gi|109946640|ref|NC_008229.1|  Helicobacter acinonychis str. Sheeba chromosome, complete genome. [asmbl_id: NC_008229].1553927, gc%: 38.18%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1397007..1397255                   PHAGE_Helico_KHP40: hypothetical protein; Hac_1604; phage(gi431810902)               8e-06               MQALKASACAIEPTQKQEKERASERQKRRLKTTRAKKALKSVLKPTKRAFSERQKTCAKSSVKEASGKEESESVKRSNHETH
1397205..1397220                   attL                                                                                 N/A                 GGCAAAGAAGAAAGCG
1397361..1398497                   PHAGE_Helico_KHP30: putative phage integrase; Hac_1606; phage(gi431810542)           4e-111              MKNTFTLYYRDQTLYLSYYDDNNERHRVSLKKATECLKMPANEALKALKKQSLKQILAFIKRVDAMDEANKRLKNAEKQTIKLQARITILEALKRFLGLKIGLKNTSLHSLEIVFNSIFSAMGLKESAKLQKITKEAIAKYHEQALQRYKKNTLKTQHANLKSFLAFCESEGYLEKNPYFAVTLKNAKEAKKIEPFSLEEVEAIIKNAPSLSLKAFLMVAFLTGMRTGEQLALTWEDIDFDHQTISINKSLNEWGQITSPKNQNSVREVDLLEPAAKILKELKKSEPAGKKFVFIGMPRRTSVFQRRFRELLKALDLKDRKLYTTRHTFASLMLSQGEEPMWVSKMLGHKDLNTTYGAYSHYIPQQDRERAKFLKGIF
1398497..1398673                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1607; phage(gi431810543)               7e-13               MNYLMYLQMKAEKTDLSFKQFIEKLEALQKTHTLKESVCSVKNKRVTSYCIMLQRKGA
1398675..1399004                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1608; phage(gi431810545)               4e-29               MHCICNDQRVSDTALAIYVFIKKHATTFKLTIQDIAKRFNKSLPTVYKYLNQLKDLGYIEFERPRRKDGTFMKFVIFHIQNHPKSPYSKKEKKPTNASKPTIKHTKDLQ
1399001..1399948                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1609; phage(gi431810545)               2e-107              MNYIFKQPMQYGYVQISNDICNDQRVSDTAFAIYGFIKQHATTFKLTVASIAKRFNKSLPTVYKYLNQLKDLGYLEFERPRNSDGTFTKFLRFFIANHAKTAYVNPTSHQQRVLKWIKPPKQGSNAEDNEAQSILKPLSAYNNKKNKNKHAHIRAHEEFSHSEAIETHEVFQDQEDFKNPHENSFSFKSQISDPGLFARFKGFLSSILGNLDTKGLDPTERLAFEEFLNYRNEKHKISYSTKKALLEQCLSIKAQGEDLVFCIKQSIRRNYNEIYARMHFEKPYKSEAQKRNEEVMSYFDCDFKPNPKYNGYCIW
1400146..1400415                   PHAGE_Helico_KHP30: DNA helicase; Hac_1610; phage(gi431810547)                       2e-29               MKKHGKNPNELIEGLLLTKPKKISLRESNLKELQRLKRKNKSTLARLIRLAFLSGLKQFQRENLLVHLALSEFESFLEVLEAKNQRKRK
1400422..1401573                   PHAGE_Helico_KHP30: putative DNA helicase, putative DNA repair protein; Hac_1611; phage(gi431810548)     5e-141              MENLILKSFLDYPERMEVFLEDISLKSFDPFHQKIINALLEMKNNEQVIRLETIRLKLGEKAFESQAFQEILEADSYPDYLDLKSDFKTHLYLKKQESLAKELLEATRKSEVFDYEFLDKYVGLIPTRQRGKYFFEWEEFFQNQPAIEKIPTGLRFLDDLTEGGFEVGQMVLLSGDPEAGKTLLGVQVLVQAMQTSKVTYFGFEFSVRKHMETLKKQGFQIHGRNYFIDDQSYEMNDLIAQIRSLTKEGHKLFLIDSQMKIQAPLLRTAEEAETIKFTSLSELARRLQVVILFIIQNSKTDNYTPSGSRKGGHEAHVMIRLERLKNYDMPNLKEWSERVKHRKIIILKNKQTGLQGSQYLRISGYRFFETTKAKEEDPTALLF
1401586..1403157                   PHAGE_Helico_KHP30: putative primase; Hac_1612; phage(gi431810549)                   1e-172              MRITNIEGLKEQINIVEVLEKYLDLSKAGANFKASCPFHDERSASFMVSREKNIYKCFGCDASGDAIRFLQEYKKMSFAEAVEEIASLYHYKLEYAKNPKTERNERLKAVLAYANTLFKERLKNEERALHYLMHTRALLSPMIEAYDLGYCTPKELEILKNRFEHEDLILSGLFNNKEKNLKSFCNYRLTIPLKDSHGVIRSFAARSFVFLMPASVNAPKYLHGRETSLFNKSVFLYNYYRAKPFVLQKKQIIICEGFFDVMAYEHFGYLNAVCTLGTALSKEHLAFLEKLNVELCLSFDNDHAGLEATIRALELCWKMHITTVSVIAIKDASMKDLGDYQKANQRPCLSKMNGFEFYCAALFRNDLSAQQKDGNYKKILKTLERFEPFMRLFCTQILNKVLRQKQIAPVKEKPVQKLDLLEGRILLTMLISEEFRYVARRCLSPCDMGFPILFKRLVSGDFKGLDFLKQFKPLPLNSQKTALKEQKMKGLKNSLHDALRRKDYGLFQVLNDQIKAIQNAPLH
1403391..1404983                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1614; phage(gi431810550)               2e-129              MGFFDVIAETPSKSSPASDKAFLSGLVSALGDSLSRLSAQGPSGGYPKFLSDETPNTLRFRDFNNLFAYLDQQNRPANERLKRALEQILNHETRLSQLQEESATTQNALNGLNHETHNLNHQIQEQNQAINTLNHEIAGLNQEMHDTLSAQEQDQESLSGLELQIKEKKSAIEESLKTLEALKKALQRQKKQKKWKKQFDFLSDRAPPHTQQEHALMAAQQRNGLCALFLADPYAIFPKGFIYEYHNPGKETTNALNAPNPMDGINNQFQDNPLNQVINNRYQKFLPGNAAYHALGSIKTVKALKFHDLVLHFDSPSAKENALFFRQISQYAKGERLKILMLPKKDATPPSKSEEKIEEQEKDLNELMKSFKEAQENALKRKESLKAKENHSETLKNAIHQKERQKNAIEQQKQRLEKEKNAKEQEKQRLERQKNEKEQEKQRLEKEINALAGERIPMHWFLNPLLQVDGSLVASITTKDKSVREYYHNEKRITEILGFYRWSASIEKLSERFSKLNPSEREELTRLLLP
1405053..1410272                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1615; phage(gi431810551)               0.0                 MQGLEETIDLKNLPSTPLYPAKNPPILTPEQSEQKKKDLIASLHAKSKELKELGLLDKLGDFVGFQTQNAKEREKQISAIKTKALDHQLDFKELPSVVQDDYYQKAQPSLLNPLKTKNEIAKEDYQKDLQRKAILKKTSQELTQSDKDLMASDRGFFNSALDYIQGSSDAEKLKEYKEIEKAKGITEDIEKAYSLFSSMDKNKDFFSLLSGGDQEAQEKAKRDFETIAQKLYHFDKVIYNEKNEPFVVKGDKVYKINDGFMDNFTQNLLNNKFSLASSLAGGFAGAKAAKNAGPLGLAAGVITGAALGATTGGISDAMIADLALDREHQADAIIRHALNEGVLSLVTDTITLGAGKAIKPLVKAPLKLAEMSMPFAFAKNFFTGNAKRASEILETTLSKEQQDALKEFSASFGGQIKPNKENDFLREKIQSAFKNDANKLKAYDTIKEILTLNNHQEQQEAFIRAIRSDATGNTIAFLVEAANLSPKANANLKTILNQTTENLTKSLKQLDLKDYEIKSVFDRLEQGTKESYDKALDEVIGKLYDDSYKVHLRETVQDLSRFEKFANDLKAQGGIDAHALSFLRQIEQNVYNPNGVSYEQLKNARQLINAYLRNVKDPSTLGTIQKASAQFLKKDIDNGIENLLKQNRSAYEKMSELQRSAINDYKNMKQALELVDKAKIRDKNTQESEAIKSLMKTIQGQGEKDLSNYQALTQGLNLEDKQRLELSMLNRLMEESLQQTPSVKVFDSARFFNQLNEFKNDIFTTPKAKEYIDIVSGFDKLFRNDAKIAQSLKPALTKNLSQGLATTLSGALKFQGVKFVLGTLYRNAPDRVLGIKLPKALNEATAGAALKYHIKRALERSHSISDFNKQLELSAKAAKFSNRTLKLIEELNNGVKQASEEIRSKARDLEHAITPLKEFGKNYPEFALRPKEALEKLLQEKNGQVAGAFYRDDLGGIDFVWGNKDYGLEHILKRREEQAIGKGLNEAEAKEYALNIAKTIPEVIDKGVKVEQNGRVAIEYQNIRVGLKDNWKGEKLPNHWIITGYEKTENSESLYAHPLITKSETLPLNSIEPDPTQKPLTSQGDLLKKPENLNETPQVTQNLSPLEQAQAEKRAKLEQEALASEQDFLRAKERETKRKEALKRKLEHERGNAGNIESQTHIEVGEDIPAKILAEHPKSRVRLNEKEIYDLNYAIVNAKDLKPSFTTGGTQKRTDMNEEQIESIAKNFDPKKIFGSGGFEDLPIILHDGQVIAGNHRIFGMLNFTPKSRYIYDKAIKEYYHIDLKPDELLVRVPHERLNNTEINNLAAASNQGRFNSESDHALAVLSRYEAPLKALEKKLNADSVYSLKRIVAKNLNFDKASHPNVTDSNLALLMYNMPRTKTQGIELLNRWHKEFSNDIKSYEKVKKMFTDNAGSFHNLIFDMNFPQVSLNAYLSDIMDRVFANLKKYPTTSEGLKDLSEKFYQTRSLEMFEKSDQRTSDISEILGSAFARFARLDDPSKALFEALKSDNIKKGLKEFRIADETKDIFDPNSKEFKDIDIYDFTNYLLMANREANENNPIINRLIKAVKGMQKEHDGLKVAKEGTIEEVKKRSFEVIEDKEAFLKGLKGIKPTPLPKEIDTDSFLNALNGVKNKENFIKHLESKPDSKHRLALLHLVEPTLKEPDITLIFKDQGKEVKKEHIKAFQSDPKTIYYFLVTQDKDSKLLTGLKVKPIYIKAEIDKADIIHSFIPQGRTLKE
1410338..1411588                   PHAGE_Clostr_phiCD6356: putative phage tail tape measure protein; Hac_1616; phage(gi326536862)     4e-10               MNIPNLPDSALEISEVVQVKELKNELLEQLQNALKENSHFTDQVRLSLKGIARILETLLSLEFFKNADAIDASLRNSVEWLMHASEGLKSKMKEYEGFFSAFNASIQKNEQEITEILHQNTEKITSQILALENQIKKSAHKLSADYQAFLEQEKQNASEQINKNKQESLETLKQEKESANAAIEKNRQESLLALKQEKESANEAIEKNKSESLTSINEAKESANAAIEKNRQESLLALKQEKESANKEIQEAKQTAFNELKKELEPKVSGLFVGAYTIEETINIAGGQGKIKDLSDHALEKSKKYLIEVFFPFTNSNYSKKEALFRLQTSEGYLKESVQKFTLKYQEKGIYHSKLLGENISGVLSLHHVYFSGNIDKITTIIQEIPNHAIVRKELENDRFKDALMIQPQFNIGRKL
1411585..1412157                   PHAGE_Helico_phiHP33: putative tail fiber; Hac_1617; phage(gi371671354)              1e-27               MSSMVLENISQYEEYIPFVFEALKLNGGFQVLEDGKMFLTVYEDLEGNKNTPTKEQFLKKIKEVTLEKKKQELKEQIDELCKEKMAQGFFSSVLGEMHAYGLSLEDQMDLQGLVLLGSSALIACAKAKEGGVFEKKQKKTHTKEQIETLLQELLKHKHALIAFYEAQKERLDFIAQLEEVEAFEIKEYLI
1412167..1412562                   PHAGE_Helico_phiHP33: hypothetical protein; Hac_1618; phage(gi371671355)             2e-43               MRKVVFNASGILEAFDYRGVKIHQQEVQTSALLPITQKIVFKFNDRFFAVCEGVGDLDFKDYPKNLDFSALESETIENYLLNAKEPKNELQKALLADFLAVYDKNIEKQGYYLKPRFFCEREMQLIERVLK
1412559..1413146                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1619; phage(gi431810552)               3e-74               MIEVSEIMIKVRERLNDTEGGDFAILDSVLIENINQALVKLCLEFKLNKTIARGLLCEEERFLSIPNLLGIESVKLDKQEITSRNTIEKESGTLELLVLSDKLSVTPFKEGELEVVCYIYEEAHSVLDSVGLPRIALDAIVYSVLCSLLEIPNNEMHLNLLAHYRQLLQSAKDNLTQYLNLMYSENICFSKVVRV
1413383..1413931                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1620; phage(gi431810553)               9e-82               MGIKEKEIELETLKREIAQAEASLEQDFIKHMVDKTDEKIEDLFFSNKPEFYRFVFTEQNHYLREKLTDKVSRAMDLSDEIQKDKDQEALEKDKEAFLKAHPEANMDELVEFYNEEIPNRIKTQIDKLEGVAFFEAVLDYFNALNAKEEPKSEEEAKLPKEALGNGVSGVGYSHNDSVMTRY
1413941..1415083                   PHAGE_Helico_KHP30: structural protein; Hac_1621; phage(gi431810554)                 0.0                 MLEKLNHINFNNLSNNPNLGVEIGKEIQNASWIKSPFYSITGTGADRGIRIFNVANQQPFRPRIKAQLSGSGVSGNTDFEANYDHLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYTEKMTVATIRKAVFYARNGLKANNHKAFPIKPVRATTQSVGSVMVQNSSYLIFLDSYQANQLKADSEFKELQKLYAFAGEDKAMLYSGLLGVIDNCPVVDAGVWNKLNVGMPNSSISGSEFKRYINKANVNNIVTPEELKEKIKIAKTEKLSENKEISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSVDGVSTPYDNQDFAVIGLISNME
1415098..1415457                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1622; phage(gi431810555)               3e-39               MKQKVHSVSYLAKAAFALKNGVYDLVALPSGAEVVKVSLEIVGSLTAGSVSVGFKDEKEKNYFLLLDKIETNKNATSAKDYSAKDNKVVVAEVKSVAGNEAQGILRVLYFLPSVVEVEY
1415467..1415898                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1623; phage(gi431810556)               1e-55               MFFKNPLNDPHYFREKNEILAERMPKHFGLLNYSKESYSDFLNRYNKPIETPKTSKFSSFMESVGGYGGLGVLGGIAGGLGSLIVGALHSSEQNKNAKEGMRMAKEQFELEKQRYNAREQERLNKEAALDRIAKENEDIMTRF
1415965..1417767                   PHAGE_Helico_KHP30: putative portal protein; Hac_1624; phage(gi431810557)            0.0                 MDFTTLENDFSTDYQHALKANSEFLEAKKYYNGNQLPPDVLNIILERGQTPIVENMFKVIVNKILGYKIESLNEIRLSPKQEEDRALSDLLNSLLQVFIQQENYDKAMIERDKNLLIGGLGVIQLWVQEDEEKNIEIGIKALNPESFIIDHFSTDKNALDARRFHKMLEITEQEALLLFGDSVMVDYSNRHHERIASVIESWYKEYDKEKKSYEWNRYLWSRNAGVYKSERRPFSNGACPFIVAKLYMDECNHYYGLFRDIKPMQDFINYAENRMGNMMGSFKAMFEEDAVVDIAEFVETMSLDNAIAKVRPNALKENKIQFMNNQADLSALSQKAEQKRQLLRLLAGLNDESLGMAVNRQSGVAIAQRRESGLMGLQSFLKATDDMDRLVFRLAVSFICEYFKKEQVFKIVDRKLGDRYFTINSGENNKIKPLKFDLILKTQLKTESRDEKWYNWNELLKILAPIRPDLLPSLVPLMLNDMDSPITNDVLEAIQNADALAKEAAREKAPYNAQIEALQIQKLQAEILELQAKAHKYTEQGALNQTANESEKINQALAFSEMQQKSANSSEKNENQKTKKLKTSDKTTWRKYRSAQNLDA
1417781..1419334                   PHAGE_Helico_KHP30: putative terminase; Hac_1625; phage(gi431810558)                 0.0                 MAKEQALRELALRELARRDFFQFLRLKWERYENKPFLDNWHIRYLCKVLECTQPNTSAHGELIRRLIVNMPPSYGKTEIIARCFIAWSLGKDRSKKIFYISYSDELCRKIANQVRDLMDSFFYKSVFFDEPLEYLQNNAREFILREGGGLFVTTLKSALTGFHANQILIDDPIKVSGMSSKKEVQEVNANFKESVVSRLQDTRSNITILMQRLGNNDLCGFLQNEREFDQETIRKWKIIQLKALNTNKEFYQIKDFTHEREVGTPLFEAKHNKEQLEALRLQMGNDEFSAQYQQDPVVSSGGYFDPVYLKKVFLHELGAMNTYIFVDNALSLSQNADNRAIVVVGVENYHESVRYIVLDCFFGIWSEEDTIKHLLAAKEAYKDAKTFIESDGGGLVLHRLLLVALARHNQQNKEKNKELLNDAIVCYTPSRKISKVDKIKAMRPFYNTGFLVFSHSGNNTEQIEKELFSFNPDKPFKKDDCIDALASAITHESVKAPLKREEKPHLMRRYHKPTWRI
1419337..1419516                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1626; phage(gi431810559)               3e-06               MKKNRIIRKLEKIKKIKKKPFNFFKNPRYRDFIAQIKSKQESDEELLERLETICLNGRL
1419529..1419732                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1627; phage(gi431810560)               3e-12               MWDEKILKIMPAVLFLFCILQTFELGLTILDMYKTEKLEKEVRNNLETLESINETLHDLIHAQGMKK
1419737..1420072                   PHAGE_Helico_KHP30: putative holin; Hac_1628; phage(gi431810561)                     5e-36               MKNKMQHAVVLSYEMARLMPYFLVGSIGLFVGILYVLRSIRGEKFETQTEKALYIIQGIGSSMLITWICYEITNYFFQLPLSVCVAISGGVGYLGAETLSSVAIKSLEKRL
1420069..1420290                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1629; phage(gi431810563)               4e-22               MKKLFLLALGFCALFSGCAKQIVYKEVKIPIRCDIERPMRPSARLESLEYLRSLLVYVETLENDLKFCTKTNP
1420340..1420885                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1630; phage(gi431810564)               4e-79               MYLVLLERKEDLKPLVKKGKEESGMLGNLRVFLCTHDQDMSDEALVEHYKDKDALLSCFSLENSGEGTDTPNLDKPIIAREYQLAWSDTSCTVPKEYQNKKCNNQRHEALQLVDKNHKDFAKRKILIHVGNSAHDTLGCILLGMQHDEDMIYKSSEAVKRFFDLVKEKGADQFVFKIIDKV
1420394..1420409                   attR                                                                                 N/A                 GGCAAAGAAGAAAGCG
1420887..1421672                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1631; phage(gi431810565)               2e-108              MDATRFIRHFILFKEALQKQNFNNKDLNTTSMQAALQSEQLALNEQAQDLQSEQLRAKMQADFLNMQASLQAVQADTLNKLIQCQAMLKSLKDNAMINRANALVSLLQVSANNTVTPVNFEAAFKIIAQIGAEYNQVTLNKEVITVEEKEQTDEFKKILNGLSKELEKLNQQSEINSIQVFSAKLEALKNEPIKLWGFSTLSNAKEGFFNEKNEEIASGSVCLFRSGEVGKHKISFKAIKDKTTLQKDITLSVVENPLKKG
1421677..1422219                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1632; phage(gi431810566)               4e-45               MAYFESISAGRGALEGYNQALDNQKNAHAALHASMGVFANSIANAGSFFDSAKIREEALKYQRMRDLANDKQKAQALELQKQQAEQSMDFAKRNQAMNEAAHQQNLRLGDLKNKALEQANKQAKAEFAWLLKTLPSVKARLFDPNAKKRASASVALEPNKPETIGKEEFALKFANPMFRN
1422258..1422545                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1633; phage(gi431810567)               7e-35               MPYAVIVVLLVLNANLKTQLALAHERLTTNEARLIKQNEAIKALELESQQYKSNKPLEITKIQDKYHKVILKDTTCEEKLHSYEALINAFKKTNP
1422604..1423488                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1634; phage(gi431810568)               5e-11               MKLYNKIQEFISESQTLQQKNHEVLELARNELNELINTKAKENLESLKNEITPYLEGKNIPLLVKESVKELVHQETLMQELKNALVSQFDKALTQDLKQELKSELKSELKSELLALLQTEELQSELLQAQNQIVKESVKAVQGALENKVLGILENNLNGIIESVVKNLDFSFLSAQPQAFFSVVNENLKEMFSQELKSEFLQNYIKKTVDNAFLNAEKLQALKQAQAQALICLQVILETNKQKLLEDALMLEAESLNHKLKIENEIAYQLKRKELISEGKLEDEALKSRIFKVV
1423498..1424343                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1635; phage(gi431810569)               2e-105              MKGYSMDERTQSEIFEEQLKLALKPQSKSESVRDETLANHPLANEALASEIPKEKETNEPSYFSTGIAYLDNKIKNRTITAFDYYMAKKYLGMDLNENLNARLHIKSENKTRLASINKATQDIFDDIKALDLGDDLIQKAQKHSGFFNQLKLWLNYQTKGLKGVDFDLAKTDNARMSYANRVAKTMAQGGQVTQKLRDEAKQMTAWGARDKEENTARASQTQEVLLNSLEKNMQNLESLGGNISPLMLMKLKEHKDKIHYINERGGKIDLNKYKSLSVKGL
1424343..1425173                   PHAGE_Helico_KHP30: hypothetical protein; Hac_1636; phage(gi431810570)               6e-77               MEEKPHNSHNPYPQDLKRRVREAYEDTLDTQEKIAAQFGISRQTLNGWAKQGEWIGRKVFNEIRAMHETLGMSIKELARKYKISEKSLAYVKARQGWKKRRITQEIEEKEAKEILGDKLTEKNMDLFLDTKKEEVKEVLKQSLDHLDLDPVVLEAITETTSGELLLKAMNTAYIKKQILFCAVVARGELIKMIKRASLTHNPKDSANIIVAAEKVSKLFIDAGVSLFGKEQIQVIENHQNTNLAQMNMSDLLALANSSGEDSAHPNDPTSDSASQL