gi|108793642|ref|NC_008122.1|  Yersinia pestis Antiqua plasmid pCD, complete sequence. [asmbl_id: NC_008122].70299, gc%: 44.83%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
36337..36576                       PROPHAGE_Xantho_33913: ISxcc1 transposase; YPA_CD0043; phage(gi21232565)             5e-09               MKEIAKRVHRIYCLLKLNIRRKGKQRLPACNPSPLAVPERLNLSGSVDFMHNAQCTERWVSFQYVIMSWMITIVKHWRL
36803..37420                       conjugative transfer surface exclusion protein; YPA_CD0044                           N/A                 MSETIWLEPSSQKTVYLQIKNISDKNMLGLAPQITKAVQDKGYTVTSSPEDAHYWIQANVLKADKMDLREAEGFLSQGYQGAALGAALGAGITGYNSNSAGATLGIGLAAGLVGMAANAMVEDINYTMVTDVQISEKTDTTLQTDNVAALKQGTSGYKVQTSTQTGNKHQYQTRVVSSANKVNLKFEEARPVLEDQLAKSIANIL
37527..37844                       PROPHAGE_Xantho_33913: ISxac3 transposase; YPA_CD0045; phage(gi21231087)             1e-06               MTQPKQTKRRFSPEFKLEAIEQVVKYQRSTIEVARALELDPSQLRKWIRQYKEEVSGMTPDNPALTPEQREIQSLRAQIKRLEMEKEILKQAAVLMSEFPIKSLR
37868..38326                       PHAGE_Entero_Sf6: putative transposase OrfB; YPA_CD0046; phage(gi41057343)           6e-27               MVELCRLLKITRSVYSASLNFRVDVKRLQLRELHQQSRGAAGSRTLSLLMRQSGYNVVRWLARRLMRECGLASRQPGKPRYRGEREVSLASPDLLKRQFKPSEPNRVWSGYISYIKVNGGWCYLALVIDLYSRRIVGSAISSSPDAELVCRA
38438..38632                       PHAGE_Entero_Sf6: putative transposase OrfB; YPA_CD0047; phage(gi41057343)           6e-12               MQSMSRRGNCLDNSPMERVFRSLKSEWLLVGGYMDVHHAVRDIGEWIQSYYNTPPSAQWWITAL
complement(38770..38883)           hypothetical protein; YPA_CD0083                                                     N/A                 MPKSLNAAKWVSIARIMAEGTAYEVEPDLCFTALGTV
39432..40598                       PHAGE_Entero_N15: plasmid partition protein SopA; YPA_CD0048; phage(gi9630492)       2e-160              MDLKSTLDRCIERGQFMTQEIAKSQFGNDSPAARTITRRWRITEAAELVGVTPQTIRNYEDSGKLPPPDTAMIGRVEQRTGYSIQQINDMRDVFKTRLSKPKGENPVVLAIAAHKGGAYKTSTSVHIAQWMALQGLRVLLIDATDPQATASLYHGYVPDLHIHEEDTLLPYYLGQRDDAAYAIKPTCWPNLEVIPSCLAVHRIESEIYGLHDQGKLPVAPHLLLRAAIESVWDSYDVVVLDSAPNLGIGTINVVCAADVIVVPTPAELYDYVSTLQFFTMLRDLMSNIDLNGFEPDVRVLITKFSNAIGSQSQWMDDQIRNAWGGMVLKEVVRVTDEVGKGQVRMRTVFEQAANQRSTPAAWRNAVSIWEPVCAEIFNRLVKPRWENA
40595..41560                       PHAGE_Entero_N15: ParB; YPA_CD0049; phage(gi9630491)                                 3e-79               MMKRSPVLRNAPSINFDDAKPAISNAEPSVSAPAVSQLASRVSGMKGNTIVLPVCGRNVAFTLKVIAAPDVESKTIVFSGNERNQALLSETSLDDLIPSFLTSGQQIPAFAREHNGNIEVADGSRRRKAAILTGSDYKVLVGNLNDEQMLWLSQIANEYRPTSAYERGLRYAQRLISEFEGNISKLAEAEHLSRKIIQRCIKTAGLPLKTIQLFANPNELSARSGEALSKAYENNVDTLKRVTHKIMKQKQEGRQFTTEELIVLLMPERKQPENIHKKSFGKNIEAKYSKDNVSFYLKSVPESLVKQIEELLNTYAKEHSL
complement(42105..42278)           PHAGE_Cronob_ENT39118: DNA polymerase; YPA_CD0084; phage(gi431811050)                2e-07               MKSPYPTWRDGYRYQKADIMLNDVGSRPGQIDMFDETPPHANSKHLMQVVDASIALG
42822..43064                       hypothetical protein; YPA_CD0050                                                     N/A                 MAHVTSVTLGEHLTGFVGEMIQSGRYGNISEVLRDALRLMEAREQRVQHVRDMVLAGTNVPVSHRLMDEIFSAAVKDTSV
43057..43356                       hypothetical protein; YPA_CD0085                                                     N/A                 MYKLSELADEDIYNIASYTIRHFGVTQAKLYHENLAKVFELLAKNPELGAECNWICSDIRRFQYKKHGIYYITLSNDILISRVLHQSIDIDVQDFPEHE
complement(43496..44155)           outer membrane virulence protein; YPA_CD0051                                         N/A                 MKISSFISTSLPLPTSVSGSSSVGEMSGRSVSQQTSDQYANNLAGRTESPQGSSLASRIIERLSSVAHSVIGFIQRMFSEGSHKPVVTPAPTPAQMPSPTSFSDSIKQLAAETLPKYMQQLNSLDAEMLQKNHDQFATGSGPLRGSITQCQGLMQFCGGELQAEASAILNTPVCGIPFSQWGTIGGAASAYVASGVDLTQAANEIKGLAQQMQKLLSLM
44349..44741                       yopE chaperone; YPA_CD0052                                                           N/A                 MYSFEQAITQLFQQLSLSIPDTIEPVIGVKVGEFACHITEHPVGQILMFTLPSLDNNDEKETLLSHNIFSQDILKPILSWDEVGGHPVLWNRQPLNSLDNNSLYTQLEMLVQGAERLQTSSLISPPRSFS
complement(44804..45418)           PROPHAGE_Xantho_33913: IS1477 transposase; YPA_CD0053; phage(gi77747809)             3e-59               MYRLYHLSGLGVKRRRRRKGLATERLPLLRPAAPNLTWSMDFVMDALATGRRIKCLTCVDDYTKECLTVTVAFGISGVQVTRILDSIALFRGYPATIRTDQGPEFTCRALDQWVFEHGVELRLIQPGKPTQNGFIESFNGRFRDECLNEHWFSDVSHARKTISEWRQDYNECRPHSTLNYQTPSEFAAAWRKGNSDSEGSDITK
45551..46723                       PROPHAGE_Escher_CFT073: transposase; YPA_CD0054; phage(gi26248360)                   4e-33               MLSREDFYMIKQMRQQGAYIIDIATQVGCSERTVRRYLKYPEPPARKTRHKMVKLKPFMDYIDMRLAENVWNSEVILAEIKAMGYTGGRSMLRYYIQPKRKMRPSKRTVRVETQPGYQLQHDWGEVELEVAGQRCKVNFAVNTLGFSRRFHVFAAPKQDAEHTYESLVRAFRYFGGSVKTVLVDNQKAAVLKNNNGKVVFNSGFLLLAEHYDFLPRACRPRRARTKGKVERMVKYLKDNVFVRYRRFDSFTHVNQQLEQWMADVADKRELRQFRQTPEQRFALEQEHLQPLPDTDFDTSYFDIRHVSWDSYIEVGGNRYSVPEALCGQPVSIRISLDDELRSYSNEQQVASHRLCSASSGWQTVPEHHAPLWQQVSMVEHRPLSAYEELL
46723..47079                       PROPHAGE_Escher_CFT073: transposase/IS protein; YPA_CD0055; phage(gi26248359)        6e-18               MHELEALLSRLKMEHLSYHVESLLEQAAKKELNYREFLCMALQQEWNGRHQRGMESRLKQARLPWVKTLEQFDFTFQPGIDRKVVRELAGLAFVERCENVILLGPPGVGKPIWPLLSA
47496..47921                       yopH targeting protein; YPA_CD0056                                                   N/A                 MRTYSSLLEEFATELGLEEIETNELGHGAVTIDKIWVVHLAPINEKELVAFMRAGILTGQSQLYDILRKNLFSPLSGVIRCALDKDDHWLLWSQLNINDTSGTQLASVLTSLVDKAVTLSCEPTMKKEEDDHRPSSSHLLV
complement(48069..48824)           PROPHAGE_Ralsto_GMI1000: ISRSO12-transposase ORFB protein; YPA_CD0057; phage(gi17546158)     8e-81               MMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVNHKKTHRIYCLEGLNLRSKRPRRHVTAKHRHARPEVTALEQCWSMDFVADNLFNGRRVRALTIVDNFSRECLAIEVGQGLRGDDVVAVMDRLKHSLGRIPQRLQTDNGSEFISKSMDRWAYENRVTMDCSRPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQEYNHFHPHSSLNNLTPAEFARSHQKGPDL
complement(48902..49168)           PROPHAGE_Ralsto_GMI1000: isrso12-transposase orfa protein; YPA_CD0058; phage(gi17546157)     7e-35               MKKTRYTEEQIAFALKQAETGTRVEEVCRKMGISEATFYNWKKKFGGMGVTELRRLRQLEDENQRLKRLVADLSLDKEMLQDVIRKKF
complement(50219..50770)           PHAGE_Salisa_1: hypothetical protein; YPA_CD0059; phage(gi388570712)                 3e-28               MRLFGYARVSTSQQSLDIQIKTLKDAGVKANRIFTDKASGSSADREGLDLLRMKVEEGDVILVKKLDRLGRDTVDMIQLIKEFDAQGVSIQFIDDGISTDGEMGKMVVTILSAVAQAERQRILERTNEGREEAKLKGVKFGRKRRINRKELLELHEQGMGATEIAKKMNIARSTIYKVINESQ
50934..53249                       PROPHAGE_Xantho_33913: Tn5041 transposase; YPA_CD0061; phage(gi21231545)             3e-30               MPVDFLTTEQEQNYGCYVAEPNDVQLVRYFHLDERDLAFIYQRRGKHNRLGIALQLTTARFLGTFITDLTQVLPGVQHFVAVQLNIRRPEVLSRYAERDTTRREHTAQIKEYYGYHEFGDFPWSFRLKRLLYTRAWLSNERPGLMFDFATAWLLQNKILLPGATTLVRLVSEIRERANQRLWKKLAAIHYLTELNGTKKRLLDDAPEHIITGPWKRLVYDAEGRIQRAGYSLCLLERLQDALRCRDIWLKNSDRWGDLREKLLQGEEWQAQRVLVCRALGHPTDGHKGVQQLAVQLDETWRAVASRFEGNTEVHICNDGKYPSLTISSLEKLEEPLSLLRLNNRVRQLLPPVDLTELLLEIDARTGFTREFTHVSESGARAQDLHISLCAVLMAEACNIGLEPLIKHNIPALTRHRLSWMKQNYLQAETLVSANARLVDFQSTLELARRWGGGEVASVDGMRFVTPVKTVNSGPNRKYFGSGRGITWYNFVSDQYSGFHGIVVPGTLRDSIFVLEGLLEQQTGLNPVEIMTDTAGTSDIIFGLFWLLGYQFSPRLADAGEAVFWRVDKSANYGALDELARGCADLSKAENQWDEMMRTAGSLKLGTIHASELIRSLLKSSRPSGLAQAIMAVGRVNKTLYLLNYIDDEDYRRRILTQLNRGESRHAVARAICYGQRGEIRKRYREGQEDQLGALGLVTNAVVLWNTLYMQEALSWMRSNGEETRDEDIARLSPLMHGHINMLGHYTFTLSDDILNGELRALNFNLNNELSP
complement(53246..53626)           PROPHAGE_Xantho_33913: ISxcc1 transposase; YPA_CD0060; phage(gi21232565)             3e-32               MVERYPRDGFFKVFQILRRWGYVWNHKRVHRIYCLLKLNIRRKGKQRLPARTPSPLAVPERLNLSGAVDFMHDALICVDDYNREKLAIEIDLNLPTQHVIRVLDRIVVNRGYPVMGFEVQWDENVR
54615..55535                       PHAGE_Cronob_vB_CsaM_GAP32: adhesin; YPA_CD0062; phage(gi414087345)                  1e-13               MATGVDSVAIGPLSKALGDSAVTYGVSSTAQKDGVAIGAKASASDTGVAVGFNSKVDAQNSVAIGHSSHVAADHGYSIAIGDHSKTDRENSVSIGHESLNRQLTHLAAGTEDTDAVNVAQLKKEMAETLENARKETLAQSNDVLDAAKKHSNSVARTTLETAEEHANKKSAETLVSAKVYADSNSSQTLKTANSYTDVTVSNSTKKATRESNQYTDHKFSQLDNRLDKLDKRVDKGLASSAALNSLFQPYGVGKVNFTAGVGGYRSSQALAIGSGYRVNESVAFKAGVAYAGSSNVMYNASFNIEW
55658..55864                       hypothetical protein; YPA_CD0086                                                     N/A                 MGNYMVSDEINRRNNLSDICYGHPIYVGCACINPNYINPQIQRSRVNTARYFEQAAQFDHWPFCFQPC
complement(55861..56049)           PHAGE_Entero_Sf6: gene 56 protein; YPA_CD0063; phage(gi41057344)                     2e-09               MRKWIRQYKEEVSGVTPDNPALTPEQREIQSLRAQIKRLEMEKEILKQAAVLMSEFPIKSLR
56199..56657                       hypothetical protein; YPA_CD0064                                                     N/A                 MGGMAAHWFTYQYAVPFCGRAKTLVTLSNAEGESVLISPQQNTAQDISLFMPRELTVSQGDRVRFTRSDTDRGYVANSLWEVAGFTEDGAVRFRQGDQEKIVDPQKATEDRHIDLAYTLTAYGVQGASERFVIALFGAEGGRKRMATLHLFT
56829..57146                       PROPHAGE_Xantho_33913: ISxac3 transposase; YPA_CD0065; phage(gi21231087)             4e-07               MTQPKQTKRRFSPEFKLEAIEQVVKYQRSTIEVARALELDPSQLRKWIRQYKEEVSGVTPDNPALTPEQREIQSLRAQIKRLEMEKEILKQAAVLMSEFPIKSLR
57170..57577                       PHAGE_Entero_Sf6: putative transposase OrfB; YPA_CD0066; phage(gi41057343)           7e-22               MVELCRLLKITRSVYSASLNFRVDVKRLQLRELHQQSRGAAGSRTLSLLMRQSGYNVVRWLARRLMRECGLASRQPGKPRYRGEREVSLASPDLLKRQFKPSEPNRVWSGYISYIKVNGGWCYLALVIDLYSFHW