gi|114326555|ref|NC_008341.1|  Nitrosomonas eutropha C91 plasmid1, complete sequence. [asmbl_id: NC_008341].65132, gc%: 49.80%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
7602..7616                         attL                                                                                 N/A                 TGCCTGTTTCTCAAG
9523..10083                        PHAGE_Ralsto_RSM3: hypothetical protein RSM3_gp14; Neut_2542; phage(gi209901327)     5e-30               MALYGYARVSTNDQDFTLQEQALRAAGCEVIRAEKASGTSRTDRTELQVLLDFLRRGDTLVVTRIDRLARSIKDLQDIVYTLKKQGVTLKATEQPIDTRSAAGKAFLDMLGVFAEFETNLRRERQLEGIAAAKARGVYRGRKPSIDPAEVQRLRSEERLGATEIARRLGIGRASVYRALANDGRSA
10067..11722                       PHAGE_Pseudo_B3: putative transposase A subunit; Neut_2543; phage(gi56692580)        2e-10               MDGRRKTIPVDSLLQLRQRLDRLPRKSPERATQIAAVAGLYGISATTVYRALHVFQKPRAAHRADHGKPRLLPQPELERYCELIAALKLRTTNKQGRHLSTGRAIELMEDCGVETAQGLVKVPKGLLRRPTINRYLSVLRLDRPHLLREPTAVRFQAEHSNDCWQFDMSPSDLKHIDKPDWIDPAKGQPTLMLFSVVDDRSGVSFQEYRCVYGEDAESALRFLFNAMAAKADTTFQFQGRPKMIYLDNGPVAKSRVFQNVMQALDIEWQTHTPAGKDGTRTTARSKGKVERPFRTVKEAHETLYHFHKPETEKQANEWLMRYLLRYNNQNHRSEKHSRLEDWLSNLPPDGLRDMCTWEQFCRFAREPECRKVGVDARITIGGTAYELEPNMAGETVILLWGLFDDEMYVEFDGEKFGPYHPVSGPIPLHRYRAFKRGKADERADRIRALADQIGLPISALAGNDVQLTPPTVETPVPHQPFDATAHEYRFSTAIAAKLSIANELATPLAKLPAEDRFFIDHVLAETLMHRVVLSRIREYFRNKKSGGDHAG
11712..12680                       PHAGE_Pseudo_B3: putative transposase B subunit; Neut_2544; phage(gi56692579)        8e-07               MRVEVMQYYGLTQPLDQGGYYETEHHKQLIKDIKGAIQEGRLIAVCGVVGSGKTVTLRRLQQILKEENRITVAKSLSVEKHSIKLATLITALFYDLAQDKLVQIPKQGERRERELQELVKKGKRPVALFVDEAHDLNGNTLTGLKRLMEVVEDSGGRLSVILAGHPKLRNDLRRPTMEEIGYRTDIFTLDGIAGSQREYIQWLLGTSITKTDSEAILTAEAIDLLATKLRTPLQIQLHLTLALEAGYQIGEQPVTAALMESVLSRQLDDLEPTLMRHGYRLKDMVEQFDAKPAEIRALFRNQLDPARTAELRDCILAAGLPI
12800..15715                       PHAGE_Bacill_36: PcrA helicase; Neut_2545; phage(gi156564011)                        3e-38               MTTFVPLFQSKANPQQLEAILATDGPVLIIAGPGSGKTFTLVERIAYLITQEGVAPESLFVVTFTDKAARELTTRISNRLTNLGIKFNLNEMYLGTFHSICLRLLEDFREFTWLKRSFTLFDQFDQQYFLYQHIKDFRELPDAQLVMGDDQTGRWMQSENLLKWVNKVREEALDATTLTAAPELEICALATCFAKYQELLHEHNSLDFSGIQYEALRLLEKRPEVLAQLRERLTHLMVDEYQDTNTIQERILLLLAGENKNLCVVGDDDQGLYRFRGATIRNILEFPSLFTDDQCKQVKLTVNYRSHPDIIRFYNEWMKEQVWDDGTRVFRFAKQIVPCEDDFPEMPTAVRLAASNDNGETTNWHAEVLAFLNGLKASGKLADWNQVAFLFRSVKNDKVVALARFLEAQGVPVFSPRSNMFFEREEIRLMIGALIFLFPQFPKVRAWAEGVTLPIWDYYDHQCFKPFTDELRKPENKPLLDWARPLAKRHAVLAQNTDYAFSGLFYQLFQFPLFSHFLTEEAAQGVDKGRAARNLGTFSKLLTKFEYLHFVSVLNPSFLEKNIRDLFNQFLRFLQDGGIGEYEDEAEYAPKGCISFLTIHQSKGLEFPVVVCGSLEAVPRKQYSALDVLLEDGGYLSKERFEPLDHIKNFDFWRLFYTAFSRAQNLLVLAAQEKQGRGKSPSKYFERLFYELPSWRDVDLSALTYEAVKQINLKREYSFTSHIAVFENCAEQYRFFKELEFAPIRESPMLFGTLVHQTIEDIHKTVLRGEEGSITLDGIKGWFSANYAMLSKKERVYLAPSSQQAALLHVLRYFERENGNWNRIKEAEVEISLVKDQYILKGSVDLIRGEHDTVEIIDFKSEKKPDMERDRDRLRQYQSQLEVYAHLVEKRTGQKVSRMHLYYTGEDGGTPYVSFSKDDRAIGKTIARFDDIVARIERQDYGIATRPAKLCLSCDMRAYCDNKNWKFRKSN
15715..17703                       PHAGE_Campyl_CPX: putative DNA methylase; Neut_2546; phage(gi371670951)              1e-22               MNNNTPAQESLQLATPAGGATNVEKYKFEPIKGYPMLNWRGKRPFTSTQYYPAQLKEVHGEEVDGWRNKIFWGDNLQVMSHLLKQFRGKIDMVYIDPPFDSKADYRKKIHLKGITVAGDMAAFEDKQYGDLWTNDEYLQFMYERLVLLRELLTEEGSIWVQCDWHRSHHIRCLLEEIFGSSNFLNEVAWQRTDPHNDAKSRLGIIHDTIFWVAKNKEKVFYDWQAAAGDLSDSALSEYSLVLLDDGSVVDYSEETENLGRRFKVENTTYKGKDSKRQFEWRGVKPSPNRVWAYASPKEMDQALERGELYLRDPRKGSTRCKVFFLEKSNGRLLQSIWTDCGRMKGGSDYPTRKPEQLLERIITAGCPAGGVVLDTFVGSGTTAVAAQKLGRKFIVADINLGAVQSSTKRLINSAVEILQQPLNEEERAFWGFEIHNVNNYDIFRNPVQAKELLIEALEIQKLEFSTVFDGEKDGRMVKIMPVNRIATRADLNELIAGFDYKAWERKQNESPNRPVEKITLVCMGHEPTLRAELEYAAKPFKIDVEVVDILRDKADLEFKRDSQAKVSIKKGELVIEKFYPMNLLQKLSLQKESVEDWKELVESVLIDWNYDGAVLQPAVLDIPSKNDLVKGAYTVPQDAGTIYVKITDLLSESWEGSVSYGE
17693..20386                       PHAGE_Synech_S_SM2: head completion protein; Neut_2547; phage(gi326781764)           7e-05               MANKRTPKAVSASLDFAFFRFLWRFYQDNRGAIRQNQKELTRKFLDFNNPEKNPKAFLRQPQFEALETYVFLKEFLGNAKVEEIFKAWYERSGKFEGRKFSFFLDNTVQEMIKFDESDELDLNSYKVLFEKMRKNSRTYPNYIFALTMGTGKTILMATCVFYEFLLANKFPKDARYCHNALVFAPDKTVLQSLKEIEAFDLTRVVPPEYVNFLTTHLHFHYLEEAGTSLDTLDRSRFNIIVSNTQKIILKRQHKEKTSVDKLFGATGETLAVTGVYADAADLYNFDQPEEEGELTTNQRFERLRRLKQLGIYVDEAHHAFGKALAKDMGVGAKATDTSLRTTIDILAASLNAAGTRVVACYNYTGTPYVGREVLPEVVYAYGLKEAIDKGFLKNVTLHGYANTRTDEFIDIAIESFLNGSGNLRPEGMLPKLAFFAATVEELTEELKPAVERALLKHGIPTSRILVNVGDSKITTNDDIREFNRLDTEGSEKQFILLVNKGREGWNCRSLFGVGLFREPKSKVFVLQATMRCLRSIGQAQHTGHVFLSEGNLSTLNDELQQNFRISTDELQKTGKDKERVEIRVVEPPIKIKLVRVRKQYQMRDKQLVIGQALMPERADAQKWGELVEKYRLIETRQDGLTPADAARASGSRTFDLTARREKRTFSPMTLVAEVSRYLNRNPLEIEELLAATKEGSDELVAITNEFNELLYDEIIPRLFHQLYDLDESQQTEEHEVDLIKLPTNGYYEVSAAKDKIVRMHDAQIKDDERAKSFHLDTYCFDSGSENWLFWDLLREQRVKKIYFTGMLTHGQSDFFIQYIDPDSRTVRSYYPDFIFQREEMDGSLKYVIVEVKADNQIEDAVVQAKKDFAQQIAVASGMEYRVLKSSDADKRNYRVLM
25780..25794                       attR                                                                                 N/A                 TGCCTGTTTCTCAAG