gi|118467340|ref|NC_008596.1|  Mycobacterium smegmatis str. MC2 155, complete genome. [asmbl_id: NC_008596].6988209, gc%: 67.40%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1942190..1943023)       PROPHAGE_Xantho_33913: IS1404 transposase; MSMEG_1866; phage(gi21232569)             7e-35               MLTTTMGMSERLACKAVGLARSTCRRLPLAETPADPDAEMRGWLRSYATKHPCHGFRRAWAALRYDERREVNKKKIHRLWREEGLQVRVHSPRKRAGVSSIPPIEADAPNVVWAIDFQFDSTIDGKAIKIASMIDEHTRVSLLNIVERSITADRLVEELKKVFVAAGGPPRVLRMDNGPEFISQALQQFCDGRIGMSYIPPGTPWNNGHIESFNNRLRKECLNRNHWNTLLEARVVIGDFKDEHNHRHRHSALGYRTPAEYAAVCSCTHTPVACSIN
complement(1943053..1943334)       PROPHAGE_Xantho_33913: IS1477 transposase; MSMEG_1867; phage(gi21231080)             1e-12               MAGRKRHSAEDIVRKLRRADELTAEGKTGEEIAAELEVSPATLYNWRRSYGGMDTDAAKELKELREQNARLKRLLAEAELVKDALREVAKGKF
complement(1943545..1943838)       hypothetical protein; MSMEG_1868                                                     N/A                 MTGIDIDASEALTLYLKHYPGKNDTEFDAFYGTQSAQAARALVRELLDEAMSLRPDWSHMTLNDAGDFVEAEMHARHPELSPKALECIGNYYTYLMR
complement(1943875..1944624)       hypothetical protein; MSMEG_1869                                                     N/A                 MIDKDQRARIFSSAAQDTGDGRARLELFRALDGVTLYYVATEREIDGNRVLSTRLRKLDDDSSAMVVYTSRRHPDLPDRFVASQWSNILKAAYETVRPDWLVVANMRNETVAIPRVQFPVILADLSTPEADRTPNPLVVADDLERVISDAAEMTSDGWYGSAITHLRGRELYLHLKDGANAGQPDIVTSSAAGRAGWVLTYTTRNRPGISYGGITWDALVNMIKSNPDIPGVRVVNEADDWILLGRDVI
complement(1944699..1948496)       PHAGE_Emilia_86: hypothetical protein EhV204; MSMEG_1870; phage(gi73852674)          5e-23               MPSNSGGGGGVSGIRIEVDPQVLIRAGESMLSLGNQLDMLMGALGPMLSSGIASGIDLAGLAMALDYGDLTQKFSNTLANGANTFKTVGLRLQASGHNYANADAVSTIGGGAPTGGVKGKFDETKPVDARDSPSLSVVPPPPAWYLVGSFLGPTAWPSGNPAMLRLTAAQWENLATGFSAVSNQVSGSSTAVSTQKIPEASQIAQAHADLADGVADLANQATNLAETLNTFADNVQETQDAIRRLLDRVASIDGIINTVKGIFTGDALDIIKEVVEDIRTLLGNFQRQVKAVGALLEELKNALNDTVTKFQKWADKNLREILGDQVGGAISDIIKFQTDLSTGVLNGVINTVAGTVAFADFDTWKGLGETALAVIKDPSLIDDIGIAAGKEFFAWDQLTGENPGRGIGEAGFNIAGLFVGGPLSKGGTVAKGVNKVRRAFDHADSPPLDLPGRHGLDGNDLSVTGSRVPEVPEIRQDGIPDSVINPAPSNRLDAPSNPGGPEAPVRPPEPPGPTTHNPGGTRPPGGGDGPPPESPHRPVGPADPGPTRGDAPPPHTPSTPEPSHPGSSSVGEPGIRGNPEPSHTPPSVDHTPQHAPEPATPAAQNDAPHTSAESNSTPTHQPSTSDAPASTHSPTQHIGGSVGGEHSAISSDSNIGSAEHHRPVTDESRNWADEQAHRPAEQQPAHNAAAEQPVTHDRNSAETNESREPAYSSAVNGPQPAMGPMMSPGVGSGPGSPMTPHAPGPVHGGGESPSPAAKLPTPDTSTRGPETRPSHTGSPETPRAQQPSAVGPTPGSTPSAPVHSSADQSRQSASTSPASSTSEQTAPKEHGTAPGSSVPPSDSHHNSPPPKPEPPHDSSGLEPPVHDGDAFTDPAKSDLDYNPMLDENGHYVPGSLPSYDELLRLTRTEPDSAHYWSGRDANGVGVGPDGSGIAERIAEGSNGTTLEMTLERNGVHPLPAWNRHDPESVRFWEDASAAYAENARGDVTAIVGSDLRPGNIWQTVEIPRLMDNPNVTRIVQIDPDTGRATELFHRTTSADGPAPNGQMEPTARHDGLTSETDSRTLRDTDQDSIDRASNKPDADVRAEPSHSWRDDTDQQRGDDRGYSDDDGPRENAVGPDGRYKISGHGDYHSGDGTFTVPADTSVTVYGEHGSPITQSLGNLIESGGDTSRVFKKTYYPGETMPNYTLLPPDDMNIVGTPHTVDRATTLSDLLQPNMGAVDFVACLGSWNHRVFDVHGIYHQDTYDFIEKYPWPEPENLGDDDW
complement(1948496..1948774)       hypothetical protein; MSMEG_1871                                                     N/A                 MVDFGQMQDAIAHMASYEREVTSCLEDIDRTMASLRQSWHGEASDAQAHAQAQWREGAEQMREALSQLQKIAQTARSNYSDAVTKNSEMWDD
complement(1948794..1949663)       PHAGE_Bovine_1: transcriptional regulator ICP4; MSMEG_1872; phage(gi9629891)         5e-07               MGQSLEVVTSELRSASAALADAGQRLQDGLSAVDLSVDQLLGSGWKGGAGSAYSEQWDKWHNGAGQVIRGLQAMSESLKASADSYSATDQQAAGAVGSSFQPGGGSPAGSAGASSASPAAATSAQQASSAQMDGGTEDLAAMMGLGEPAAQLGGQLAEGAAQAAGQLTGGLTQAATAITQGVTGIVQAAQSESGAGATPVETGSTTAADPLVPVDEATPDTEDEHTDERDETERQSDEQEAETLEANGAGGGAGTDSSSVSAPGEMAPPSPSPPTTGNSMRFGRLNDAQ
1949753..1950385                   PHAGE_Emilia_86: putative thymidylate kinase; MSMEG_1873; phage(gi73852905)          1e-08               MLIAIEGVDGAGKRTLTNGLRAAFETNHKSVASLAFPRYHQSVPADLAAEALRGSHGDLAESVYAMATLFALDRAGAREQIEHLQAAYDVVILDRYVASNAAYSAARLHQGVDGEVVTWVHELEFGRLHLPVPDWQVLLNVPTELAAQRAEHRANTEADRAKDAYERDDGLQRRTGEVYAALAAADWGGRWAIAGPDVDATALADRLSSG
1950437..1951123                   PHAGE_Feldma_virus: putative sensor histidine kinase; MSMEG_1874; phage(gi197322366)     2e-07               MDTMRQRILVVDDDPSLAEMLTIVLRGEGFDTAVIGDGSQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYVMKPFKPKELVARVRARLRRNEDEPAEMLSIGDVEIDVPAHKVTRQGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPQVVLTVRGVGYKAGPP
1951266..1952852                   PHAGE_Ectoca_1: EsV-1-65; MSMEG_1875; phage(gi13242537)                              1e-13               MGRALSLVWRRSLQLRVVTLTLGLSLAVILVLGFVLTSQITDRILEVKVKAATEEVERARNTVSGIVGGEESRSLESSLQLARNTLVDRKADVRADMAGAFDAVLVVPGDGPRAAAAAGPVAQIPEALRDFVKAGQVSYQYATVQTEGFSGPALIVGSPTTSSVPNLELYLIFPLNNEESTIALVRGTMATGGVVLLGLLAAIALVVARQIVQPVRSASRIAERFAEGHLTERMPVRGEDDMARLAVSFNDMAESLSRQIQQLEEFGNLQRRFTSDVSHELRTPLTTVRMAADLIYDHSEDLDPALRRSTELMVNELDRFETLLADLLEISRHDAGVAELSVESLDLRSTVRSALDNVGHLAADAGVELTLDMPEEDVIAEVDPRRVERILRNLIANAIDHAESKPVQIRMAADEDTVAVTVRDFGVGLRPGEEKLVFSRFWRSDPSRVRRSGGTGLGLAISIEDARLHQGRLEAWGEPGKGACFRLTLPLVRGHKVTTSPLPLKPASEQRPARRRSNKDREAAEESV

#### region 2 ####
3499988..3501115                   PHAGE_Entero_Sf6: gene 15 protein; MSMEG_3429; phage(gi41057293)                     8e-12               MMSLADVFDRRRNALTLWRLFLAIGVVFWHSWPLTGREIGFVPAVRLLSDMFADGFFIISGFLITAAWFRRPYLKEYWASRGLRIFPGLWVCVVLIAFVAAPIAAKATNTTITLSSEIWYVVNNAVLNIAYANIDGTPTDVPYPGIWNGSIWTLFFVLLCDLMVSVLGFVGLLKRRWTIPTLFVAAVCWCAYVSYTPPGYSMAQMLARFAVVFLAGAMFYQYQHKIPANWWLVALGAGIVVASSFTQNYRLIGALPLAYAIIVSGVLVKRSRLTNDLSYGVYIYAFPVQQLLATFGLAALNPFLFFGLSTAAVMPIAAGSWFLVEKRASNLKSRIFRKSKKAAEPSKRPEPAVATGTVEASTRTAESPAIPGEHS
3501227..3501832                   PHAGE_Invert_6: 235L; MSMEG_3430; phage(gi15078947)                                  8e-05               MVEQSLWMQKVAADPGHSQWYIERFRSLARAGEDLFGEARLVDAMAPRNAHILDAGCGPGRLGGYLAGVGHRVVGVDVDPALIAAAEEDYPGPRWLVGDLAELDLPARGIAEPFDIIVSAGNVMTFLAPSTRAQVLSRLRAHLTDNGRAVIGFGAGRDYGFEEFLADAKGAGFTPDQLLSTWDVRPFSEDSDFLVAILRRA
complement(3501834..3502136)       PHAGE_Acanth_moumouvirus: glucose-methanol-choline oxidoreductase; MSMEG_3431; phage(gi441432558)     1e-06               MRRPVMPGDLAGRDLDEFLRNAGGSFWHQVGTAKMGRGPMSVVDAHLKVHGLDGLRVADGSVLPRLTTGNTMAPCVVIGELASQALIAEHRGSVPRPVTA
3502304..3503770                   IS1549, transposase; MSMEG_3433                                                      N/A                 MQIVWSTRRGSRNIEHVGSAHDEAELAALKASAAERLAANQAVLDLEVSPPAGSEPLPITSSQMTHLWDGLCSAYRILGFDSAAEGDNVFRDLVLARIIEPSSKADAGRVLTEVGVEPASYATVKRRLPIYAQPQWRQSLAAASARRAGLGPASLVLFDVSTLYFETDAGDGFREPGFSKERRLEPQITLGLLTDAAGFPLTVEAFEGNRAETATMLPVINAFKAAHQLTDVTVVADAGMISEANQVALQSAGLSYILGAKIPFLPDVVREWRDKHPDEAIPDGLVLTQPWPATSSEKARGIPDRVIHYQFRHDRARRTLRGIDEQVAKAQRAVDGHAPVKRNRYIQLTGATKSVNRTLEAKTRALAGWKGYTTNLVGQPASFVIDAYHQLWHIEKAFRMSKHDLQARPIYHHLRESIEAHLSIVVAAMAVSHFIETQTGWSIKKFVRTARRYRTVKIKAGTQTLTAADPLPEDLRAVLIKIRADGAH
complement(3503726..3505195)       PHAGE_Acanth_moumouvirus: glucose-methanol-choline oxidoreductase; MSMEG_3432; phage(gi441432558)     2e-24               MKTTDTSDLARTRNLLSRLEAGDRVDYDFIVCGAGTTGSVVARRLAEGLGASVLLLEAGGDDDVESIMDPQRWPANLGTERDWGFVAEENVHLNNRALPMSMGKVLGGGSSINVMCWARGHKADWNFFAAEAGDPAWGYDNVLEIYRSVENWTGTPDPVRRGTRGPIHVEPIPDPQPCAVATIEAAKSLGLPAYDSPNGAMMEGPGGAAMLEVLTKDGRRQSIYRAYVVPVLGRVDLTVLTGAVVQRIVVVGRRATAVEVKIAGTVHEITARSEVIVSLGAINTPKVLLQSGIGDERQLRYFGIPVNAHLPGVGRNLQDHLAFPVEWEFPPGWGPDARGQACIYWSSESGLAAPDQYACFTGIPFGTPETAERFPLPASAWFLYGTVARPQSRGTVTLTGSHPCDPVQVHANSLAHPEDVAKSRQCVEFLREFGNAAELRPYVRRPVMPGDLAGRDLDEFLRNAGGSFWHPTWLKLVCTVGADLDEDCS
3505505..3506134                   PHAGE_Equid_8: envelope glycoprotein J; MSMEG_3434; phage(gi386522795)               2e-07               MSSSVAIAACAASLAMTLAACGSDSDTASSSTSPAGSSTVAELVTSSSTETAAPAASTCPTAAPQDAAAPEWTLSGATGSVEVTGSTDAAAPVINVNGPFSVTETQVKTLQPGEGPVVADNATVLVCYMGVNGRDGTVFDSSYERGAPVDFPLNGVVAGFQKAIAGQTVGSTVAVAMTSEDGYPNGQPAAGIEPGDSLIFAIKILDAAS
3506198..3506590                   hypothetical protein; MSMEG_3435                                                     N/A                 MTETADRVTRFAADLVESAAAEGARQSRSAKQQLDHWARVGRAVSSQHTAARRRVEAALAGDLALRDLTPEEGVVFNAEISAAIEENLAHTDYGQVLAGRGVTTVALDDDGAIVRYQPDGTTTVLAPAQR
3506616..3507194                   hypothetical protein; MSMEG_3436                                                     N/A                 MKRLDLVVGPNGAGKSTFVELTLAPLLTGSAFVNADEIAKRRWPHAPAEHSYEAARIASDTRLKLIELGESFIAETVFSHPSKLQLIDTAQAAGYTVVMHVVMIPEDLAVLRVQHRVRAGGHHVPEEKIRERHQRLWPLVALAAARADISTFYDNSAVRGPRIVAQLAGGFAVGRPAWPMWAPQVLTSRWPE
complement(3507206..3508558)       PHAGE_Lactob_LF1: lysin; MSMEG_3437; phage(gi418489408)                              4e-05               MVRTHTVAAGETLSGLALRFYGEADLYPLIATASGIPDPGVIAVGQRLIFPDFVRHTVVPGETLSDVAARFYADAALAPLIAAASGIAPTTDAEAGQRLVIPDITRYPVVAGDTLSALATRFYGDSAFYPLIAAVNGIPNPNVIEVGRVLLIFAGRSDGFGLRIVDRNESDPRLWYYRFQTAAVGWNPGINVLLPDDYRTSGKTYPVLYLLHGGGDQDFRTFDFLGIRNWTAGKPIIVVMPDGGHAGWYSNPVASFVGPRNWETFHIAQLLPWVEANFRTYAEYDGRAVAGFSMGGFGALKYAAKYYGHFASVSSHSGPASLRRDFGLVVHWANLTSAVLDLGGGTVYGAPLWDQARVSADNPVERIESYRNKRVFLVAGTSPDPLNWFDSVNETQVLAGQREFRERLRAAGIPHEAHEVPGGHIFRPEMFIRDLDGIIARLRPAAAVEV