGCTCCA 243581..243658 tRNA N/A GCCCTTGTAGCTCAGCCGGAAGAAGCACCGACCTAGTAAGTCGGGGGTCGCGCGTTCGAATCGTCGCCGAGGGCACCA 243665..243740 tRNA N/A TGCGGGGTGGGAAAGTTGGCAATCCGCTGGCCTCATAAGCCAGAGATCGAGCGTTCGAGTCGCTCCCTCGCAACCA 243845..243920 tRNA N/A GCCCCGTTAACTCAGAGGCCAGAGTGCCGTCCTGTCCAGACGGAAGCCGCGGATTCGAATTCCGCACGGGGCGCCA 244001..244076 tRNA N/A GCCGCGGTAGCTCAGTCGGTAGAGCGTTCGCCTGAAGAGCGAAGCGTCGAAGGTTCGATCCCTTCCTGCGGCACCA 244155..244242 tRNA N/A CCCCGCGTGGCGGAATTCAGGTAGACGCGCTCGGCTCAGAACCGAGTGCCCATCGGGCGTGTCCGTTCGACTCGGACCGTGGGGACCA 244249..244340 tRNA N/A GGATGGTTGGCCGAGTGGTCTAAGGCACCTGTCTCGAAAACAGGAGAGGGCGAGAGTCCTCCGCGGGTTCGAATCCTTCGCACCATCCTCCA 244348..244424 tRNA N/A ACCTCGTTAGCTCAGCGCGGAAGAGCACCCGGCTACGAACCGGGAGGCCACACGTTCGACCCGTGTACGAGGTGCCA 244454..244615 hypothetical protein; Mpe_B0292 N/A MKKSIVQRIATLKPRNVFAPLAGRRAAGAHASRKRHADVQRKDLVQRLREAGM 244622..244708 tRNA N/A GGATGGTTGGCAGAGTGGCTGATCGCGCCTGGCTGTAACCCAGGTTCCCCAAAGGACGCGGAGGTTCGAATCCTTCACCATCCACCA 245063..245138 tRNA N/A GGGGGTGTAGTTCAGTTGGCAGAACACCCGCTTTGCAAGCGGGATGTCGCAGGTTCGATGCCTGTCACCTCCACCA 245146..245221 tRNA N/A ACCGGGTTAGCTCAATTGGCAGAGCGGCGGCCTCCAAAGCCGAAGGTTTGCGGTTCGACTCCGTAACTCGGTGCCA 245239..245325 tRNA N/A CTCGACGTAGCCAAGTTGGCCGAAGGCACCTGGTTGCAACCCAGGCGGCGAAAGCCCGCATCCGTTCGAATCGGATCGTCGAGTCCA 245347..245892 PHAGE_Salmon_SSU5: putative guanosine polyphosphate pyrophospho hydrolase/synthetase; Mpe_B0293; phage(gi410491509) 5e-21 MHVFSSPGARAAFRFADIAHAGQLRRYVMRPYIEHPVAVARLVERFDHDEAMVMAALLHDTKEDCGVSVALLEHEFGGEVAGLVDDLSDVSTPADGNRASRKAVDRAHTARARPKAKTIKALDLVHNTPSIVANDTAFSLVYLPEKALLLDVLGDASDCRAVHLARRVHARACARLGISPR 245883..245958 tRNA N/A GCCTCGTTAGCTCAGCGGACAGAGCGGCCCGTTCCTAGCGGGTAGGTCGGCTGTTCGATCCAGCCACGAGGCACCA 245968..246044 tRNA N/A GCGTCCGTAGCTCAGGTGGACAGAGCGCGGCTTTCCGAAGGCCGAGGCCGGCGATTCGACTTCGTCCGGACGCACCA 246053..246128 tRNA N/A TCCCCGGTAGCGCAGCTGGTAGCGCGCCTGGCTGTTAACCAGGAGGTCCTTGGTTCGAGACCAAGTCGGGGAGCCA 246151..246699 PHAGE_Caulob_CcrColossus: putative oxoglutarate oxygenase domain protein; Mpe_B0294; phage(gi414088285) 4e-36 MKAPVTYEAGFVADPASLFNTLWSELDWERRGSTPRREFYCNDVAVPYTYGSGAGVREYLPKEWHPALSAVKAAVESRVGAAMEVCFLNGYEDARDHLGWHADDSPEMDDERPIAIVTVGAEREIWFRPNSDTLSVEKLLLESGSLCVMKPGMQDTHMHRIPKAGFICGPRISMTFRGYVRT 246727..246803 tRNA N/A GGCCGCTTAGCTCAGCCTGGTAGAGCACCGTCTTGATAAGGCGGGGGTCGTTGGATCGAAGCCAACAGCGGCTACCA 246815..246892 tRNA N/A CGGCGTGTAGGAAAGCCAGGTCAATCCGCCTGCTTCGGGAGCAGGAGAACGCGGGATCGAAGCCCGCCACGCCGACCA 246909..246984 tRNA N/A CTCGGTGTAGCGCAGCTGGTAGCGCATCGCGTTTGGGACGCGAGGGTCGCAGGTTCGAGCCCTGTCACCGAGACCA 246994..247070 tRNA N/A CGGGATGTAGCGCAGCCAGGCAGCGCGCCTGCTCGGGGAGCAGGAGGCCGCGGGATCGAAGCCCGCCATCCCGACCA 247084..247159 tRNA N/A GTGCAGGTAGCTTAGTTGGCAAAGCCCCAGGATGTGACCCTGGTAGTCGGCGGTTCGAGGCCGCTTCTGCACCCCA 247170..247254 tRNA N/A GCCCAGCTGGCGGAACTGGTAGACGCAGTCGCCTCAAAAGCGGCCGCCGCAAGGCGTGAGGGCTCGACTCCCTCGCTGGGCACCA 247475..247566 tRNA N/A GGAGAGCTGCCCGAGCGGCAAGGGGGCGGCTTGCTAAGCCGATGCCGGTGCTGAGAAGCGCCGCGCGCGTTCGATCCGCGCGCTCTCCGCCA 247610..247686 tRNA N/A GTCTCGTTCGTCTAGTGGTCCAGGACACCGGGCTTTCACCTCGGAGATCGCGGGTTCGAACCCCGCACGAGACGCCA 247699..247774 tRNA N/A GCGGTTGTAGCTCAAGGGGGTAGAGCAGCCGGCTCTTAACCGGCAGGCCAGGGTTCGATGCCCTGCGACCGCACCA 247832..247907 tRNA N/A TGGCGCGTAGTCGAGTGGCCTCAGACAGCCGGCTTTGACCCGGTGTACGCAGGTTCGAATCCTGCCGCGCCTGCCA 247914..247988 tRNA N/A AGTCCCCTAGCTCAGAGGCAGAGCAGCGCTTTCACACGGCGAAGGTCGAGATTTCGAAACTCTCGGGGACTACCA 247996..248080 tRNA N/A CTCCGTCTGGCGAAATCGGTAGACGCGCGAGGTCGAGAGCCTCGTGCCGCAAGGCGTGCAGGTTCGAGGCCTGCGACGGAGACCA 248151..248714 PHAGE_Prochl_P_SSP3: hypothetical protein; Mpe_B0295; phage(gi472343189) 1e-06 MHHDVLQLDINGTPQAWISPQAAALHYATDSVAWFDGDGPLTTLRGGINMATGRQSLIEVHPIIALRGSAKVNLFDIEPAFARDKLMRRDRFTCAYCGDTFPDRDLTVDHILPQSRGGRDGWMECVASCSACNFRKADRTPEEAGMPLLYLPYVPSLFETFLLEGRRIRADVHEWLASRLPKGSRLC complement(248775..249425) PHAGE_Halovi_HVTV_1: Hef nuclease; Mpe_B0296; phage(gi443404613) 2e-06 MPESKSITIVADSRETVGGIPARLAQMPGVVVESAQLDSGDFIVAPGVVVERKRNHDFAASILDGRLMPQVKLMKAEFEKVVVLIEGDVHNTSSRIADAALHGAISWLAMLEGVSLIYARDAADSAGLVATMARHLQHGLGYEISLRSGKPKDLRTLQQFLVEGLPGVGPGRAQAIIAHFGSVHAALVATEQELAGVPGLGAKTAKKVHEVLHAAW