gi|71905642|ref|NC_007298.1|  Dechloromonas aromatica RCB, complete genome. [asmbl_id: NC_007298].4501104, gc%: 59.25%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1392710..1392994                   PHAGE_Burkho_phiE255: gp35; Daro_1281; phage(gi134288835)                            4e-14               MTKSELIAQLAERFPQLVAKDADFAVKMILDAMSEALVRGDRIEIRGFGSFALNYRPPRVGRNPKSGEKVSVPAKWVPHFKAGKELRERVDQAI
1393056..1393346                   hypothetical protein; Daro_1282                                                      N/A                 MNVMTVLTWSIRLVIFAFLVVFAAQNTDPVSLRLLPGQAWQAPLVIALLAFFVGGVILGALSLLGVIFRQRREISRLKRAANQAPVVVKAEEPPTV
1393343..1394515                   tetratricopeptide repeat protein; Daro_1283                                          N/A                 MNEFFDYWQLLLIPVFFGLGWAAARVDMRQVVHESRSLPRSYFQGLNFLLNEQPDKAIDSFLEVAKVDSQTVELHFALGNLFRRRGETERAIRMHQNLIDLPDLEERVRLQALSELGQDYLKAGLLDRAEEIFNKLLGSSFEEEAKRNLLEIYQVEKEWLKAVGIARELPDVASHREIAEYYCELAANEIMRSRPDTAREYLDVAMQENRKCVRASLLQGDLLLQEGATTEAIEAWQRIEQQDPAYLALVAQRLLEAYRKLERPAEGIALLSGYLERYPSLDLLEVVYQLVLENEGTEAAYRLVRAELQRNPTLLGLEKLMSARLPLVAPEVRPDVELAKTIIQGYTKRLSRYRCDNCGFKARQFYWRCPACGGWETYPPRRGEEFDQSL
1394525..1395844                   PHAGE_Acanth_1: hypothetical protein ATCV1_Z571L; Daro_1284; phage(gi155371518)      9e-37               MKITVVGTGYVGLVSGTCLAEVGNDVLCLDVDPEKIRILEEGGIPIFEPGLQDMVRRNVAAGRLHFTTDVEKAVQHGTVQFIAVGTPPDEDGSADLQYVLGAARNIGRLMTDYKVVVDKSTVPVGTGAKVHAAIADELQKRGVKTPYSVVSNPEFLKEGAAVEDFMRPDRIVVGAEDEQAIHLMRALYAPFQRNHERLIVTDIKSAELTKYAANAMLATRISFMNELANLAEVLGADIEMVRQGIGSDPRIGYHFLYPGCGYGGSCFPKDVKALIKTAQDDADITLKVLTAVEEANDAQKHILTKKLKARFGDLKGKHFALWGLAFKPNTDDMREAASRELIADLFEAGATVTAYDPVAMHETQRIYGDESRLKYAENPMGALTDADALVIVTEWKEFRSPDFEEIKKALKNPVIFDGRNLYDPKFVRASGIEYFAIGR
1395848..1396786                   PHAGE_Synech_S_CAM1: hypothetical protein; Daro_1285; phage(gi472339598)             4e-20               MSGNLLEKLSQVRLLVVGDVMLDRYWFGEVNRISPEAPVPVVKVERMEERLGGAANVARNAASLGAVSALLSVVGDDEAGRTLGRLLDEGQIDAALHMDRQIDTTVKLRVIGRQQQLLRIDFETTPSHEILQAKLADFEQRVVQADVVILSDYGKGGLTHIAEMIRIARSHDKPVLVDPKGDEWGKYAGATVITPNRSELREVVGRWSSEEELAAKARKLRGELGLEALLVTRSEEGMTLFADDAVHHQPALAREVFDVSGAGDTVIATLAVMIAAGADWDEAIRVANIAAGIVVGKLGTAVVSREELIAAL
1396799..1397797                   PHAGE_Prochl_P_SSM2: putative nucleotide-sugar epimerase; Daro_1286; phage(gi61806184)     4e-32               MYIVVTGAAGFIGSNIVKALNERGITNIIAVDNLTKADKFKNLIDCDIVDYLDKNDFIERIQAGHFDGEIDAILHEGACSDTMETDGRYMMENNYRYSMILLDWCLDQDVQFLYASSAATYGSSGTFKEERQYEGPLNVYGYSKFLFDQIVRQRLAQNPSSQIVGFRYFNVYGPRETHKGRMASVAFHNFNQFRADGKVKLFEGSHGYPDGDQQRDFVFVGDVAKVNLFFLDHPEKSGIFNLGSGRAQSFNDVAVAAVNGCRKARSESALSLEELRAQGLLEYVAFPEALKGKYQAFTQADLGKLRAAGYDAPMATVEEGVSQYIEWLQRNV
1397790..1398689                   PHAGE_Lactoc_P087: putative cysteine synthase; Daro_1287; phage(gi229605000)         2e-50               MYKTLQDFVGNTPLVRLVRIPGADNDKRGNVILAKLEGNNPAGSVKDRPALSMIVHAEARGDIKPGDTLIEATSGNTGIALAMAAAIKGYRMILVMPENQSVERRQSMRAYGAELVLTPKDGGMELARDVADKMRDEGKGIILDQFANPDNPLAHYEGTGPEIWRDTDGKITHFVSSMGTTGTIMGTSRFLKEANPAIEIVGCQPEDGSQIPGIRKWPEAYLPKIFDKTNVDRVEYVSQADAEAMTRRLAMEEGIFAGISSGGALAVALRLSQQLENAVIVSIICDRGDRYLSTGVFPA
1398686..1399471                   PHAGE_Brucel_Tb: putative DNA-PolB associated Exonuclease; Daro_1288; phage(gi418487737)     1e-09               MKPVLIFDIETIPDVAGLRRLNDLPGELSDDEVAELAFQQRRAKTGNDFLQLHLQRVVTISCVLRTSEGLKVWSLSEPDLNEGAIIQRFFDGIEKFTPQIVSWNGGGFDLPVLHYRGMLHGVAAPRYWDMGDGDYADSRDFKWNNYISRYHTRHLDLMDLLALYNGRANAPLDDLAKLFGFPGKLGMDGGKVWEAWQAGKIAEIRDYCETDVINTYLVYNRFRRLRGELTAEEEVAEGEFVKAQLAKIGTPQWQEFLAAWQ
1399532..1400080                   inorganic pyrophosphatase; Daro_1289                                                 N/A                 MALNNVPSGKSLPDDFNVIIEISAHSEPVKYEVDKESGAIFVDRFMSTSMHYPCNYGYIPHTIAGDGDPVDVLVVAPFSLPPGVVVRCRPLGQLSMTDEGGNDAKLLAVPVDKLTPLYKDAKSIEDMPELLRKQISHFFEHYKDLEPGKWVKVNGWEDIDAARKEVMEGVQRYNDAKDKPNY
1400087..1401703                   PHAGE_Parame_NY2A: hypothetical protein NY2A_B116R; Daro_1290; phage(gi157952420)     2e-12               MLRIAVAQFNATVGDLTGNVERIIKCASEAKVRGAQVLLTPELALCGYPPEDLLLRPDFYRACQRALDNLVSRVEGIAVVVGHPEEHEGRCYNAATVIENGRSKAVYRKMRLPNYEVFDEKRYFEPGTEACVVTLAGVRCGINICADIWEAGAAELAHEAGAELLLVLNASPCHLEKHQQRIQVLGDRIDATGIPAVYCNLVGGQDELVFDGASFALDARKNCCMRLPQFEEALGIVDFDAGRLHSDDMADELSLEAEAYKALVVGVRDYIGKTGFKGAIIGLSGGIDSALTLCVAVDALGADKVRAVMMPSPYTAQMSLDDSREMIRVLGVQYDEIAIAPAMEVYGAMLDPLFAGLPADTTEENIQARIRGNILMALSNKTGALVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDVYKTLVYRLSVYRNTLCQGDPVIPENIIVRPPSAELKPDQTDQDSLPPYEILDAIVRAYMEEDRSPREIIAAGLQEADVRRVVRLLRIAEYKRRQAPIGIRITPRGFGKDWRYPITNRYADEF
1401728..1402066                   nitrogen regulatory protein P-II; Daro_1291                                          N/A                 MKKIEAIIKPFKLDEVREALSEIGISGLTVTEVKGFGRQKGHTELYRGAEYVVDFLPKIKIEIVVNSNNVEPAIDAIIKAARTGKIGDGKIFVMPVEQVVRIRTGETDEAAV
complement(1402119..1402889)       Smr protein/MutS2 C-terminal; Daro_1292                                              N/A                 MIDPEDLAAFQAAVADIKPLPPVNRVHLTKPPRPVSARPLASEKSPPAQKKRRNETLPAHWNSAAESPTTNPDSKLEPDLAAFRAAMAGVQPLPSPNLVQHGTCPPPPRPLQHIADEQAALHESLHGHIGLQDRLEGGDEPHHLRTGLAQNVLRDLRRGRWVVQNEIDLHGLNRDEARQLLATFLAICLHREQRCVRVVHGKGLGSPQKLSILRQLVRGWLAQREEVLAYCQAKPHDGGEGALLVLLRAPKKQRAT
complement(1402896..1403858)       PHAGE_Lactoc_949: putative ribonucleotide diphosphate reductase alpha subunit; Daro_1293; phage(gi327197952)     2e-22               MPQNVRHNPLIILGSGPAGYTAAVYAARANLKPVLITGMAQGGQLMTTTEVDNWPAAADGIQGPELMANFEAHARRFETEIVFDHIHTTQLTEKPFTLIGDAGTYTCDALIIATGASAMYLGLPSEETFAGKGVSACATCDGFFYRNKPVAVVGGGNTAVEEALYLANIASHVTVIHRREKFKAEKIMQDKLFQREKEGKVTILWNSTLDEVLGDDSGVTGLSIKNVKSGETQKVDVHGVFIAIGHKPNTDIFAGQLEMDNGYLVTQAGRNGNATQTSIPGIFAAGDVQDQIYKQACTSAGSGCMAALDAERYLDNLGHA
1403988..1404650                   cyclic nucleotide-binding: regulatory protein, Crp; Daro_1294                        N/A                 MATTPCGLSLVVLRNVPLFSGLDDVELEKLSKVSGRKRVERGASVVRAGDSTDSLYILLSGRAKVTNTDEDGREIILAWLGPSEFFGEMGLIDGSPRSANVVAAEPCELLFLSKESLQRCLQDNFQVTQKLMKTLVLRLREADRKIESLALLDVYGRVARLLLDMSEVVDGRRIIKKKMSKQDMAKMIGASREMVSKVMRDLELSGYIRIENDLTVIPGA
1404653..1406959                   PHAGE_Mycoba_Omega: gp203; Daro_1295; phage(gi29566938)                              6e-90               MGARAVDRRAAPSPLPEKIGNLLQESRWLGLGAIALFLIMALWGFSKEDPGWSHAVISQTMHNPAGRAGAWIADLMLYIFGLSAWWWIVLLGMFVWWGFRRFNSPEEHKQHPLFIALGGFSFLLLASSSLEALRFYSMKAELPLAPGGMLGIELGRVLSTQLGYTGSTLLLLSIMAAGWSIFAGMSWLWAFEQLGVLLETFVGFFYGRVDAWRDRQIGKEVAQQREVVVEEEKRRVELHEPIIIETPPPEVPVSKKAEARIEREKQVALFPEAIFGGQLPPLHLLDPAPPATETVSAETLEYTSRLIERKLADFGVQVKVLAAMPGPVITRYEIEPAVGVKGAQIVNLARDLARALAMVSIRVVETVPGKSCMALELPNPKRQTVKLSEIISSKPYNDMTSPLTVCLGKDIGGLPVVADLAKTPHLLVAGTTGSGKSVGVNAMILSMLYKAEPDQVRLIMVDPKMLELSIYEGIPHLLAPVVTDMKQAANALHWCVTEMEKRYKLMSAMGVRNIAGLNTKIRDAEKRGEHIPNPLTLTPETPEPLKTMPFIVVIIDELADLMMVVGKKVEEQIARLAQKARASGIHLVLATQRPSVDVITGLIKANIPTRLSFQVSSKIDSRTILDQMGAEALLGQGDMLYLAPGTGYPTRVHGAFVSDDEVHRVVEHLKATGAPEYIEDILTGSGGDEEEGGESGEGGGDAESDPLYDQAVDIVLKNQRASISLVQRHLRIGYNRSARLIEAMEKAGLVSTMDGRGGREVLMKKPAE
1407027..1407653                   Outer membrane lipoprotein carrier protein LolA; Daro_1296                           N/A                 MRMNIVQKILSATCFALLPLLAHAGAVDQLHDFLKNTRTLKAEFSQAVISRNGRKPQQSSGTIAISRPGKLRWEIVKPFPQLVVGDGEKIWIHDPELQQVTVRKAGQAIGSSPAALLSGNNDLEKNFTLKDAGEAEGMAWVDATPKAGDSGFEKVRLGFSGGDLRAMELFDSFGQTTQIRFSKIERNPALPAATFKFTPPAGADVVGE
complement(1407666..1408244)       hypothetical protein; Daro_1297                                                      N/A                 MPSFSALLNEIRHCQLCAEHLPLGPRPVLQAARSARILVAGQAPGRKVHASGVPFDDASGDRLRQWLGVSREIFYDPARIAILPMGFCFPGTGKSGDLPPRPECAPAWRQRVLAELGQIEMTLVIGQYAQAYHLPDATGNLTDTVRDWRRHWPAVLPLPHPSPRNNLWLSRNPWFEAEVLPALRQRVAEVLG
1408462..1409775                   PHAGE_Vibrio_vB_VpaS_MAR10: putative DNA polymerase III; Daro_1298; phage(gi428782157)     7e-13               MSDLFSSNAVDRNAPLAEQLRPLIPDEVIGQQHLLGPGKPLRLAFESGQPHSMILWGPPGVGKTTLARMMATQFKCEFIALSAVFSGIKEVREAVVQAEMWRGQGKRTILFVDEIHRFNKAQQDGFLPFVESGLFTFIGATTENPSFEVNSALLSRASVYVLKSLDEAEMGTLFDRACDRALADLSFDSGARERLIGLADGDARRLLNLLEQARTAAHAAGIAAVDGAFIESTMAQNLRRFDKGGDAFYDQISALHKSVRGSSPDGALYWFCRMLDGGADPRYLARRIIRMAWEDIGLADPRAMQIANDAAETYERLGSPEGELALAQAVTYLAVAAKSNAGYNAYNAARAFVKQDGSRPVPNHLRNAPTKLMKELGHGKAYRYAHDEPEAYAAGERYLPDGMSEPGWYAPTPRGLEGKIGEKLAHLRDLDRKAGKK
1409781..1410350                   hypothetical protein; Daro_1299                                                      N/A                 MVQTVALSAGLAWASGLRLYLVVFLAGLLSTFGYLHLPETLAVLHNPLVIVVAGIMALAELIADKVPAFDSLWDSFQTFIRIPSGALLAAFAMGDVDPSWTVAAGLIGGTITAGTHFAKAGSRLAINTSPEPFSNWIASFGEEGMVLGGLWTMLASPLVFLGLLAIFLIIAGLVLVKLWGVVGRLFRRV
1410400..1411683                   seryl-tRNA synthetase; Daro_1300                                                     N/A                 MLDIQQLRSNLDAVAEGLAKRGKPIDFSEFSALEAERKTLQTRTQDLQAQRNSLSKQIGMLKGKGEDASEVMAQVGSIGDELKASEARLAELLTQFNAILAALPNIPDDSVPVGSDETGNVEIKRWGTPRVFDFEVKDHTDVGEALGQLDFGTAAKISGARFSLLKGGLARLHRALAQFMLDTHTAEHGYTELYAPYLVNAASLYGTGQLPKFEEDLFKVLRGDQDPLYLIPTAEVPVTNIVRDEILSAEALPLKFVCHTPCFRSEAGSGGRDVRGMIRQHQFDKVELVQVVHPEKSAEAHEELTRQAEIILEKLELPYRRMALCSGDMGFSAAKTYDLEVWLPAQNTYREISSCSNFGAFQARRMQARFRNDKNKTELCHTLNGSGLAVGRTLVAILENNQNADGSVTIPAVLRPYMGGLEVLSAA
complement(1411728..1413263)       PHAGE_Yersin_Berlin: Internal virion protein D; Daro_1301; phage(gi119637782)        2e-05               MYWIKRLLLLTASLIAAGCGEVGPLPFPTPAQHDLVVLTRPGLLTYSTDDNGNPAGIEYDLTQAFAQELGVGVRYVVVAPEELEAQLTESKYHLAAAWLSPMANSAIQSTPAIFQTRDILAQHEASLALTERSQLTSKTVHVMAGTRQAKTLASLAKEIPGLKVVEVGQGDILDLLEKLGNRQIEYVAIDEGFEDIANQYVPNLRTTLALSETRPVVWLLGQHPNAELKARLDTFIERVQHDGTLARLEDRYLGHVRRLEQGDIIKFLGEIETTLPKFRKYFQAAQALTGIDWRLIAAVAYHESHWDPNATSYTNVRGIMMLTEDTADHLEVSNRLDPSESILAGARYINMLKEQLPEETEEPDRTWLALAAYNIGPGHFNAARTLAKQLKADPNTWYEMKRILPKLAQPKVYQQLKTGRARGGEAVILVENIRSYYDILQRNTAPFGPTPAAAESLKRLVAEVEGRRKTYVRKMAASKAINATGTDTSTAAFRLPTIESGKYPARPAENE
1413291..1413378                   tRNA                                                                                 N/A                 GGAGAGGTGGCAGAGTGGTCGAATGTACCTGACTCGAAATCAGGCGTACTGCAAGGTACCGTGGGTTCGAATCCCACCCTCTCCGCCA
1413450..1413461                   attL                                                                                 N/A                 TCTTGGGAACAA
1413492..1415189                   PROPHAGE_Escher_Sakai: putative integrase; Daro_1302; phage(gi15834496)              3e-25               MIQKFMAYPPGMELHGSTWRVNKRVPLDLIRTYPQQYPKGLIRFNTGESDKPKAGVKAWSWLCEIEDEFQRVRETGSKHRLQLPEEEAELIIRRIIHSRLSADEAIRVAGVDDHTFAKLDEENDESRQKEQLAIARGVLTANATDLAHEWLFAHGYDLPHDSVEFRQFALRLFRRLSEATKIADSRQRGEWVDTPPVPERETKQVAPKLSEVIEHFIGKQDDTVPMFKKFRPTLGLFLEYVGDKSVDQLRQREIDEYFDLLCKLPPRWADAKRKLELSIRDLAKIEWPVCISKKTFEDGYMAAFRPFLVDAVRVFQDQGFPPHLTIAGIKYSGEREETENEQRAMRQDELARLFTGPEYVSFANDPECRHYYWLPLVGLYTGARINEICQLNPQCDIRQEQGVWIFDINEKTEGDERVKKTVKNASSRRKVPIHSELIRLGFLEYVDSVKEQGAKLLFPSWNPSSAGRAAGVAERWFRKLIKATGLRDETPQARLVGFHAFRHTFLNNAMNNDISFAEWLTGHAPEGVSKVVAKYQGEAEITKKAQIMESIRFTVEPPRASWLVN
1415224..1416813                   PHAGE_Acinet_Bphi_B1251: putative restriction-modification protein; Daro_1303; phage(gi423261981)     2e-10               MNNEVVLGTQEKNRMTINLQDLESRLWSAADQLWANTGLKPSEFSNPVLGLIFLRYAEKRFHEAEAKLVAGGLEVSDIEKFDYQAEGALYLPETARFTYLLDLAEGHDIGKAINEAMAAVEADNDELKGVLPRSYGKVENRVLVELLRLLNGLGEIEGDAFGKIYEYFLGKFALAEGQKGGVFYTPTSIVKLIVEIIEPFHGQIFDPACGSGGMFVQSAMFVGRHKKRAAEELTVFGTEKSNDTVKLAKMNLAVHGLSGDVRESNTYYEDPHKAVGRFDFVMANPPFNVSGVDKERIKDDPRFPFGVPTTDNANYLWIQLFYSALNNTGRAGFVMANSAGDARGAELEIRKKLILSGGLEAIVSVGPNFFYTVTLPCTLWFFDKTKAKRERKDKVLFIDARGYYRQVSRAIRDFLPEQVEFLSNIVRLWRGEAVETEAGSGEMMTEQFPEGAYRDIVGVCKVATLADIEAQGWSLNPGRYVGVVHHSAEDFDFEERIASLTEEFATLNNEASDLSQKIEMDLQNLLSWN
complement(1417170..1417997)       PHAGE_Entero_Sf6: putative transposase OrfB; Daro_1305; phage(gi41057343)            7e-28               MIDKAHDLPVVRQVQLLELSRSSVYYQPQPIPEDDLRLMRRIDELHLEYPFAGARMLRDMLKLEGHGIGRKHVGTLMKKLDIQAIYRKANTSRRNQAHRIYPYLLRDLAIDRPNQVWAMDTTYIPMRRGFVYLSAVLDWATRRVLAWRLSNSLTSDPCVDALEEAIMKYGRPEIMNTDQGSQFTSSAFIGLLQESTIQVSMDGKGCWRDNVFVERLWKSVKYEEIYLHGYDTVSEVRQALARYFDFYNRRRPHSTLDGQTPDTAYFNQPLLAAAA
1431549..1431560                   attR                                                                                 N/A                 TCTTGGGAACAA