gi|114326611|ref|NC_008342.1|  Nitrosomonas eutropha C91 plasmid2, complete sequence. [asmbl_id: NC_008342].55635, gc%: 49.68%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
12411..12490                       attL                                                                                 N/A                 CGACCAATCACAACCACAATAACAGCAAAAGCAAGGCTCACCAAGAAGCAGGGGGGAACAGAAAATGAGCATGGGGGAAC
complement(14424..17117)           PHAGE_Synech_S_SM2: head completion protein; Neut_2603; phage(gi326781764)           7e-05               MANKRTPKAVSASLDFAFFRFLWRFYQDNRGAIRQNQKELTRKFLDFNNPEKNPKAFLRQPQFEALETYVFLKEFLGNAKVEEIFKAWYERSGKFEGRKFSFFLDNTVQEMIKFDESDELDLNSYKVLFEKMRKNSRTYPNYIFALTMGTGKTILMATCVFYEFLLANKFPKDARYCHNALVFAPDKTVLQSLKEIEAFDLTRVVPPEYVNFLTTHLHFHYLEEAGTSLDTLDRSRFNIIVSNTQKIILKRQHKEKTSVDKLFGATGETLAVTGVYADAADLYNFDQPEEEGELTTNQRFERLRRLKQLGIYVDEAHHAFGKALAKDMGVGAKATDTSLRTTIDILAASLNAAGTRVVACYNYTGTPYVGREVLPEVVYAYGLKEAIDKGFLKNVTLHGYANTRTDEFIDIAIESFLNGSGNLRPEGMLPKLAFFAATVEELTEELKPAVERALLKHGIPTSRILVNVGDSKITTNDDIREFNRLDTEGSEKQFILLVNKGREGWNCRSLFGVGLFREPKSKVFVLQATMRCLRSIGQAQHTGHVFLSEGNLSTLNDELQQNFRISTDELQKTGKDKERVEIRVVEPPIKIKLVRVRKQYQMRDKQLVIGQALMPERADAQKWGELVEKYRLIETRQDGLTPADAARASGSRTFDLTARREKRTFSPMTLVAEVSRYLNRNPLEIEELLAATKEGSDELVAITNEFNELLYDEIIPRLFHQLYDLDESQQTEEHEVDLIKLPTNGYYEVSAAKDKIVRMHDAQIKDDERAKSFHLDTYCFDSGSENWLFWDLLREQRVKKIYFTGMLTHGQSDFFIQYIDPDSRTVRSYYPDFIFQREEMDGSLKYVIVEVKADNQIEDAVVQAKKDFAQQIAVASGMEYRVLKSSDADKRNYRVLM
complement(17107..19095)           PHAGE_Campyl_CPX: putative DNA methylase; Neut_2604; phage(gi371670951)              1e-22               MNNNTPAQESLQLATPAGGATNVEKYKFEPIKGYPMLNWRGKRPFTSTQYYPAQLKEVHGEEVDGWRNKIFWGDNLQVMSHLLKQFRGKIDMVYIDPPFDSKADYRKKIHLKGITVAGDMAAFEDKQYGDLWTNDEYLQFMYERLVLLRELLTEEGSIWVQCDWHRSHHIRCLLEEIFGSSNFLNEVAWQRTDPHNDAKSRLGIIHDTIFWVAKNKEKVFYDWQAAAGDLSDSALSEYSLVLLDDGSVVDYSEETENLGRRFKVENTTYKGKDSKRQFEWRGVKPSPNRVWAYASPKEMDQALERGELYLRDPRKGSTRCKVFFLEKSNGRLLQSIWTDCGRMKGGSDYPTRKPEQLLERIITAGCPAGGVVLDTFVGSGTTAVAAQKLGRKFIVADINLGAVQSSTKRLINSAVEILQQPLNEEERAFWGFEIHNVNNYDIFRNPVQAKELLIEALEIQKLEFSTVFDGEKDGRMVKIMPVNRIATRADLNELIAGFDYKAWERKQNESPNRPVEKITLVCMGHEPTLRAELEYAAKPFKIDVEVVDILRDKADLEFKRDSQAKVSIKKGELVIEKFYPMNLLQKLSLQKESVEDWKELVESVLIDWNYDGAVLQPAVLDIPSKNDLVKGAYTVPQDAGTIYVKITDLLSESWEGSVSYGE
complement(19095..22010)           PHAGE_Bacill_36: PcrA helicase; Neut_2605; phage(gi156564011)                        3e-38               MTTFVPLFQSKANPQQLEAILATDGPVLIIAGPGSGKTFTLVERIAYLITQEGVAPESLFVVTFTDKAARELTTRISNRLTNLGIKFNLNEMYLGTFHSICLRLLEDFREFTWLKRSFTLFDQFDQQYFLYQHIKDFRELPDAQLVMGDDQTGRWMQSENLLKWVNKVREEALDATTLTAAPELEICALATCFAKYQELLHEHNSLDFSGIQYEALRLLEKRPEVLAQLRERLTHLMVDEYQDTNTIQERILLLLAGENKNLCVVGDDDQGLYRFRGATIRNILEFPSLFTDDQCKQVKLTVNYRSHPDIIRFYNEWMKEQVWDDGTRVFRFAKQIVPCEDDFPEMPTAVRLAASNDNGETTNWHAEVLAFLNGLKASGKLADWNQVAFLFRSVKNDKVVALARFLEAQGVPVFSPRSNMFFEREEIRLMIGALIFLFPQFPKVRAWAEGVTLPIWDYYDHQCFKPFTDELRKPENKPLLDWARPLAKRHAVLAQNTDYAFSGLFYQLFQFPLFSHFLTEEAAQGVDKGRAARNLGTFSKLLTKFEYLHFVSVLNPSFLEKNIRDLFNQFLRFLQDGGIGEYEDEAEYAPKGCISFLTIHQSKGLEFPVVVCGSLEAVPRKQYSALDVLLEDGGYLSKERFEPLDHIKNFDFWRLFYTAFSRAQNLLVLAAQEKQGRGKSPSKYFERLFYELPSWRDVDLSALTYEAVKQINLKREYSFTSHIAVFENCAEQYRFFKELEFAPIRESPMLFGTLVHQTIEDIHKTVLRGEEGSITLDGIKGWFSANYAMLSKKERVYLAPSSQQAALLHVLRYFERENGNWNRIKEAEVEISLVKDQYILKGSVDLIRGEHDTVEIIDFKSEKKPDMERDRDRLRQYQSQLEVYAHLVEKRTGQKVSRMHLYYTGEDGGTPYVSFSKDDRAIGKTIARFDDIVARIERQDYGIATRPAKLCLSCDMRAYCDNKNWKFRKSN
complement(22130..23098)           PHAGE_Pseudo_B3: putative transposase B subunit; Neut_2606; phage(gi56692579)        8e-07               MRVEVMQYYGLTQPLDQGGYYETEHHKQLIKDIKGAIQEGRLIAVCGVVGSGKTVTLRRLQQILKEENRITVAKSLSVEKHSIKLATLITALFYDLAQDKLVQIPKQGERRERELQELVKKGKRPVALFVDEAHDLNGNTLTGLKRLMEVVEDSGGRLSVILAGHPKLRNDLRRPTMEEIGYRTDIFTLDGIAGSQREYIQWLLGTSITKTDSEAILTAEAIDLLATKLRTPLQIQLHLTLALEAGYQIGEQPVTAALMESVLSRQLDDLEPTLMRHGYRLKDMVEQFDAKPAEIRALFRNQLDPARTAELRDCILAAGLPI
complement(23088..24743)           PHAGE_Pseudo_B3: putative transposase A subunit; Neut_2607; phage(gi56692580)        2e-10               MDGRRKTIPVDSLLQLRQRLDRLPRKSPERATQIAAVAGLYGISATTVYRALHVFQKPRAAHRADHGKPRLLPQPELERYCELIAALKLRTTNKQGRHLSTGRAIELMEDCGVETAQGLVKVPKGLLRRPTINRYLSVLRLDRPHLLREPTAVRFQAEHSNDCWQFDMSPSDLKHIDKPDWIDPAKGQPTLMLFSVVDDRSGVSFQEYRCVYGEDAESALRFLFNAMAAKADTTFQFQGRPKMIYLDNGPVAKSRVFQNVMQALDIEWQTHTPAGKDGTRTTARSKGKVERPFRTVKEAHETLYHFHKPETEKQANEWLMRYLLRYNNQNHRSEKHSRLEDWLSNLPPDGLRDMCTWEQFCRFAREPECRKVGVDARITIGGTAYELEPNMAGETVILLWGLFDDEMYVEFDGEKFGPYHPVSGPIPLHRYRAFKRGKADERADRIRALADQIGLPISALAGNDVQLTPPTVETPVPHQPFDATAHEYRFSTAIAAKLSIANELATPLAKLPAEDRFFIDHVLAETLMHRVVLSRIREYFRNKKSGGDHAG
complement(24727..25287)           PHAGE_Ralsto_RSM3: hypothetical protein RSM3_gp14; Neut_2608; phage(gi209901327)     5e-30               MALYGYARVSTNDQDFTLQEQALRAAGCEVIRAEKASGTSRTDRTELQVLLDFLRRGDTLVVTRIDRLARSIKDLQDIVYTLKKQGVTLKATEQPIDTRSAAGKAFLDMLGVFAEFETNLRRERQLEGIAAAKARGVYRGRKPSIDPAEVQRLRSEERLGATEIARRLGIGRASVYRALANDGRSA
complement(25611..25970)           hypothetical protein; Neut_2609                                                      N/A                 MKIISPRTHGYLDFLTVIIFLLAPVLLNLSQVPAILAYVLAFVHLAVTLASGFPVSTIKIIPFILQGWIERIVGPVLVAVPFILGFAEEPIARNFYVVMGIVIIAVGLLTDYQEENRSY
complement(26077..26736)           Crp/FNR family transcriptional regulator; Neut_2610                                  N/A                 MNPFLSCTWETWKKEYPSIQLASLPDKAFLYRQGDRCSSFFWIKNGIVKLSHLTKQGNELTLTLLKTGDIIGYLQVGDFTNQIMEENAQALGKVDFYRLEYIDFKKLITSQANLSWQILESVYAHKQQIERKLRAILTQSVEQRLIVMLLELAKLFGIRCMHGYALEISLTQQELADLVGASRPVISTIMNQFRNRGMLDYTREHICVNDTALSLIDPR
27307..27921                       PHAGE_Burkho_KS14: gp6; Neut_2612; phage(gi327198275)                                1e-39               MQIGYMRVSKADGSQATDLQRDALIAAGVDPSHLYEDQASGKREDRPGLANCLKALRRGDTLLIWKLDRLGRDLRHLINTVHDLTARGIGLKVLSGQGAAIDTTTAAGKLVFGIFAALAEFERELIAERTKAGLASARARGRKGGRPFKMTTTKLRLAMAAMGQPETKVSDLCQELGITRQTLYRHVSPKGELRPDGKKLLDGQ
28006..28644                       PHAGE_Burkho_KS9: hypothetical protein gp28; Neut_2613; phage(gi255033760)           3e-35               MCSHYESIRDANRLLQYFGVEQPLDICFDVWPTYCSTFIIKPDEVDTGDEAVAAWIALSGQFGLLPHWAKDTTFGRRTFNARSETVSEKPSFKEAWRNGHRCIIPVEAIYEPDWRSGKAVQTRIARNDGEPMGIAGLWSTWGQGSQKIDSFTMLTINADDHALMNQFHKPGEEKRMVVILPKASYKDWLSVPVHEAKVFLRQYPADRLGISS
39603..39682                       attR                                                                                 N/A                 CGACCAATCACAACCACAATAACAGCAAAAGCAAGGCTCACCAAGAAGCAGGGGGGAACAGAAAATGAGCATGGGGGAAC