gi|67459862|ref|NC_007111.1|  Rickettsia felis URRWXCal2 plasmid pRFdelta, complete sequence. [asmbl_id: NC_007111].39263, gc%: 33.19%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
17123..18175                       PHAGE_Sodali_phiSG1: transposase; RF_pd41; phage(gi89886005)                         5e-35               MNNKNIPKDYSEVSVADTKASNRHHEQVDLDSHNTSERPRHDALIRKALENPLVAKEFFEMHLPKEIKAMFSSHTLKMEKESFVEADLKHSISDILFSAKFKDNTGYLWVLLEHQSTPDHFMAFRLFKYMTDIASRHLTLNPKSKHLPFVYPLVFYNGKKKYNAPKNIWDLCQHKELMQDIWTKDHKVVNVHDIPDEELKKKAWAGILQFFMKHIHERDLLKRWYEVADLLPEFAKLNIGIDYLELILTYTLIKIEKSDKIELEKLLKSRLNTEQGEKLMTSLAHHWEQQGVEKGMQIGEAKGMQIGRNEGKHEKTIEVAKNMLSNNYSIPEVSRITGLSIAEINDLLKS
complement(18225..18842)           PHAGE_Acanth_mimivirus: putative ankyrin repeat protein; RF_pd42; phage(gi311977464)     2e-11               MHHLIDQLKSKNNIFYIRALVPMIVLCVLLISKTVYGYDTKLEHLCKAISNNNIDLVKQAQQKSQYNQRCIQERETPLILAISNNNIKVVQMLLDFGVDIEQEGRYGGAALYNAICHDTNIVKLLIKHGANINKRLSEGSRETPLIKATKCFENGSIANTEHIKILLKYGADINAKDVNGITALKMAEMQNDQSAINLLRSSGKK
complement(18907..19674)           putative conjugative transfer protein TraD_F; RF_pd43                                N/A                 MLRITTYSSNSEFAKAFENTAVAGMINNSAPETSTGVQATLSKNIAALKHLAPIRDFSIRQWCNDEENKSWLFLTALPSQRATLSPLLSAWISVALKSLMSRDIGSTVENLWFIMDELPALGKINSLNTALAESRKYGGCFVAGIQNIFQLDKIYGSAAANDLLDLFNSKFIFRVGDQQTAHRSAMMLGEQEIRKTQESLSYGSNTIRDGVNINTIEQKKMQVLPAEIMSLPNLSCFVKLAGHYPISKLKMKWQN
complement(19681..20610)           putative conjugative transfer protein TraD_F; RF_pd44                                N/A                 MNIQEQGRFTRGAQIFAHQIRMLTQGITNALTVSLTASCMWLIFRILQKINILSLYYYCIECYVQLKLAVGQYFYDISQIGITFYDVKRQEWIYRSAEDFIHKFWYVTKHGTQITSFGSWLAGSAAFEVLGVFALTMPGITIFFWYRGIKTIGSQKLRGMDYVQASELTKILSKEKVASNIKFAGLPIVKDSERQHILITGTTGTGKTNMLNELLPQIRSNNEKAIIVDMTGSYVNKFYDPSNGDIILNPFDSRTSNWLPWNDIVDTEDFDDLASHFSSNNGMGRASFFDRTAELVLAEALKKYAVSRD
complement(20622..20900)           hypothetical protein; RF_pd45                                                        N/A                 MLFQILPIFWIIAICAKIPMTKKLIMKFPIISKIWLMLLKFIKDLDIKGMYSSPNNLTGFSSDMGNHRRDDERSTSPSYFYLPYNIYYESDK
complement(20936..21988)           PHAGE_Glossi_virus: hypothetical protein SGHV062; RF_pd46; phage(gi168804078)        6e-06               MSDQYAATSSRLNSLSSKDSMLRTMSGQQALELASRLIAEEARSIGISEQEQMQFKDAVSTDSTTTDNTIMRNNKETATSNNASVGFNAFGLGGASARVSASNNTSSSSEEVLSKKQTINNVLEKTKSALQEGRLNSFNSDTQSLARTLSQNYQEQESIGREISDAISAQDQLSRSRQYVAQNAATIDRNMNEPVLNAIIDSNIPGVSSKEQAARWARTHIHEAASIANSVMPVDNIALDNGRHLSGISSDVKNIPMRSEQHLKNEYQVQTGKIEASADKINNKQELAYQSVETRLNNNLSNSVKESYNNLNNTAQLVEQKGKKIEDQYEDTSDSTVKRTLDEIGKNSRL
complement(22027..22494)           conjugative transfer protein TraG; RF_pd47                                           N/A                 MVLPLTCLVGGFKFFQFWCNFTIWVSSWPIFYSLVHCLGMLSLSGKVSVFGGNGMSILSQGSYSEYALNTYATYQMLECLVPPLSWALFKACSHGMSMLAGQFSPLSVASSVAAGIADNNLSMDNVSIGNRTISQQNLAPSLMMADSSLQKALIH
complement(22835..23704)           PHAGE_Spirop_3x: hypothetical protein SkV1VCR23x_ORF3; RF_pd48; phage(gi160688404)     2e-11               MDMAIEYPAYGQLRVSNELKKSGILVSPGEVRSIWLRNDLNNISKRLKALEAKMAQDGIVLTEAQLQVLEKRRNEKEAHGEIETQHPGYLGCQDTCYVGNFKGIGKVYSQVFIDSYTRVVDAKLYADKTAITAADMLNDRVLPWYETQGIPMLRILTDRGSEYKGNIEHHAFELFLSIEGIEHTTTKAYSPQTNGMCERFNKTMKQEFFDTAMRKKIYTDLDDLQLDLDIWLEHFNNERLHSGKYCYGKTPMQTFQDSKKLAIEKNNEILYLEYSSDSQNLTDNQVQNL
complement(23727..23918)           PROPHAGE_Shewan_MR-1: ISSod13, transposase; RF_pd49; phage(gi24375047)               6e-13               MNLNQKIIKSKLGLLELAKSLGSISSACKAMGYSRDSYYRFKELYETGGEEALYEISRRKPMS
23969..23982                       attL                                                                                 N/A                 ATGTAAGATCAAAT
complement(23988..24758)           hypothetical protein; RF_pd50                                                        N/A                 MKRVCMSKLLGGWSMSLTRYPFNEFDYIMYGMVTNLEELTTGSMASPGWSPENEQKPDNNPCFTGKRLWVYGGGGCAPEEKPSSMNDVSRIISATINNGWDGVDFDDECNMNTAFVIKTMEKLKENSKETSFGFIAGYSYNHPNTEKGKKITDKVKAIIASGQCDRLVHYCYAAAMWNQNDIINNVKQALVQSISYGIEQDKIVLALTTLGLTDWNLNYFLDQIIDLNLGGLFIWRYDELTPNHYKIIKKRLNKLY
complement(24893..25384)           PHAGE_Synech_S_SSM7: heat shock protein; RF_pd51; phage(gi326783835)                 9e-08               MFNKLMEVLMSFNLPRIRNKSELQHHTNKQSYVDDVFNNFFNEIASFSYPTHYNNKILSPRTDITENESEYHLEVELPGVTQDNIDLKIDSNILTIDGKKEQSTEKKDHNYHMKERYYGSFSRSISLPSNVDEEHVTANFKDGILSIKIPKKEQSKAKKIKIS
complement(25428..26018)           small heat shock protein; RF_pd52                                                    N/A                 MNTYLSEITNLIYYINLKEVCMLYNNIKSYLLSGITVILLTGHPVIAADNVSKPDNKSQTAYLQHPPDLRPFSIFDYYLDNMFEHKLSAYSSSAIRTKFITQDKQYILVLEVPGYDKSQIKVKVNSNKLFITGNVEQNNKSEASDDYTKRNFNYVVSLYEDVDQNNISSNLKNGILTITLPRIEVKEKDAKEIPIQ
complement(26075..26617)           DNA polymerase III, epsilon subunit-like protein; RF_pd53                            N/A                 MIRLKFLEEVDIIIAHNAAFDRPFFDKMFPEVITKVWGCSRVDIDWKAEKIESHKLEYLTYKYNFFYEGHRAVIDCRAGLHLLAQTLPITKTLVLKQLLNNCHKTRFNVWVHNAPYDSKDLLKSRGYRWSINPQANYKAWMIEVFEDTLETELTFLNSNVYKTPYNIPVQTINPCDRFMG
complement(26644..27336)           PROPHAGE_Escher_CFT073: transposase; RF_pd54; phage(gi26246249)                      2e-75               MVVKVRQDKRIINKSVYVALGIDLEGRKDILGLWISENEEAKFWLGNFTEMKNRGMQDILIACSDNLNGMSEAIGAVFPKTEHQLCIVHQIRNSLRYVSYKDRKELAGDLKPIYTANTEKEALSALEAFESKWSKQYPQIAKSWYIHWDNLMILGYPEEIRKIIYTTNAVESVNSQLRKVTKNKRLFPNDNAVFKSLYLAIDYMTKKWSMPIPNWNAAMAHFLIKFEERI
complement(27405..27911)           PROPHAGE_Escher_CFT073: transposase; RF_pd55; phage(gi26246249)                      3e-23               MCKFLKGYIKENITKRGITMPQKQNAAMNQAIDLLINNDTDVSTLFKEDGLLKELTKHLVEKALQSEMNNHLGYSKYNQSDAQNSRNGYNTKNLITKNGAVEIEVPRDRNSSFEPSLVAKRQRRLDGFDDKVLSLYAKGMSLSDIKLQLQELYGADVSESLIVGLQMI
complement(28325..29398)           hyaluronidase; RF_pd56                                                               N/A                 MNIFSLDTFSYGIIMGYYGPVWSNEVLIEYADFCKKYGYKYFIYAPKMDKLLRDNWNIFFTESRVQELKNIRDTFEEKGVAFGIGLSPLGLNNLKDIEKVEKVLQQKITQINNINPTILGIFFDDINKDSIVPDLGVGQVQVAEYIAQRSNAQNFASVPSYYSNDQILQRVLGPTPESYFADFSQLDQKFSIFWTGEHIMSDGYSQKELDNISNKLGRKVLIWDNYPVNDPTYLKDHLRISGIDRPQELSSWTPSIAFNPMIQPNMSKIPLSTAQCLFSSEKYNKREIYIEKLIELCGKDLAQAIDQNLPYFELNGINRTETSNIKRMKELFSLFAEINEQQYTHEIIKLLGGSQEI
complement(30157..30894)           PROPHAGE_Shewan_MR-1: IS110 family transposase; RF_pd57; phage(gi24375433)           1e-42               MRFVPIKTVEQQDILSIHRVRERLIKNRTALANEIRGLLHEFGFIIPQGINKVMTKLTEILDEGNLSQLGYQTFSELKEEFLDNNKKIKEIEKRLKIITSNLTQYQRLTTIPGLGLITATALIASIGSATNFDNGRQLSAWLGLVPRQHSSGGKDKLFGISKRGDVYLRTLLIQGARAVLNAKIRFTSEEQKSKKDFSKFTQWMFNLSERSGHNKTTVAIANKLARVVFAVLRSGDDYVESKVCS
complement(30891..31190)           PROPHAGE_Shewan_MR-1: IS110 family transposase; RF_pd58; phage(gi24375433)           2e-11               MVGIDIAKRIFQIHGVDKNGNTVLKKKLMREQILTFMANLPKCLVGTEACGGASWAREITKLDHTVKLMAPQFVKPYVKTNKNDQADAEAICEAVADQI
complement(31599..31889)           hypothetical protein; RF_pd59                                                        N/A                 MEINGKKAKIYYSDSASADGPDYAIIDISSKKAKYKKATYDTSNPSSSHSDDHERMELINSSDNSIQDNINVISYSIVSAAANKTDYINTSSKRDR
complement(31938..32141)           PHAGE_Stx2_c_1717: transposase; RF_pd60; phage(gi209447153)                          8e-14               MSVGRKNWLFAGSDSGGHTASIIYSIIKTAKLNHINLWKYLQKVLAIIQDYRANKVEDLLPWNILLD
complement(32198..33313)           PHAGE_Sodali_phiSG1: transposase; RF_pd61; phage(gi89886005)                         2e-30               MTNEEHNQRQQQTDVSTNGDANDTTAERPRHDELFKKVMSEPVAAREFLEHYLPASFKNKINLNSIKIEKESFVTEDLRKRFSDVVYSVSLNKNNIKDSTTGSANNDKAYVYVLIEHQSSSDYWIAFRLWQYMLLLCKRHKDANKNKSNAAAEKDNKLPLICPIVVYANDKLYNAPRSFWELFEDCKTAKEMMGGEYLLVDLQKQSDDEIEQKKHLGMIEYMLKHIKARDILNLWQSLLEKFESSIEIDKENGYIYIKWLLWYSDAKVSEDKQVELAKIIAKHLNKADQEGLMRTIADKYIDEGVQKGMVQGMQIGRNEGMQIGEARGMQIGEAKRTMEVAKNMLNAGSDISFISKVTGLSISELNQLLKS
complement(33326..34489)           hypothetical protein; RF_pd62                                                        N/A                 MNINDVPDSHHKEIARDVYSTISEYSNRYALDATDKNKIANSVYEAHCTLKAWQQRSYAQVATSYTVYQDRQKYLEHKRLADIERESERKTLIEHTQQIKHEILVAKTVSEIFVALEKDQKFFIEQNGNIKYTTFNYKFVDLVEQALEYKEQELLPQLKDAAAEAEQHGVFSTQDILAELKGSKDLAETYKHFDSSLERHHLETQHQQIRKDKVDAKTTDEMLTTIRREHEFFKSLNGKLKYAGQYDSSVLSAISNAKSIEQDKLITNMHNMVVYAKKHGILNDHEILNQFNSNDSQNVLKNLSKTCEKHYMDRHNENIKQLLDDEHVIIGSKKYSCPLKYMKHEMQNDIPSFIDEKQIAATFAKVKAEVKELRLERELEHTMTMRF
complement(34541..35116)           hypothetical protein; RF_pd63                                                        N/A                 MGGSNAADRVNWSQLQFQWRDAIIWPDNDQPGFKAAEVIKDKINKANEHIGFVSVVDPRRLQFGGSTHKDLLPEKWDQEKSSHYIKYLEATGKGGVAHDYLKYDSIMYQDILTSLAMRDERLSKSIKELSDSNNTSDIETIEHRTKLIDDTQNLYEKKALEYSGIAGTNVVYRGHLELMVKNYGESHEKVT
35202..35510                       transposase; RF_pd64                                                                 N/A                 MTYSMSWIILNEKLMAKAYSYDLRIRVIKSLTEGKTIKETSEIYSISRKTIIEWKELKKQTGDVKAKSGYHTGHRRIIRDIEGFKKFIELNFDKTTMELANN
35544..35957                       hypothetical protein; RF_pd65                                                        N/A                 MPNKLGYSYKKNFSSSEKGYWSRNEFILKLKTIDKQDLCILCYAVILKLQHYNWDSLLAYIQCCFLNTESTIKIWNVQSKIISVRCVDILNNNEYMQIVHSGIILLILMLLAICVMPIILLTVCLIMYTIISELKRF
36726..37274                       PHAGE_Salisa_1: hypothetical protein; RF_pd66; phage(gi388570712)                    2e-23               MAKVGYARVSSLGQLLSIQLDKLKDCDKIFQEKKSGLDGTRSALKNALDYVREGDIFIVTKLDRLARSTAHLCKIAEILNQKSVALKVLDQNIDTKDATGRLIFNVLGAIGQFETEIRAERQIDGILKAKERGIQFGKKQYLTKQQLNDLKEKRKQGIKIKNLMQEFNLSKASIYRYLAQEV
37276..37289                       attR                                                                                 N/A                 ATGTAAGATCAAAT