gi|67458392|ref|NC_007109.1|  Rickettsia felis URRWXCal2, complete genome. [asmbl_id: NC_007109].1485148, gc%: 32.45%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
320871..321293                     PHAGE_Pseudo_1: putative polyphosphate hydrolase; RF_0305; phage(gi189490476)        2e-06               MKDISSWKEKFEVCVYAKKLLDKLEDLNTKVKNPVDIEEVKKGIYYARKYHGSQMRQSGDPYYSHPIEVTIMLAEFVAEEVPKLFTTIMLQAALLHDTIEDTELTEEMINDIFGAEVAVNTGRKMIQIFNKHRLKNDTVS
complement(321311..322111)         PHAGE_Pseudo_F10: DNA replication protein DnaC; RF_0306; phage(gi148912818)          5e-06               MNLQHQRIEELCHSLNLMQIAENYLDIAQSSSKEDSSYTDFLESILKTELLARQHRSKSILTKMAGFPAIKTLDDFDYDFATGIKHKVLEGLRSLSFVERQENIILLGPSGVGKTHIAIALGYAATQCGIKTKFTTAADLMLILNAGLNQGNLDSIFKRVILPYKLLIIDEFGYLPLKPEQANLLFQVIAKRYEKGSIILTSNLPFGQWHNSLAQDSALTAAILDRLLHHSTILNIKGDSFRLKDKKKTGLVPIEIINKQEDNFMT
complement(322108..322551)         PROPHAGE_Escher_CFT073: transposase; RF_0307; phage(gi26248360)                      5e-23               MVLGIHRFNKGMLDFAKHYSFRLKVCRPYRAQTKGKVERFNRYIRESFYNPLVTKLKTSELVLDVDTANSEVLKWLRDTANLRVHRTTGAIPAERLKLERNHLQPLPLDYSGSHPTVLEIMRDKGERFSTVSLQHSLCIYQSILEAL
complement(322526..323137)         PROPHAGE_Escher_CFT073: transposase; RF_0308; phage(gi26248360)                      8e-56               MIILEQIMEIKILNKHGKSLRSIAREVGVSVNTVRKYLKYDGSPKYKDRSELVTKLAPYKDYLSERIKSAHPVSLPGTVLFQEIKELGYTGGITQLRDYLRSIKPVAKQEDIIRFETASGKQMQVDWIEFRKGKDPLSAFVATLGFSRASYIEFVNNEKLITLIECHKRAFDYFGGVPEEVLYDNMKTVILDRDTYGPWDTPF
323763..325040                     PHAGE_Burkho_phi1026b: gp59; RF_0309; phage(gi38707949)                              4e-39               MLNAKNVNSNIPLKVALFTSLGSGLEYYDFVIYGMMAKYLSDIFFSVNDSISSMIQTFIVFAVGYLFRPFGGTIIGMIADTYGRKKTFVVVMLTMGFSTMGIGLLPTYNQIGIIAPIGLLVCRLCQGISLGAELPGATTIISEYAPTGKLGSVMLSSISIGALMATAMVATLNKLYSYQEIIEGAWRIPFICGGILAIISYYIRKNISETPEFLQEKNREQTDTNLLIPLKLLLSQNLVNIAIGLGLVFFHANLVIINLYFPVYLNKYFNYELVDIYSSMTISMITSFIFTIIFGWLSDYVSKLKILLCSLILFSIFLFVSFALLNKGTFWSLQIFFIIYQLFISLFFTSYMPILSRLFATKMRYTAIALIYNSAYSVASFIPVIASYLLEQYNSPLILGIFFIISIALSLISVITIQNKKINYY
complement(325405..327525)         PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; RF_0310; phage(gi9631364)     7e-07               MSNSNNKLDKNFDKALLCLEEEKYETAIKYFDKVLNQDPFLSSAYSNKAFALKQLCRIEEALEVLDTAIKINPKISGYYDNRGIVLSILGLYEEAIKSYDQALKLDSLDVLTFINKGWTLNNWGKYRKALSVLDKAIELDPTDIKAYANKAISLEKLGKFDEMVHMYNKALEINPNYSELYFDRAKALIDIGEKEKALIDINKAIEINPNEIEFYHKKGWILSELYKYDEAIECCDKIIEIDSLEPYGYFNKGSMLRLNKKYEEAIEAFNMAINLMPTEAELYYLKGRCLYELKRYKEAVKEFNKAIKFEPDISSYYYKGQALYRLKEYKKAIEAYNHALSYPQYDNYTYYFKALSLKKLERYEEAIEVFNEALKIDSKDERTLSAKGQVLNELMRYEEAIKVFDKAIRIDPKNRNAIYAKGEALAKLMRYEEAIKAFDKTIRIDPNYWKPYAKGWVYNRLAKYKNAINYFNKVIELGKAEAYTYYEIALASYNLKRYKTAIINYDKAIELGIKALDLKVSTYSTKGDCLYNIKNYEAALESYNKVIELDPANYVHYYDKAYTLDNLKRYEEALENYDKVILLNPSYSSAYINKADIFCKLKKYPKAIDCSNQALAIVTDDDAAYYNKGLALIKLQQYEEGIENLDKSIKLDPDYPYAYYYNAIALNKLKKPDLAIEYINKAIELAPKNKVYQKLYKELLNSARRS
327859..328122                     hypothetical protein; RF_0311                                                        N/A                 MVNIMSIKLDPYEQDIEDNFEKQQKIDDPALIALLQKAAKAHLNNKRSITIRVAEHDIEAIKIKASKHGLPYQTYLNMLIHSDATKL
328129..328413                     hypothetical protein; RF_0312                                                        N/A                 MTKFRYNHEKNAKLLLERNIGFDEIIQSINDGNLLGAKLHHDQEKYKGQQILYVKIIDQVYAVPFVEEEDNTIFLKTLYPSRKAKKEFLGNNTQ
complement(328455..328733)         PHAGE_Caulob_CcrRogue: putative tail protein; RF_0313; phage(gi414088957)            1e-09               MKRILQKIASIIAPPPKLTVSLHMVTFLWQSSKNIDLKMEVKSFSNRLVTLVLPMPFVISTGDEFTIIAGCDKASRTCIVKFNNIINFRGEP
complement(329513..330196)         PHAGE_Fowlpo_virus: Ankyrin repeat gene family protein; RF_0314; phage(gi9634892)     2e-09               MLIKNKYKHSMFPVNQNNIIEENEEIKFDLIDTDIEIPFNYLTYILNSTSYITPEILFDGFKVVLPFYQDVQLKPLFELAFDQDVNINSQNKDNGCTFLHYSVEDVKVLYDNIPQFLLEKGADPNIQNKDGNTPLHILINRDFFSSKEIYVAKLLIQYGADIELKNLLGWTPIQCFIQAGNIKLKALLQLVKACKDNDFSKLDITTKDIKEFLDWQISITPENSKFF

#### region 2 ####
354392..354403                     attL                                                                                 N/A                 TTTTTACTTAAA
356376..356388                     attL                                                                                 N/A                 TATTTATATTTTT
358801..359511                     PHAGE_Prochl_Syn1: phosphoribosylaminoimidazole-succinocarboxamide synthase; RF_0339; phage(gi326784002)     1e-30               MKTQLYKGSSKILYSAEEDFLLIMAFSDNVTLESGEIIEISGKGVLNNNISSFLMDKLEMNGIENHFIEKINMREQLIQYVEVFPVQVIISSVACGRFVKEFGMDEGYVFDKPIIDFKVRSREFKYPIVNEYQILNFGWLTRDEIKAVKEQALRIYDFLSGLFIGVGIRLVECKLEFGRVFNGEESIIMLTDEISPDNCRLWHINSNEKLGFELLENEPNKAFESYQLIADRLKEK
359753..361354                     hypothetical protein; RF_0340                                                        N/A                 MKIRFIIISFIALILVGWGYAAYKFEHQSKENIISILDEYGEYVTYDSIKVNKYGFSITLNKVMLKPIDFYFDEIVIRHIPFLNITKIDSYGNDVKITIAQDEKNIFYSPDHHTTIWFRKSLFNREPDYWKLSLSDNKSTLYSSLDAEKLAESDISNSVITNTKTSDNLNLLILDGENTVSFISENYRGNLYDKIFEFLRDKIANDSDTASFEYGLTKLDILNLPISYNSKLKLKYSDELLALGKLLIQNFSLNQKQDENMHAVIFMQMLGELVKGKPFLFSCDIERKGKVESYLYKLNIEKDKIFDFALNSKSTIEPSETYQKTAVEALGSYFSNGLNKRAELDKIFKLTSPITQEDGEKVMGVFAKINNSEFNLKGEFDPEAKKLSGKTNLVMDDFNFAIDIDMPNLDNPLNLESVIKLSDPNAFINNFVNYTDNAVIPVLNKMEGSKEFALNLGKQSSVIKQYGFRAIEAFSKNSELKDGESLVVDVKGKDTGLTFNDKAIDQIFGDARVLEFMNAMAQIEQERKQVVGK
complement(361731..362054)         integrase-like protein; RF_0341                                                      N/A                 MNITILLYMAWGDIDLQNKIWNISNIKKEKSRYLSLTDEAIQILYRRKQKSNSLWVFPAKNKINHMVKPTPTLRKIVKETGYKDLTFNNLSKTLEKLTDPLRASIKL
362753..363364                     PROPHAGE_Escher_CFT073: transposase; RF_0342; phage(gi26248360)                      8e-56               MIILEQIMEIKILNKHGKSLRSIAREVGVSVNTVRKYLKYDGSPKYKDRSELVTKLAPYKDYLSERIKSAHPVSLPGTVLFQEIKELGYTGGITQLRDYLRSIKPVAKQEDIIRFETASGKQMQVDWIEFRKGKDPLSAFVATLGFSRASYIEFVNNEKLITLIECHKRAFDYFGGVPEEVLYDNMKTVILDRDTYGPWDTPF
363339..363782                     PROPHAGE_Escher_CFT073: transposase; RF_0343; phage(gi26248360)                      5e-23               MVLGIHRFNKGMLDFAKHYSFRLKVCRPYRAQTKGKVERFNRYIRESFYNPLVTKLKTSELVLDVDTANSEVLKWLRDTANLRVHRTTGAIPAERLKLERNHLQPLPLDYSGSHPTVLEIMRDKGERFSTVSLQHSLCIYQSILEAL
363779..364579                     PROPHAGE_Escher_CFT073: transposase/IS protein; RF_0344; phage(gi26248359)           5e-75               MNLQHQRIEELCHSLNLMQIAENYLDIAQSSSKEDSSYTDFLESILKTELLARQHRSKSILTKMAGFPAIKTLDDFDYDFATGIKHKVLEGLRSLSFVERQENIILLGPSGVGKTHIAIALGYAATQCGIKTKFTTAADLMLILNAGLNQGNLDSIFKRVILPYKLLIIDEFGYLPLKPEQANLLFQVIAKRYEKGSIILTSNLPFGQWHNSLAQDSALTAAILDRLLHHSTILNIKGDSFRLKDKKKTGLVPIEIINKQEDNFMT
364624..365790                     PHAGE_Amsact_: leucine rich repeat gene family protein; RF_0345; phage(gi9964328)     3e-05               MLIKYLYHFSTGVDTEKHLLVKDGMLSAEEIESIISNYLLLEILASSYSRENNINEDRIIEARIIVRRLFEIARNYYEDDKQKGINELGAINYTKATYLLNENIQKSLKQKQLSFKDIDYVVGNELEKLCELIAGNSAILTLNNDQIHSSNDFFDLAILGRLEETLKKLSEDFTVNDERIKFYRTLTEENDKKFFFENWKLIKWFSDTITYEKLLQLLPSKKFLLDLLKDKNLYKLAEKMTIAKNELLEMSQEAQENYLKEIKIEDCLDVHLDSMNINTLRLVLESNTILTNISFNSDTNVIIETGKSLNIAGLLTIGSGSTLNISGEGTLTLGSNIVSKNIIENINYKGITPEILLNNTIALNLNFTEENIYNNSDTIILGNIDSEI
365976..367403                     PHAGE_Acanth_moumouvirus: ankyrin repeat protein; RF_0346; phage(gi441431956)        2e-05               MQKILLKGPDVSMKNKTPDIKEIKTLDELLSGPGEYFINAHGSEFFYKPTNLGLWGKIKSYFMPEPSYLSMSIFSDEDTTSVLDITLLNKIQNNTTENHCNIVHIFSCHSGAAQHHLDYVQGNMVLCTYNKACDANIILLAQNNYDARTKNDSSLIEYIRDNFHLLAASNFSISYKLDNQIHNFSLSAGKIKNMKSIEELLAFLHKKYEAFVKFYKNIHSEYHESYPEIFNLNIETEPKELAQAELIRVFSRVVTLETYNFNKSSLDKVKTMLNQKGLNTDLSIDKAIEKGNFKLLSCLLNYGNTKIASSNLNKAIEKGDLAILKAVLEHSTTKIESYSLDKAIEKGDLAILKAVLEHSTTKIESYSLDKAIEKGDLAILKAVLEHSTTKIEFYNLDKAIEKGDLDVLKAVLEHPTIEVNSYTISTAEETHNLEIIELVKNYSAVNTITSEETTIDTALTVVEEVPALGEGIEGA
complement(367899..368255)         ribonuclease P; RF_0347                                                              N/A                 MSITSLKNQKEFELINKLGKKFHERYFILVIAKKLPKIFLESKYNTFLGIKVSRKLNKKAVVRNKIKRRIRHLIRIIVSDSKLKAIKFAMIIIPRKGFEEINFSHLNCELSKIILRNI
complement(368275..368409)         50S ribosomal protein L34; RF_0348                                                   N/A                 MKRTFQPSNLVRKRRHGFRSRMATPTGRAILRKRRAKGRHKLSA
complement(368562..368915)         50S ribosomal protein L20; RF_0349                                                   N/A                 MTRAKSGKISKNRHKKILKLAKGYRGRANSCFRVAIEKVEKALQYAYRDRRNRKRDFRGLWIQRINAAVREHGLVYSQFMGALKKAEIDIDRKVLAELAVNNSDGFASIIEQAKAHI
complement(368936..369142)         50S ribosomal protein L35; RF_0350                                                   N/A                 MPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDGYNIKKYFLPYGIN
369344..370021                     PHAGE_Burkho_BcepGomr: BcepGomrgp37; RF_0351; phage(gi146329949)                     3e-27               MFGQNPKRSILNGDGTKLEVQSIFKTIQGEGIFVGCPAIFIRLGGCNLACNFCDTEFEDFKLVDIAEILNKVESLALNSKNEKSINLVVITGGEPMRQPIELLCQKLLDQDFKIQIETNGTLYRSLPNEVSIICSPKAGKNGYSKIREDLLPKISAVKFIIAKNILEYSLIPEVGQTSYNIPVFVQPMDQNDQSLNDENNELAVKLALESGARLSLQTHKFLGIE
370434..371045                     50S ribosomal protein L25/general stress protein Ctc; RF_0352                        N/A                 MSEILELEAKSRTEFGTGASRALRREGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFISQLINLTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLEEKTQKMEVPVVYEGKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFTTKKEFVLATIIGRRGAKTEAEGEQQAAEAGK
371329..371886                     peptidyl-tRNA hydrolase; RF_0353                                                     N/A                 MILVIGLGNPGKEYQYTRHNIGFIAIEKIANQYNSSFSIKKKFNCEIAETISDGQKIIFIKPTTYMNLSGKSVISVKTYYNIQSAKIFVIHDDIDLETGRIKFKTGGGNGGHNGLKSIDGVIGNNYNRIRVGVGRPQNNQDVADYVLNNFLKSEYETALQAIDRIANNFDLILENKLEEFKNKIV
372019..372447                     acetyltransferase; RF_0354                                                           N/A                 MTQDFEIVYAEEMDKTHRTIIIEALNKDAREKKGLVGDIESFSFSCLDQDKNFVAGISGMSSWGGFYIDSLFVNENIRNQNYGTLLMQKAEDLARERDCNFIHLVTMDFQAKPFYEKLGYKIEFAMHGYEKDSIMYYLRKDL
372444..373541                     GTP-dependent nucleic acid-binding protein EngD; RF_0355                             N/A                 MTLKLGIVGLPNVGKSTLFNALTASQLADAANYPFCTIEPNSSKVLVPDERLQRLANLAGSGKIIPSYIEFVDIAGLVKGASKGEGLGNKFLSHIREVDAILHVLRCFEDEDITHVHNKVDPIHDLEVIETELILADIESVEKRLATSEKRLKSGDKTMAEQIELLKEVYKVLADGKPARVLNEALGADNLKQLQLITSKPVLYICNVLEKDAAIGNEFTKLVAERAKKENAKSVVISSKIEAEIALLESMEEKEEFLKFIGLEETGLSKVIKEGYNLLNLKSFFTIGPKEAHSWTFKDGTLAPSAAGIIHTDFEKGFIRAEVIGYEDYINLGSEAKAKEVGKMRLEGKEYKMQDGDIVHFRFNV
373713..373967                     hypothetical protein; RF_0356                                                        N/A                 MKTILPDRSLKIQARLNFIVSQILDIAQDKIAMIILYGSFARGDWVRDLPNGYHSDTDILIILKKSKYKGHATLRLKDNIYKRF
374148..374489                     hypothetical protein; RF_0357                                                        N/A                 MPWSEMKEIAKDYYEEWFRSGCGFLIDCKYPLERGELNKSAFYLHQATESFYSSILLVFSNYKPKLHDIEELGGRAANYNSELWEVFPQANEEQKECFELLKKAYVDARYDKN
374871..376088                     bicyclomycin resistance protein; RF_0358                                             N/A                 MKIIAKIPAWMLLCLFILSPTTETIYTSGLPSLTKYFGIDGGITQTTSTLYFLGFALGILTLGRLSDIYGRRPIALLGLFIYVISSIISIFAVNIEMLMIARFVQAFGVSVGSVIGQAMARDSYQGSELSYVYASLSPWLLFIPSLGSSIGGYIIEYSSWHYVFVFFSLTGTILLALYYKVLPETNSYIDFSQSSKYFEVLQVIIKDKILWLYAFIIGAFNGIYYGFFIEAPFIFIDKMKVSSSFYGKLAFLLSFAAIFGGFLGGYLIKKRHVHDKKVMGLGFIFSLCGCILFAVNAFILEVVSASHSLAIAMIFVPMMIHMVGHNLLIPMTLRYALVDYAKVTGTAGSIFGAIYYVVIAAVTYLVSKIHSETISNFALLCFVLSISSAISFYCIWVLYKKKHKL
376128..376140                     attR                                                                                 N/A                 TATTTATATTTTT
376272..377855                     PHAGE_Deep_s_D6E: recombinase; RF_0359; phage(gi423262352)                           5e-21               MQKRKIAAKTIIISRVSTKRQQQSGYSLTVQTLDSKEYCTDNNLDILKIYEFAESATTGKRKKFMEAINFAASQKEIVAVVADKIARLQRSFNELEMLEKFINDEKIELHFCLDKVVIHKYSMSHERMKWNAGIIAAKYCADYARDNMNCSIKHKLHHGEWISIPPVGYLHNANTTKKGRDRIFIDPNRAPLIKRIFELYAKGIYTLPEILEKTKEWGLTNLRGNKGYLCTTYLLQIIQNPFYYGVMYYKKGDKYYPHLYEPIISKELFDKCAIVLKEGNKFKESNKDYIFRGLIKCANTGKVATSDTKQKTYANGNVGVWNYLRIWDVDNPKKSIYIPEKKVLDDIESVLISMQLEPKFLEKVINYIKNSIDIEQEYYKKRKQELEVESAEFKMRIDRIKDLFSDNTFSREEYEWKLLEYTQKYQEIKNEIEMCNKADDSTKLISLVKIASSAYQTFIDLIAEEKRKLINLIFFDLKHDAEKLHYKLRPPFGNFIDLSKRKWKDIMYDLLTTTNHRTQINDTFFYI
380230..380241                     attR                                                                                 N/A                 TTTTTACTTAAA