gi|67459793|ref|NC_007110.1|  Rickettsia felis URRWXCal2 plasmid pRF, complete sequence. [asmbl_id: NC_007110].62829, gc%: 33.58%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
31975..31986                       attL                                                                                 N/A                 CAAAAGCTATTC
40689..41741                       PHAGE_Sodali_phiSG1: transposase; RF_p41; phage(gi89886005)                          5e-35               MNNKNIPKDYSEVSVADTKASNRHHEQVDLDSHNTSERPRHDALIRKALENPLVAKEFFEMHLPKEIKAMFSSHTLKMEKESFVEADLKHSISDILFSAKFKDNTGYLWVLLEHQSTPDHFMAFRLFKYMTDIASRHLTLNPKSKHLPFVYPLVFYNGKKKYNAPKNIWDLCQHKELMQDIWTKDHKVVNVHDIPDEELKKKAWAGILQFFMKHIHERDLLKRWYEVADLLPEFAKLNIGIDYLELILTYTLIKIEKSDKIELEKLLKSRLNTEQGEKLMTSLAHHWEQQGVEKGMQIGEAKGMQIGRNEGKHEKTIEVAKNMLSNNYSIPEVSRITGLSIAEINDLLKS
complement(41791..42408)           PHAGE_Acanth_mimivirus: putative ankyrin repeat protein; RF_p42; phage(gi311977464)     2e-11               MHHLIDQLKSKNNIFYIRALVPMIVLCVLLISKTVYGYDTKLEHLCKAISNNNIDLVKQAQQKSQYNQRCIQERETPLILAISNNNIKVVQMLLDFGVDIEQEGRYGGAALYNAICHDTNIVKLLIKHGANINKRLSEGSRETPLIKATKCFENGSIANTEHIKILLKYGADINAKDVNGITALKMAEMQNDQSAINLLRSSGKK
complement(42473..43240)           putative conjugative transfer protein TraD_F; RF_p43                                 N/A                 MLRITTYSSNSEFAKAFENTAVAGMINNSAPETSTGVQATLSKNIAALKHLAPIRDFSIRQWCNDEENKSWLFLTALPSQRATLSPLLSAWISVALKSLMSRDIGSTVENLWFIMDELPALGKINSLNTALAESRKYGGCFVAGIQNIFQLDKIYGSAAANDLLDLFNSKFIFRVGDQQTAHRSAMMLGEQEIRKTQESLSYGSNTIRDGVNINTIEQKKMQVLPAEIMSLPNLSCFVKLAGHYPISKLKMKWQN
complement(43247..44176)           putative conjugative transfer protein TraD_F; RF_p44                                 N/A                 MNIQEQGRFTRGAQIFAHQIRMLTQGITNALTVSLTASCMWLIFRILQKINILSLYYYCIECYVQLKLAVGQYFYDISQIGITFYDVKRQEWIYRSAEDFIHKFWYVTKHGTQITSFGSWLAGSAAFEVLGVFALTMPGITIFFWYRGIKTIGSQKLRGMDYVQASELTKILSKEKVASNIKFAGLPIVKDSERQHILITGTTGTGKTNMLNELLPQIRSNNEKAIIVDMTGSYVNKFYDPSNGDIILNPFDSRTSNWLPWNDIVDTEDFDDLASHFSSNNGMGRASFFDRTAELVLAEALKKYAVSRD
complement(44188..44466)           hypothetical protein; RF_p45                                                         N/A                 MLFQILPIFWIIAICAKIPMTKKLIMKFPIISKIWLMLLKFIKDLDIKGMYSSPNNLTGFSSDMGNHRRDDERSTSPSYFYLPYNIYYESDK
complement(44502..45554)           PHAGE_Glossi_virus: hypothetical protein SGHV062; RF_p46; phage(gi168804078)         6e-06               MSDQYAATSSRLNSLSSKDSMLRTMSGQQALELASRLIAEEARSIGISEQEQMQFKDAVSTDSTTTDNTIMRNNKETATSNNASVGFNAFGLGGASARVSASNNTSSSSEEVLSKKQTINNVLEKTKSALQEGRLNSFNSDTQSLARTLSQNYQEQESIGREISDAISAQDQLSRSRQYVAQNAATIDRNMNEPVLNAIIDSNIPGVSSKEQAARWARTHIHEAASIANSVMPVDNIALDNGRHLSGISSDVKNIPMRSEQHLKNEYQVQTGKIEASADKINNKQELAYQSVETRLNNNLSNSVKESYNNLNNTAQLVEQKGKKIEDQYEDTSDSTVKRTLDEIGKNSRL
complement(45593..46060)           conjugative transfer protein TraG; RF_p47                                            N/A                 MVLPLTCLVGGFKFFQFWCNFTIWVSSWPIFYSLVHCLGMLSLSGKVSVFGGNGMSILSQGSYSEYALNTYATYQMLECLVPPLSWALFKACSHGMSMLAGQFSPLSVASSVAAGIADNNLSMDNVSIGNRTISQQNLAPSLMMADSSLQKALIH
complement(46401..47270)           PHAGE_Spirop_3x: hypothetical protein SkV1VCR23x_ORF3; RF_p48; phage(gi160688404)     2e-11               MDMAIEYPAYGQLRVSNELKKSGILVSPGEVRSIWLRNDLNNISKRLKALEAKMAQDGIVLTEAQLQVLEKRRNEKEAHGEIETQHPGYLGCQDTCYVGNFKGIGKVYSQVFIDSYTRVVDAKLYADKTAITAADMLNDRVLPWYETQGIPMLRILTDRGSEYKGNIEHHAFELFLSIEGIEHTTTKAYSPQTNGMCERFNKTMKQEFFDTAMRKKIYTDLDDLQLDLDIWLEHFNNERLHSGKYCYGKTPMQTFQDSKKLAIEKNNEILYLEYSSDSQNLTDNQVQNL
complement(47293..47484)           PROPHAGE_Shewan_MR-1: ISSod13, transposase; RF_p49; phage(gi24375047)                6e-13               MNLNQKIIKSKLGLLELAKSLGSISSACKAMGYSRDSYYRFKELYETGGEEALYEISRRKPMS
complement(47554..48324)           hypothetical protein; RF_p50                                                         N/A                 MKRVCMSKLLGGWSMSLTRYPFNEFDYIMYGMVTNLEELTTGSMASPGWSPENEQKPDNNPCFTGKRLWVYGGGGCAPEEKPSSMNDVSRIISATINNGWDGVDFDDECNMNTAFVIKTMEKLKENSKETSFGFIAGYSYNHPNTEKGKKITDKVKAIIASGQCDRLVHYCYAAAMWNQNDIINNVKQALVQSISYGIEQDKIVLALTTLGLTDWNLNYFLDQIIDLNLGGLFIWRYDELTPNHYKIIKKRLNKLY
complement(48459..48950)           PHAGE_Synech_S_SSM7: heat shock protein; RF_p51; phage(gi326783835)                  9e-08               MFNKLMEVLMSFNLPRIRNKSELQHHTNKQSYVDDVFNNFFNEIASFSYPTHYNNKILSPRTDITENESEYHLEVELPGVTQDNIDLKIDSNILTIDGKKEQSTEKKDHNYHMKERYYGSFSRSISLPSNVDEEHVTANFKDGILSIKIPKKEQSKAKKIKIS
complement(48994..49584)           small heat shock protein; RF_p52                                                     N/A                 MNTYLSEITNLIYYINLKEVCMLYNNIKSYLLSGITVILLTGHPVIAADNVSKPDNKSQTAYLQHPPDLRPFSIFDYYLDNMFEHKLSAYSSSAIRTKFITQDKQYILVLEVPGYDKSQIKVKVNSNKLFITGNVEQNNKSEASDDYTKRNFNYVVSLYEDVDQNNISSNLKNGILTITLPRIEVKEKDAKEIPIQ
complement(49641..50183)           DNA polymerase III, epsilon subunit-like protein; RF_p53                             N/A                 MIRLKFLEEVDIIIAHNAAFDRPFFDKMFPEVITKVWGCSRVDIDWKAEKIESHKLEYLTYKYNFFYEGHRAVIDCRAGLHLLAQTLPITKTLVLKQLLNNCHKTRFNVWVHNAPYDSKDLLKSRGYRWSINPQANYKAWMIEVFEDTLETELTFLNSNVYKTPYNIPVQTINPCDRFMG
complement(50210..50902)           PROPHAGE_Escher_CFT073: transposase; RF_p54; phage(gi26246249)                       2e-75               MVVKVRQDKRIINKSVYVALGIDLEGRKDILGLWISENEEAKFWLGNFTEMKNRGMQDILIACSDNLNGMSEAIGAVFPKTEHQLCIVHQIRNSLRYVSYKDRKELAGDLKPIYTANTEKEALSALEAFESKWSKQYPQIAKSWYIHWDNLMILGYPEEIRKIIYTTNAVESVNSQLRKVTKNKRLFPNDNAVFKSLYLAIDYMTKKWSMPIPNWNAAMAHFLIKFEERI
complement(50971..51477)           PROPHAGE_Escher_CFT073: transposase; RF_p55; phage(gi26246249)                       3e-23               MCKFLKGYIKENITKRGITMPQKQNAAMNQAIDLLINNDTDVSTLFKEDGLLKELTKHLVEKALQSEMNNHLGYSKYNQSDAQNSRNGYNTKNLITKNGAVEIEVPRDRNSSFEPSLVAKRQRRLDGFDDKVLSLYAKGMSLSDIKLQLQELYGADVSESLIVGLQMI
complement(51891..52964)           hyaluronidase; RF_p56                                                                N/A                 MNIFSLDTFSYGIIMGYYGPVWSNEVLIEYADFCKKYGYKYFIYAPKMDKLLRDNWNIFFTESRVQELKNIRDTFEEKGVAFGIGLSPLGLNNLKDIEKVEKVLQQKITQINNINPTILGIFFDDINKDSIVPDLGVGQVQVAEYIAQRSNAQNFASVPSYYSNDQILQRVLGPTPESYFADFSQLDQKFSIFWTGEHIMSDGYSQKELDNISNKLGRKVLIWDNYPVNDPTYLKDHLRISGIDRPQELSSWTPSIAFNPMIQPNMSKIPLSTAQCLFSSEKYNKREIYIEKLIELCGKDLAQAIDQNLPYFELNGINRTETSNIKRMKELFSLFAEINEQQYTHEIIKLLGGSQEI
complement(53723..54460)           PROPHAGE_Shewan_MR-1: IS110 family transposase; RF_p57; phage(gi24375433)            1e-42               MRFVPIKTVEQQDILSIHRVRERLIKNRTALANEIRGLLHEFGFIIPQGINKVMTKLTEILDEGNLSQLGYQTFSELKEEFLDNNKKIKEIEKRLKIITSNLTQYQRLTTIPGLGLITATALIASIGSATNFDNGRQLSAWLGLVPRQHSSGGKDKLFGISKRGDVYLRTLLIQGARAVLNAKIRFTSEEQKSKKDFSKFTQWMFNLSERSGHNKTTVAIANKLARVVFAVLRSGDDYVESKVCS
complement(54457..54756)           PROPHAGE_Shewan_MR-1: IS110 family transposase; RF_p58; phage(gi24375433)            2e-11               MVGIDIAKRIFQIHGVDKNGNTVLKKKLMREQILTFMANLPKCLVGTEACGGASWAREITKLDHTVKLMAPQFVKPYVKTNKNDQADAEAICEAVADQI
complement(55165..55455)           hypothetical protein; RF_p59                                                         N/A                 MEINGKKAKIYYSDSASADGPDYAIIDISSKKAKYKKATYDTSNPSSSHSDDHERMELINSSDNSIQDNINVISYSIVSAAANKTDYINTSSKRDR
complement(55504..55707)           PHAGE_Stx2_c_1717: transposase; RF_p60; phage(gi209447153)                           8e-14               MSVGRKNWLFAGSDSGGHTASIIYSIIKTAKLNHINLWKYLQKVLAIIQDYRANKVEDLLPWNILLD
complement(55764..56879)           PHAGE_Sodali_phiSG1: transposase; RF_p61; phage(gi89886005)                          2e-30               MTNEEHNQRQQQTDVSTNGDANDTTAERPRHDELFKKVMSEPVAAREFLEHYLPASFKNKINLNSIKIEKESFVTEDLRKRFSDVVYSVSLNKNNIKDSTTGSANNDKAYVYVLIEHQSSSDYWIAFRLWQYMLLLCKRHKDANKNKSNAAAEKDNKLPLICPIVVYANDKLYNAPRSFWELFEDCKTAKEMMGGEYLLVDLQKQSDDEIEQKKHLGMIEYMLKHIKARDILNLWQSLLEKFESSIEIDKENGYIYIKWLLWYSDAKVSEDKQVELAKIIAKHLNKADQEGLMRTIADKYIDEGVQKGMVQGMQIGRNEGMQIGEARGMQIGEAKRTMEVAKNMLNAGSDISFISKVTGLSISELNQLLKS
complement(56892..58055)           hypothetical protein; RF_p62                                                         N/A                 MNINDVPDSHHKEIARDVYSTISEYSNRYALDATDKNKIANSVYEAHCTLKAWQQRSYAQVATSYTVYQDRQKYLEHKRLADIERESERKTLIEHTQQIKHEILVAKTVSEIFVALEKDQKFFIEQNGNIKYTTFNYKFVDLVEQALEYKEQELLPQLKDAAAEAEQHGVFSTQDILAELKGSKDLAETYKHFDSSLERHHLETQHQQIRKDKVDAKTTDEMLTTIRREHEFFKSLNGKLKYAGQYDSSVLSAISNAKSIEQDKLITNMHNMVVYAKKHGILNDHEILNQFNSNDSQNVLKNLSKTCEKHYMDRHNENIKQLLDDEHVIIGSKKYSCPLKYMKHEMQNDIPSFIDEKQIAATFAKVKAEVKELRLERELEHTMTMRF
complement(58107..58682)           hypothetical protein; RF_p63                                                         N/A                 MGGSNAADRVNWSQLQFQWRDAIIWPDNDQPGFKAAEVIKDKINKANEHIGFVSVVDPRRLQFGGSTHKDLLPEKWDQEKSSHYIKYLEATGKGGVAHDYLKYDSIMYQDILTSLAMRDERLSKSIKELSDSNNTSDIETIEHRTKLIDDTQNLYEKKALEYSGIAGTNVVYRGHLELMVKNYGESHEKVT
58768..59076                       transposase; RF_p64                                                                  N/A                 MTYSMSWIILNEKLMAKAYSYDLRIRVIKSLTEGKTIKETSEIYSISRKTIIEWKELKKQTGDVKAKSGYHTGHRRIIRDIEGFKKFIELNFDKTTMELANN
59110..59523                       hypothetical protein; RF_p65                                                         N/A                 MPNKLGYSYKKNFSSSEKGYWSRNEFILKLKTIDKQDLCILCYAVILKLQHYNWDSLLAYIQCCFLNTESTIKIWNVQSKIISVRCVDILNNNEYMQIVHSGIILLILMLLAICVMPIILLTVCLIMYTIISELKRF
59842..59853                       attR                                                                                 N/A                 CAAAAGCTATTC
60292..60840                       PHAGE_Salisa_1: hypothetical protein; RF_p66; phage(gi388570712)                     2e-23               MAKVGYARVSSLGQLLSIQLDKLKDCDKIFQEKKSGLDGTRSALKNALDYVREGDIFIVTKLDRLARSTAHLCKIAEILNQKSVALKVLDQNIDTKDATGRLIFNVLGAIGQFETEIRAERQIDGILKAKERGIQFGKKQYLTKQQLNDLKEKRKQGIKIKNLMQEFNLSKASIYRYLAQEV